Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MIR6715A-201ENST00000615929 79 ntBASIC2.87□□□□□ -1.95
H3BM21 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
H3BM21 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.87□□□□□ -1.95
H3BM21 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
H3BM21 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
H3BM21 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
H3BM21 Y_RNA.236-201ENST00000364427 111 ntBASIC2.86□□□□□ -1.95
H3BM21 RNA5SP237-201ENST00000410414 113 ntBASIC2.86□□□□□ -1.95
H3BM21 RNA5SP184-201ENST00000411071 108 ntBASIC2.86□□□□□ -1.95
H3BM21 BX276092.1-201ENST00000427368 251 ntBASIC2.86□□□□□ -1.95
H3BM21 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
H3BM21 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.86□□□□□ -1.95
H3BM21 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
H3BM21 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
H3BM21 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
H3BM21 RNU6-829P-201ENST00000363700 112 ntBASIC2.85□□□□□ -1.95
H3BM21 RNU6-340P-201ENST00000364005 107 ntBASIC2.85□□□□□ -1.95
H3BM21 Y_RNA.371-201ENST00000365591 113 ntBASIC2.85□□□□□ -1.95
H3BM21 RNU6-466P-201ENST00000391224 103 ntBASIC2.85□□□□□ -1.95
H3BM21 MIR3169-201ENST00000578032 83 ntBASIC2.85□□□□□ -1.95
H3BM21 MIR3162-201ENST00000581818 82 ntBASIC2.85□□□□□ -1.95
H3BM21 AC108206.1-201ENST00000570186 4159 ntBASIC2.85□□□□□ -1.95
H3BM21 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
H3BM21 RNU1-109P-201ENST00000383960 147 ntBASIC2.84□□□□□ -1.95
H3BM21 MIR526A1-201ENST00000384897 85 ntBASIC2.84□□□□□ -1.95
H3BM21 MIR518E-201ENST00000385252 88 ntBASIC2.84□□□□□ -1.95
H3BM21 RNU6-243P-201ENST00000391140 107 ntBASIC2.84□□□□□ -1.95
H3BM21 RNU6-1254P-201ENST00000391266 104 ntBASIC2.84□□□□□ -1.95
H3BM21 AC138749.4-201ENST00000563970 127 ntBASIC2.84□□□□□ -1.95
H3BM21 MIR3675-201ENST00000583661 73 ntBASIC2.84□□□□□ -1.95
H3BM21 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.84□□□□□ -1.95
H3BM21 RNU6-23P-201ENST00000363283 107 ntBASIC2.83□□□□□ -1.96
H3BM21 SNORD116-24-201ENST00000384549 92 ntBASIC2.83□□□□□ -1.96
H3BM21 MIR516A2-201ENST00000384888 90 ntBASIC2.83□□□□□ -1.96
H3BM21 MIR516A1-201ENST00000385033 90 ntBASIC2.83□□□□□ -1.96
H3BM21 MIR4319-201ENST00000577285 85 ntBASIC2.83□□□□□ -1.96
H3BM21 MIR8053-201ENST00000613344 75 ntBASIC2.83□□□□□ -1.96
H3BM21 AC022513.1-201ENST00000624512 117 ntBASIC2.83□□□□□ -1.96
H3BM21 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.83□□□□□ -1.96
H3BM21 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
H3BM21 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
H3BM21 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
H3BM21 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
H3BM21 RNU6-1216P-201ENST00000362590 107 ntBASIC2.82□□□□□ -1.96
H3BM21 Y_RNA.42-201ENST00000362660 108 ntBASIC2.82□□□□□ -1.96
H3BM21 SNORD115-3-201ENST00000363100 82 ntBASIC2.82□□□□□ -1.96
H3BM21 RNU6-461P-201ENST00000364195 107 ntBASIC2.82□□□□□ -1.96
H3BM21 SNORD115-22-201ENST00000364456 82 ntBASIC2.82□□□□□ -1.96
H3BM21 SNORA25B-201ENST00000365507 128 ntBASIC2.82□□□□□ -1.96
H3BM21 AP004217.1-201ENST00000480579 346 ntBASIC2.82□□□□□ -1.96
H3BM21 WWP1P1-201ENST00000466609 2769 ntBASIC2.82□□□□□ -1.96
H3BM21 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.81□□□□□ -1.96
H3BM21 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
H3BM21 Y_RNA.207-201ENST00000364142 106 ntBASIC2.81□□□□□ -1.96
H3BM21 RNU6-949P-201ENST00000384040 107 ntBASIC2.81□□□□□ -1.96
H3BM21 MIR512-1-201ENST00000384913 84 ntBASIC2.81□□□□□ -1.96
H3BM21 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
H3BM21 AL662814.1-201ENST00000617364 121 ntBASIC2.81□□□□□ -1.96
H3BM21 AC069503.3-201ENST00000618674 145 ntBASIC2.81□□□□□ -1.96
H3BM21 U6.109-201ENST00000636749 87 ntBASIC2.81□□□□□ -1.96
H3BM21 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
H3BM21 AC062016.1-201ENST00000355719 319 ntBASIC2.8□□□□□ -1.96
H3BM21 SNORD45.1-201ENST00000363181 77 ntBASIC2.8□□□□□ -1.96
H3BM21 RNU6-1051P-201ENST00000365471 102 ntBASIC2.8□□□□□ -1.96
H3BM21 RNU6-950P-201ENST00000384651 107 ntBASIC2.8□□□□□ -1.96
H3BM21 MIR2113-201ENST00000459007 91 ntBASIC2.8□□□□□ -1.96
H3BM21 MIR4764-201ENST00000580680 88 ntBASIC2.8□□□□□ -1.96
H3BM21 MIR3616-201ENST00000584070 92 ntBASIC2.8□□□□□ -1.96
H3BM21 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.8□□□□□ -1.96
H3BM21 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
H3BM21 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
H3BM21 SNORD38B-201ENST00000384690 67 ntBASIC2.79□□□□□ -1.96
H3BM21 RNU6-1031P-201ENST00000384773 107 ntBASIC2.79□□□□□ -1.96
H3BM21 MIR627-201ENST00000384979 97 ntBASIC2.79□□□□□ -1.96
H3BM21 RNU6-220P-201ENST00000390919 107 ntBASIC2.79□□□□□ -1.96
H3BM21 Y_RNA.722-201ENST00000517279 114 ntBASIC2.79□□□□□ -1.96
H3BM21 AC008133.2-201ENST00000624540 351 ntBASIC2.79□□□□□ -1.96
H3BM21 SNORD38B-202ENST00000625943 69 ntBASIC2.79□□□□□ -1.96
H3BM21 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.79□□□□□ -1.96
H3BM21 ZNF209P-201ENST00000593450 2304 ntBASIC2.79□□□□□ -1.96
H3BM21 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
H3BM21 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
H3BM21 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
H3BM21 RNU6-859P-201ENST00000362728 107 ntBASIC2.78□□□□□ -1.96
H3BM21 Y_RNA.119-201ENST00000363301 96 ntBASIC2.78□□□□□ -1.96
H3BM21 RNU6-957P-201ENST00000363652 99 ntBASIC2.78□□□□□ -1.96
H3BM21 MIR196B-201ENST00000384852 84 ntBASIC2.78□□□□□ -1.96
H3BM21 AC245517.4-201ENST00000448601 281 ntBASIC2.78□□□□□ -1.96
H3BM21 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.77□□□□□ -1.97
H3BM21 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
H3BM21 SNORD113.1-201ENST00000363280 73 ntBASIC2.77□□□□□ -1.97
H3BM21 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
H3BM21 HMGN2P39-201ENST00000398005 273 ntBASIC2.77□□□□□ -1.97
H3BM21 AC019129.1-201ENST00000403786 261 ntBASIC2.77□□□□□ -1.97
H3BM21 SNORD109B-201ENST00000458961 67 ntBASIC2.77□□□□□ -1.97
H3BM21 SNORD109A-201ENST00000459128 67 ntBASIC2.77□□□□□ -1.97
H3BM21 SNORA74.3-201ENST00000517108 154 ntBASIC2.77□□□□□ -1.97
H3BM21 AC079600.2-201ENST00000550076 130 ntBASIC2.77□□□□□ -1.97
H3BM21 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.77□□□□□ -1.97
H3BM21 MIR548AO-201ENST00000579992 96 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 208.2 ms