Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RNA5SP492-201ENST00000411330 114 ntBASIC2.86□□□□□ -1.95
HLA-CQ95604 SNORD4B-201ENST00000459083 72 ntBASIC2.86□□□□□ -1.95
HLA-CQ95604 MIR4658-201ENST00000584344 65 ntBASIC2.86□□□□□ -1.95
HLA-CQ95604 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-CQ95604 RNA5SP289-201ENST00000362332 137 ntBASIC2.85□□□□□ -1.95
HLA-CQ95604 AC019129.1-201ENST00000403786 261 ntBASIC2.85□□□□□ -1.95
HLA-CQ95604 RN7SKP123-201ENST00000410732 291 ntBASIC2.85□□□□□ -1.95
HLA-CQ95604 AC009474.2-201ENST00000451383 136 ntBASIC2.85□□□□□ -1.95
HLA-CQ95604 HMGN1P18-201ENST00000457642 277 ntBASIC2.85□□□□□ -1.95
HLA-CQ95604 RNA5SP217-201ENST00000515959 91 ntBASIC2.85□□□□□ -1.95
HLA-CQ95604 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-CQ95604 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-CQ95604 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-CQ95604 RNU6-1094P-201ENST00000362416 104 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 RNA5SP383-201ENST00000362934 120 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 RNU6-624P-201ENST00000363411 107 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 RNU6-1229P-201ENST00000364295 107 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 Y_RNA.545-201ENST00000384652 105 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 MIR563-201ENST00000385080 79 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 AC027119.1-201ENST00000440877 241 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 Y_RNA.648-201ENST00000459455 110 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 RNU7-41P-201ENST00000515917 61 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 RNA5SP458-201ENST00000516188 119 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 SNORA25.13-201ENST00000516395 103 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 RNU6-557P-201ENST00000516842 110 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 AL357312.1-201ENST00000603879 298 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.84□□□□□ -1.95
HLA-CQ95604 AC008163.1-202ENST00000636004 2889 ntBASIC2.84□□□□□ -1.96
HLA-CQ95604 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-CQ95604 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-CQ95604 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
HLA-CQ95604 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-CQ95604 MIR148B-201ENST00000362252 99 ntBASIC2.83□□□□□ -1.96
HLA-CQ95604 Y_RNA.57-201ENST00000362806 113 ntBASIC2.83□□□□□ -1.96
HLA-CQ95604 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.83□□□□□ -1.96
HLA-CQ95604 RNU6-380P-201ENST00000410207 107 ntBASIC2.83□□□□□ -1.96
HLA-CQ95604 RN7SKP223-201ENST00000410582 62 ntBASIC2.83□□□□□ -1.96
HLA-CQ95604 SNORD111.1-201ENST00000516421 86 ntBASIC2.83□□□□□ -1.96
HLA-CQ95604 SCARNA20.6-201ENST00000517251 106 ntBASIC2.83□□□□□ -1.96
HLA-CQ95604 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-CQ95604 AL353997.5-201ENST00000618886 171 ntBASIC2.83□□□□□ -1.96
HLA-CQ95604 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-CQ95604 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
HLA-CQ95604 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-CQ95604 MIR512-1-201ENST00000384913 84 ntBASIC2.82□□□□□ -1.96
HLA-CQ95604 RNA5SP344-201ENST00000411081 104 ntBASIC2.82□□□□□ -1.96
HLA-CQ95604 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-CQ95604 RN7SL633P-201ENST00000488974 297 ntBASIC2.82□□□□□ -1.96
HLA-CQ95604 SNORA31.25-201ENST00000517242 134 ntBASIC2.82□□□□□ -1.96
HLA-CQ95604 SNORA31.26-201ENST00000517250 137 ntBASIC2.82□□□□□ -1.96
HLA-CQ95604 AC090897.1-201ENST00000580909 226 ntBASIC2.82□□□□□ -1.96
HLA-CQ95604 MIR7111-201ENST00000619751 72 ntBASIC2.82□□□□□ -1.96
HLA-CQ95604 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-CQ95604 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
HLA-CQ95604 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-CQ95604 RNU6-203P-201ENST00000384038 104 ntBASIC2.81□□□□□ -1.96
HLA-CQ95604 AL161935.2-201ENST00000414627 60 ntBASIC2.81□□□□□ -1.96
HLA-CQ95604 SNORA64.4-201ENST00000516632 81 ntBASIC2.81□□□□□ -1.96
HLA-CQ95604 AC121758.2-201ENST00000553271 193 ntBASIC2.81□□□□□ -1.96
HLA-CQ95604 MIR4264-201ENST00000583520 66 ntBASIC2.81□□□□□ -1.96
HLA-CQ95604 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-CQ95604 U8.9-201ENST00000365667 134 ntBASIC2.8□□□□□ -1.96
HLA-CQ95604 AL356320.1-201ENST00000429616 163 ntBASIC2.8□□□□□ -1.96
HLA-CQ95604 RPS27P21-201ENST00000486977 252 ntBASIC2.8□□□□□ -1.96
HLA-CQ95604 Y_RNA.660-201ENST00000516002 120 ntBASIC2.8□□□□□ -1.96
HLA-CQ95604 AC245166.1-201ENST00000521012 253 ntBASIC2.8□□□□□ -1.96
HLA-CQ95604 AC138749.4-201ENST00000563970 127 ntBASIC2.8□□□□□ -1.96
HLA-CQ95604 SNORA4-201ENST00000584302 138 ntBASIC2.8□□□□□ -1.96
HLA-CQ95604 AC067747.1-201ENST00000608026 250 ntBASIC2.8□□□□□ -1.96
HLA-CQ95604 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-CQ95604 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-CQ95604 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-CQ95604 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-CQ95604 SNORD114-30-201ENST00000364448 72 ntBASIC2.79□□□□□ -1.96
HLA-CQ95604 RNU6-396P-201ENST00000365369 105 ntBASIC2.79□□□□□ -1.96
HLA-CQ95604 MT-TN-201ENST00000387400 73 ntBASIC2.79□□□□□ -1.96
HLA-CQ95604 AC244023.1-201ENST00000426884 112 ntBASIC2.79□□□□□ -1.96
HLA-CQ95604 RNU6-850P-201ENST00000516934 103 ntBASIC2.79□□□□□ -1.96
HLA-CQ95604 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-CQ95604 AC242498.1-201ENST00000604134 111 ntBASIC2.79□□□□□ -1.96
HLA-CQ95604 U4.3-201ENST00000621047 82 ntBASIC2.79□□□□□ -1.96
HLA-CQ95604 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-CQ95604 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-CQ95604 Y_RNA.164-201ENST00000363709 102 ntBASIC2.78□□□□□ -1.96
HLA-CQ95604 snoU13.11-201ENST00000459219 104 ntBASIC2.78□□□□□ -1.96
HLA-CQ95604 RNA5SP282-201ENST00000516355 108 ntBASIC2.78□□□□□ -1.96
HLA-CQ95604 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-CQ95604 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-CQ95604 Y_RNA.565-201ENST00000384719 101 ntBASIC2.77□□□□□ -1.97
HLA-CQ95604 MIR588-201ENST00000384900 83 ntBASIC2.77□□□□□ -1.97
HLA-CQ95604 MIR889-201ENST00000401280 79 ntBASIC2.77□□□□□ -1.97
HLA-CQ95604 RNU1-143P-201ENST00000516296 146 ntBASIC2.77□□□□□ -1.97
HLA-CQ95604 PRELID3BP2-201ENST00000605362 201 ntBASIC2.77□□□□□ -1.97
HLA-CQ95604 U1.23-201ENST00000610293 146 ntBASIC2.77□□□□□ -1.97
HLA-CQ95604 AL096861.1-201ENST00000610899 123 ntBASIC2.77□□□□□ -1.97
HLA-CQ95604 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.77□□□□□ -1.97
HLA-CQ95604 RNU1-68P-201ENST00000615382 146 ntBASIC2.77□□□□□ -1.97
HLA-CQ95604 U1.39-201ENST00000621562 146 ntBASIC2.77□□□□□ -1.97
HLA-CQ95604 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HLA-CQ95604 SNORD114-1-201ENST00000362705 72 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms