Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 MIR490-201ENST00000384865 128 ntBASIC4.95□□□□□ -1.62
MSH5O43196 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
MSH5O43196 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
MSH5O43196 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
MSH5O43196 RNU6V-201ENST00000384105 107 ntBASIC4.94□□□□□ -1.62
MSH5O43196 MIR18B-201ENST00000454574 71 ntBASIC4.94□□□□□ -1.62
MSH5O43196 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
MSH5O43196 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MSH5O43196 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MSH5O43196 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
MSH5O43196 BX510359.4-201ENST00000423750 193 ntBASIC4.93□□□□□ -1.62
MSH5O43196 AC115115.1-201ENST00000449927 248 ntBASIC4.93□□□□□ -1.62
MSH5O43196 RN7SL330P-201ENST00000469709 307 ntBASIC4.93□□□□□ -1.62
MSH5O43196 RN7SL601P-201ENST00000471221 293 ntBASIC4.93□□□□□ -1.62
MSH5O43196 MIR2115-201ENST00000516657 100 ntBASIC4.93□□□□□ -1.62
MSH5O43196 RNU6-548P-201ENST00000517083 115 ntBASIC4.93□□□□□ -1.62
MSH5O43196 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
MSH5O43196 RNVU1-4-201ENST00000612985 164 ntBASIC4.93□□□□□ -1.62
MSH5O43196 MIR6852-201ENST00000621699 66 ntBASIC4.93□□□□□ -1.62
MSH5O43196 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.93□□□□□ -1.62
MSH5O43196 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
MSH5O43196 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MSH5O43196 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
MSH5O43196 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MSH5O43196 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
MSH5O43196 RNU6-172P-201ENST00000411000 93 ntBASIC4.92□□□□□ -1.62
MSH5O43196 AC003685.2-201ENST00000422795 395 ntBASIC4.92□□□□□ -1.62
MSH5O43196 RPS27P29-201ENST00000463110 252 ntBASIC4.92□□□□□ -1.62
MSH5O43196 RN7SKP83-201ENST00000516512 178 ntBASIC4.92□□□□□ -1.62
MSH5O43196 MIR5187-201ENST00000583479 76 ntBASIC4.92□□□□□ -1.62
MSH5O43196 MIR3192-201ENST00000584920 77 ntBASIC4.92□□□□□ -1.62
MSH5O43196 AC008608.1-201ENST00000603910 127 ntBASIC4.92□□□□□ -1.62
MSH5O43196 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
MSH5O43196 RNU6-742P-201ENST00000365289 107 ntBASIC4.91□□□□□ -1.62
MSH5O43196 RNU6-322P-201ENST00000516010 103 ntBASIC4.91□□□□□ -1.62
MSH5O43196 MIR4513-201ENST00000581077 86 ntBASIC4.91□□□□□ -1.62
MSH5O43196 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.91□□□□□ -1.62
MSH5O43196 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
MSH5O43196 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
MSH5O43196 RNU6-765P-201ENST00000516916 99 ntBASIC4.9□□□□□ -1.63
MSH5O43196 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
MSH5O43196 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MSH5O43196 Y_RNA.500-201ENST00000384466 111 ntBASIC4.89□□□□□ -1.63
MSH5O43196 RNU7-185P-201ENST00000459215 60 ntBASIC4.89□□□□□ -1.63
MSH5O43196 SNORA70.14-201ENST00000516205 110 ntBASIC4.89□□□□□ -1.63
MSH5O43196 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
MSH5O43196 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
MSH5O43196 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
MSH5O43196 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.88□□□□□ -1.63
MSH5O43196 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
MSH5O43196 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
MSH5O43196 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.88□□□□□ -1.63
MSH5O43196 MIR597-201ENST00000384968 97 ntBASIC4.88□□□□□ -1.63
MSH5O43196 AC067940.1-201ENST00000458411 300 ntBASIC4.88□□□□□ -1.63
MSH5O43196 MIR4425-201ENST00000580572 84 ntBASIC4.88□□□□□ -1.63
MSH5O43196 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.87□□□□□ -1.63
MSH5O43196 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
MSH5O43196 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.87□□□□□ -1.63
MSH5O43196 AL356274.2-201ENST00000624379 3752 ntBASIC4.87□□□□□ -1.63
MSH5O43196 MIR1251-201ENST00000408552 70 ntBASIC4.87□□□□□ -1.63
MSH5O43196 AC083863.1-201ENST00000438811 231 ntBASIC4.87□□□□□ -1.63
MSH5O43196 AP004217.1-201ENST00000480579 346 ntBASIC4.87□□□□□ -1.63
MSH5O43196 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.87□□□□□ -1.63
MSH5O43196 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.87□□□□□ -1.63
MSH5O43196 Y_RNA.125-201ENST00000363371 111 ntBASIC4.86□□□□□ -1.63
MSH5O43196 SNORA38.1-201ENST00000364172 131 ntBASIC4.86□□□□□ -1.63
MSH5O43196 SNORD6-201ENST00000365444 73 ntBASIC4.86□□□□□ -1.63
MSH5O43196 RNU6-220P-201ENST00000390919 107 ntBASIC4.86□□□□□ -1.63
MSH5O43196 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.86□□□□□ -1.63
MSH5O43196 SNORA31.15-201ENST00000516771 132 ntBASIC4.86□□□□□ -1.63
MSH5O43196 AC093908.1-201ENST00000623125 8092 ntBASIC4.86□□□□□ -1.63
MSH5O43196 ZNF658B-202ENST00000615961 3375 ntBASIC4.86□□□□□ -1.63
MSH5O43196 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.86□□□□□ -1.63
MSH5O43196 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MSH5O43196 MIR1257-201ENST00000408490 117 ntBASIC4.85□□□□□ -1.63
MSH5O43196 RNA5SP120-201ENST00000410900 112 ntBASIC4.85□□□□□ -1.63
MSH5O43196 AL513328.1-201ENST00000446460 224 ntBASIC4.85□□□□□ -1.63
MSH5O43196 AC108206.1-201ENST00000570186 4159 ntBASIC4.85□□□□□ -1.63
MSH5O43196 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MSH5O43196 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.84□□□□□ -1.63
MSH5O43196 RNA5SP95-201ENST00000410319 137 ntBASIC4.84□□□□□ -1.63
MSH5O43196 RN7SL594P-201ENST00000470590 287 ntBASIC4.84□□□□□ -1.63
MSH5O43196 UBE2DNL-203ENST00000474922 222 ntBASIC4.84□□□□□ -1.63
MSH5O43196 RN7SL274P-201ENST00000492268 272 ntBASIC4.84□□□□□ -1.63
MSH5O43196 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.84□□□□□ -1.63
MSH5O43196 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.84□□□□□ -1.63
MSH5O43196 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.84□□□□□ -1.63
MSH5O43196 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MSH5O43196 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.83□□□□□ -1.64
MSH5O43196 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
MSH5O43196 AC026271.5-201ENST00000577873 130 ntBASIC4.83□□□□□ -1.64
MSH5O43196 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
MSH5O43196 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.82□□□□□ -1.64
MSH5O43196 SNORA33.1-201ENST00000364957 130 ntBASIC4.82□□□□□ -1.64
MSH5O43196 RNU6-133P-201ENST00000383989 107 ntBASIC4.82□□□□□ -1.64
MSH5O43196 RNU6-535P-201ENST00000384722 107 ntBASIC4.82□□□□□ -1.64
MSH5O43196 RNU6-59P-201ENST00000384787 107 ntBASIC4.82□□□□□ -1.64
MSH5O43196 RNVU1-2-201ENST00000516326 135 ntBASIC4.82□□□□□ -1.64
MSH5O43196 MIR5047-201ENST00000579212 100 ntBASIC4.82□□□□□ -1.64
MSH5O43196 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms