Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU6-402P-201ENST00000410678 103 ntBASIC3.02□□□□□ -1.93
ZC3H4Q9UPT8 RNA5SP501-201ENST00000410990 112 ntBASIC3.02□□□□□ -1.93
ZC3H4Q9UPT8 AC245047.7-201ENST00000440265 293 ntBASIC3.02□□□□□ -1.93
ZC3H4Q9UPT8 RPL23AP6-201ENST00000446637 472 ntBASIC3.02□□□□□ -1.93
ZC3H4Q9UPT8 RNA5SP481-201ENST00000516814 122 ntBASIC3.02□□□□□ -1.93
ZC3H4Q9UPT8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.02□□□□□ -1.93
ZC3H4Q9UPT8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.02□□□□□ -1.93
ZC3H4Q9UPT8 RNU6-1313P-201ENST00000362622 102 ntBASIC3.01□□□□□ -1.93
ZC3H4Q9UPT8 RNU6-228P-201ENST00000362700 106 ntBASIC3.01□□□□□ -1.93
ZC3H4Q9UPT8 Y_RNA.430-201ENST00000384081 110 ntBASIC3.01□□□□□ -1.93
ZC3H4Q9UPT8 SNORD116-22-201ENST00000384430 92 ntBASIC3.01□□□□□ -1.93
ZC3H4Q9UPT8 HMGN2P39-201ENST00000398005 273 ntBASIC3.01□□□□□ -1.93
ZC3H4Q9UPT8 AL451046.2-201ENST00000403074 277 ntBASIC3.01□□□□□ -1.93
ZC3H4Q9UPT8 MIR376B-201ENST00000614515 100 ntBASIC3.01□□□□□ -1.93
ZC3H4Q9UPT8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.01□□□□□ -1.93
ZC3H4Q9UPT8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ZC3H4Q9UPT8 RNU6-112P-201ENST00000363599 104 ntBASIC3□□□□□ -1.93
ZC3H4Q9UPT8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3□□□□□ -1.93
ZC3H4Q9UPT8 RNU6-972P-201ENST00000391208 107 ntBASIC3□□□□□ -1.93
ZC3H4Q9UPT8 MIR4498-201ENST00000577599 66 ntBASIC3□□□□□ -1.93
ZC3H4Q9UPT8 MIR3202-2-201ENST00000635980 79 ntBASIC3□□□□□ -1.93
ZC3H4Q9UPT8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3□□□□□ -1.93
ZC3H4Q9UPT8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
ZC3H4Q9UPT8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.99□□□□□ -1.93
ZC3H4Q9UPT8 RNU6-342P-201ENST00000384521 104 ntBASIC2.99□□□□□ -1.93
ZC3H4Q9UPT8 SUB1P4-201ENST00000566062 339 ntBASIC2.99□□□□□ -1.93
ZC3H4Q9UPT8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
ZC3H4Q9UPT8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ZC3H4Q9UPT8 SNORD115-35-201ENST00000365122 82 ntBASIC2.98□□□□□ -1.93
ZC3H4Q9UPT8 RNU6-1276P-201ENST00000365372 104 ntBASIC2.98□□□□□ -1.93
ZC3H4Q9UPT8 Y_RNA.537-201ENST00000384626 109 ntBASIC2.98□□□□□ -1.93
ZC3H4Q9UPT8 MIR1287-201ENST00000408492 90 ntBASIC2.98□□□□□ -1.93
ZC3H4Q9UPT8 AC099513.1-201ENST00000490423 301 ntBASIC2.98□□□□□ -1.93
ZC3H4Q9UPT8 RNU7-2P-201ENST00000516096 62 ntBASIC2.98□□□□□ -1.93
ZC3H4Q9UPT8 AC010297.1-201ENST00000623948 149 ntBASIC2.98□□□□□ -1.93
ZC3H4Q9UPT8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.98□□□□□ -1.93
ZC3H4Q9UPT8 RNU6-457P-201ENST00000363999 107 ntBASIC2.97□□□□□ -1.93
ZC3H4Q9UPT8 MIR1255A-201ENST00000408338 113 ntBASIC2.97□□□□□ -1.93
ZC3H4Q9UPT8 snoU13.16-201ENST00000459350 104 ntBASIC2.97□□□□□ -1.93
ZC3H4Q9UPT8 SNORA31.25-201ENST00000517242 134 ntBASIC2.97□□□□□ -1.93
ZC3H4Q9UPT8 MIR1291-201ENST00000627649 87 ntBASIC2.97□□□□□ -1.93
ZC3H4Q9UPT8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.97□□□□□ -1.93
ZC3H4Q9UPT8 RNU6-296P-201ENST00000384608 107 ntBASIC2.96□□□□□ -1.93
ZC3H4Q9UPT8 RNU2-40P-201ENST00000410833 196 ntBASIC2.96□□□□□ -1.93
ZC3H4Q9UPT8 RPS29P28-201ENST00000446439 141 ntBASIC2.96□□□□□ -1.93
ZC3H4Q9UPT8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ZC3H4Q9UPT8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 RNA5SP456-201ENST00000364002 114 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 Y_RNA.247-201ENST00000364500 92 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 RNU1-51P-201ENST00000365345 176 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 RNU6-813P-201ENST00000384691 107 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 MIR206-201ENST00000384872 86 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 U8.15-201ENST00000390947 134 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 AC090844.1-201ENST00000422019 156 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 RNA5SP82-201ENST00000516707 92 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 RNU6-267P-201ENST00000516714 103 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 SNORA74.3-201ENST00000517108 154 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 RNU2-19P-201ENST00000517288 84 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 MIR3670-2-201ENST00000582974 65 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 MIR3670-1-201ENST00000584160 65 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 MIR3670-3-201ENST00000584855 65 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 MIR3670-4-201ENST00000612260 65 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 U1.36-201ENST00000620684 176 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 MIR6873-201ENST00000622788 63 ntBASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
ZC3H4Q9UPT8 MIR424-201ENST00000362227 98 ntBASIC2.94□□□□□ -1.94
ZC3H4Q9UPT8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
ZC3H4Q9UPT8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.94□□□□□ -1.94
ZC3H4Q9UPT8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
ZC3H4Q9UPT8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.94□□□□□ -1.94
ZC3H4Q9UPT8 RNU6-1053P-201ENST00000515930 101 ntBASIC2.94□□□□□ -1.94
ZC3H4Q9UPT8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
ZC3H4Q9UPT8 SNORD116-10-201ENST00000363791 102 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 RNU6-865P-201ENST00000364772 107 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 RNY1P4-201ENST00000384595 115 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 SNORA64-201ENST00000384674 134 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 SNORA26.9-201ENST00000391322 122 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 RNU6-1086P-201ENST00000410930 100 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 RNU6-826P-201ENST00000516827 104 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 CYP3A52P-201ENST00000563326 91 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 MIR4287-201ENST00000579398 78 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 RNU6-86P-201ENST00000606534 107 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 AC103810.7-201ENST00000607821 91 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 AC008133.2-201ENST00000624540 351 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 Y_RNA.354-201ENST00000365448 111 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 Y_RNA.448-201ENST00000384185 108 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 RNU6-675P-201ENST00000384236 104 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 AL023284.1-201ENST00000403956 276 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 UBL5P1-201ENST00000507979 193 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 MIR4668-201ENST00000582284 70 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 MIR4439-201ENST00000583746 80 ntBASIC2.93□□□□□ -1.94
ZC3H4Q9UPT8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
ZC3H4Q9UPT8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ZC3H4Q9UPT8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ZC3H4Q9UPT8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ZC3H4Q9UPT8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 271.6 ms