Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 Y_RNA.4-201ENST00000362333 112 ntBASIC2.89□□□□□ -1.95
CLCN1P35523 SNORA67.1-201ENST00000364749 141 ntBASIC2.89□□□□□ -1.95
CLCN1P35523 RNU6-787P-201ENST00000384032 107 ntBASIC2.89□□□□□ -1.95
CLCN1P35523 AL161935.2-201ENST00000414627 60 ntBASIC2.89□□□□□ -1.95
CLCN1P35523 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLCN1P35523 AC087499.2-201ENST00000432861 149 ntBASIC2.89□□□□□ -1.95
CLCN1P35523 AL033523.1-201ENST00000605153 153 ntBASIC2.89□□□□□ -1.95
CLCN1P35523 AC245884.12-201ENST00000615364 59 ntBASIC2.89□□□□□ -1.95
CLCN1P35523 AL662814.1-201ENST00000617364 121 ntBASIC2.89□□□□□ -1.95
CLCN1P35523 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CLCN1P35523 RNU6-439P-201ENST00000384188 106 ntBASIC2.88□□□□□ -1.95
CLCN1P35523 MIR4666B-201ENST00000578142 81 ntBASIC2.88□□□□□ -1.95
CLCN1P35523 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.87□□□□□ -1.95
CLCN1P35523 RNU6-509P-201ENST00000363519 107 ntBASIC2.87□□□□□ -1.95
CLCN1P35523 Y_RNA.173-201ENST00000363776 113 ntBASIC2.87□□□□□ -1.95
CLCN1P35523 SNORA6-201ENST00000384033 151 ntBASIC2.87□□□□□ -1.95
CLCN1P35523 SNORD41-201ENST00000386967 70 ntBASIC2.87□□□□□ -1.95
CLCN1P35523 RNA5SP212-201ENST00000391223 107 ntBASIC2.87□□□□□ -1.95
CLCN1P35523 SNORD23.1-201ENST00000408212 104 ntBASIC2.87□□□□□ -1.95
CLCN1P35523 RNA5SP21-201ENST00000410917 96 ntBASIC2.87□□□□□ -1.95
CLCN1P35523 MIR4435-1-201ENST00000582552 80 ntBASIC2.87□□□□□ -1.95
CLCN1P35523 MIR4635-201ENST00000583759 79 ntBASIC2.87□□□□□ -1.95
CLCN1P35523 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.87□□□□□ -1.95
CLCN1P35523 MIR524-201ENST00000385242 87 ntBASIC2.86□□□□□ -1.95
CLCN1P35523 MIR3945-201ENST00000581853 98 ntBASIC2.86□□□□□ -1.95
CLCN1P35523 AC025521.1-201ENST00000621624 286 ntBASIC2.86□□□□□ -1.95
CLCN1P35523 MIR548BB-201ENST00000626714 66 ntBASIC2.86□□□□□ -1.95
CLCN1P35523 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLCN1P35523 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
CLCN1P35523 RNU6-1125P-201ENST00000363601 107 ntBASIC2.85□□□□□ -1.95
CLCN1P35523 Y_RNA.313-201ENST00000365095 103 ntBASIC2.85□□□□□ -1.95
CLCN1P35523 RNU6-480P-201ENST00000384332 107 ntBASIC2.85□□□□□ -1.95
CLCN1P35523 RNA5SP395-201ENST00000516567 118 ntBASIC2.85□□□□□ -1.95
CLCN1P35523 AL357312.1-201ENST00000603879 298 ntBASIC2.85□□□□□ -1.95
CLCN1P35523 PRELID3BP2-201ENST00000605362 201 ntBASIC2.85□□□□□ -1.95
CLCN1P35523 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.85□□□□□ -1.95
CLCN1P35523 AC006160.2-201ENST00000637708 154 ntBASIC2.85□□□□□ -1.95
CLCN1P35523 RNU6-633P-201ENST00000362612 103 ntBASIC2.84□□□□□ -1.95
CLCN1P35523 MIR181B2-201ENST00000385004 89 ntBASIC2.84□□□□□ -1.95
CLCN1P35523 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.84□□□□□ -1.95
CLCN1P35523 AC244023.1-201ENST00000426884 112 ntBASIC2.84□□□□□ -1.95
CLCN1P35523 RPS29P11-201ENST00000496507 171 ntBASIC2.84□□□□□ -1.95
CLCN1P35523 AL513043.2-201ENST00000573941 143 ntBASIC2.84□□□□□ -1.95
CLCN1P35523 MIR3192-201ENST00000584920 77 ntBASIC2.84□□□□□ -1.95
CLCN1P35523 AC242498.1-201ENST00000604134 111 ntBASIC2.84□□□□□ -1.95
CLCN1P35523 AP000553.5-201ENST00000641933 54 ntBASIC2.84□□□□□ -1.95
CLCN1P35523 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLCN1P35523 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CLCN1P35523 WWP1P1-201ENST00000466609 2769 ntBASIC2.83□□□□□ -1.96
CLCN1P35523 RNU6-949P-201ENST00000384040 107 ntBASIC2.83□□□□□ -1.96
CLCN1P35523 MIR588-201ENST00000384900 83 ntBASIC2.83□□□□□ -1.96
CLCN1P35523 MIR9-1-201ENST00000385198 89 ntBASIC2.83□□□□□ -1.96
CLCN1P35523 snoU13.2-201ENST00000459201 104 ntBASIC2.83□□□□□ -1.96
CLCN1P35523 RNA5SP356-201ENST00000515972 94 ntBASIC2.83□□□□□ -1.96
CLCN1P35523 GTF3AP2-201ENST00000557014 266 ntBASIC2.83□□□□□ -1.96
CLCN1P35523 AC067747.1-201ENST00000608026 250 ntBASIC2.83□□□□□ -1.96
CLCN1P35523 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLCN1P35523 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CLCN1P35523 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLCN1P35523 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.82□□□□□ -1.96
CLCN1P35523 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CLCN1P35523 RNA5SP282-201ENST00000516355 108 ntBASIC2.82□□□□□ -1.96
CLCN1P35523 MIR3162-201ENST00000581818 82 ntBASIC2.82□□□□□ -1.96
CLCN1P35523 AL096861.1-201ENST00000610899 123 ntBASIC2.82□□□□□ -1.96
CLCN1P35523 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.82□□□□□ -1.96
CLCN1P35523 SNORA25.3-201ENST00000363205 127 ntBASIC2.81□□□□□ -1.96
CLCN1P35523 Y_RNA.244-201ENST00000364484 109 ntBASIC2.81□□□□□ -1.96
CLCN1P35523 RNY1P2-201ENST00000364820 117 ntBASIC2.81□□□□□ -1.96
CLCN1P35523 RNU6-396P-201ENST00000365369 105 ntBASIC2.81□□□□□ -1.96
CLCN1P35523 SNORA2B-201ENST00000384583 137 ntBASIC2.81□□□□□ -1.96
CLCN1P35523 RNU6-279P-201ENST00000391297 101 ntBASIC2.81□□□□□ -1.96
CLCN1P35523 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.81□□□□□ -1.96
CLCN1P35523 AL161932.1-201ENST00000437408 146 ntBASIC2.81□□□□□ -1.96
CLCN1P35523 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLCN1P35523 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLCN1P35523 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CLCN1P35523 MIR21-201ENST00000362134 72 ntBASIC2.8□□□□□ -1.96
CLCN1P35523 MIR1261-201ENST00000408659 82 ntBASIC2.8□□□□□ -1.96
CLCN1P35523 HMGN2P38-201ENST00000423806 265 ntBASIC2.8□□□□□ -1.96
CLCN1P35523 AC090255.1-201ENST00000495779 349 ntBASIC2.8□□□□□ -1.96
CLCN1P35523 AC020891.4-201ENST00000605745 93 ntBASIC2.8□□□□□ -1.96
CLCN1P35523 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CLCN1P35523 HSBP1P2-201ENST00000299671 229 ntBASIC2.79□□□□□ -1.96
CLCN1P35523 Y_RNA.168-201ENST00000363740 102 ntBASIC2.79□□□□□ -1.96
CLCN1P35523 RNU6-613P-201ENST00000410412 108 ntBASIC2.79□□□□□ -1.96
CLCN1P35523 HSPE1P24-201ENST00000450782 238 ntBASIC2.79□□□□□ -1.96
CLCN1P35523 AC104435.1-201ENST00000483483 166 ntBASIC2.79□□□□□ -1.96
CLCN1P35523 RPS27P21-201ENST00000486977 252 ntBASIC2.79□□□□□ -1.96
CLCN1P35523 RNU6-947P-201ENST00000516264 106 ntBASIC2.79□□□□□ -1.96
CLCN1P35523 AC090897.1-201ENST00000580909 226 ntBASIC2.79□□□□□ -1.96
CLCN1P35523 AP000942.3-201ENST00000603702 160 ntBASIC2.79□□□□□ -1.96
CLCN1P35523 AP000753.3-201ENST00000604083 169 ntBASIC2.79□□□□□ -1.96
CLCN1P35523 MIR6840-201ENST00000611937 71 ntBASIC2.79□□□□□ -1.96
CLCN1P35523 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.79□□□□□ -1.96
CLCN1P35523 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLCN1P35523 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLCN1P35523 RNU6-652P-201ENST00000365488 107 ntBASIC2.78□□□□□ -1.96
CLCN1P35523 RNA5SP508-201ENST00000411327 119 ntBASIC2.78□□□□□ -1.96
CLCN1P35523 GHRLOS.1-201ENST00000610995 70 ntBASIC2.78□□□□□ -1.96
CLCN1P35523 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 269 ms