Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MIR504-201ENST00000385065 83 ntBASIC3.26□□□□□ -1.89
LHX6Q9UPM6 TRBV12-2-201ENST00000489763 344 ntBASIC3.26□□□□□ -1.89
LHX6Q9UPM6 RNA5SP481-201ENST00000516814 122 ntBASIC3.26□□□□□ -1.89
LHX6Q9UPM6 SUB1P4-201ENST00000566062 339 ntBASIC3.26□□□□□ -1.89
LHX6Q9UPM6 AL449363.1-201ENST00000617815 186 ntBASIC3.26□□□□□ -1.89
LHX6Q9UPM6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LHX6Q9UPM6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.26□□□□□ -1.89
LHX6Q9UPM6 AL161431.1-201ENST00000618966 4205 ntBASIC3.26□□□□□ -1.89
LHX6Q9UPM6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
LHX6Q9UPM6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.25□□□□□ -1.89
LHX6Q9UPM6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LHX6Q9UPM6 RNU11-3P-201ENST00000391111 133 ntBASIC3.25□□□□□ -1.89
LHX6Q9UPM6 SNORD63B-201ENST00000411005 70 ntBASIC3.25□□□□□ -1.89
LHX6Q9UPM6 RNU6-1194P-201ENST00000516208 104 ntBASIC3.25□□□□□ -1.89
LHX6Q9UPM6 AC069503.3-201ENST00000618674 145 ntBASIC3.25□□□□□ -1.89
LHX6Q9UPM6 U4.3-201ENST00000621047 82 ntBASIC3.25□□□□□ -1.89
LHX6Q9UPM6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.25□□□□□ -1.89
LHX6Q9UPM6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LHX6Q9UPM6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LHX6Q9UPM6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LHX6Q9UPM6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
LHX6Q9UPM6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LHX6Q9UPM6 Y_RNA.239-201ENST00000364444 113 ntBASIC3.24□□□□□ -1.89
LHX6Q9UPM6 SNORA67.4-201ENST00000384688 142 ntBASIC3.24□□□□□ -1.89
LHX6Q9UPM6 MIR184-201ENST00000384962 84 ntBASIC3.24□□□□□ -1.89
LHX6Q9UPM6 MIR597-201ENST00000384968 97 ntBASIC3.24□□□□□ -1.89
LHX6Q9UPM6 RNU4-47P-201ENST00000410876 114 ntBASIC3.24□□□□□ -1.89
LHX6Q9UPM6 AC009474.2-201ENST00000451383 136 ntBASIC3.24□□□□□ -1.89
LHX6Q9UPM6 IGKV2-26-201ENST00000518305 343 ntBASIC3.24□□□□□ -1.89
LHX6Q9UPM6 MIR4425-201ENST00000580572 84 ntBASIC3.24□□□□□ -1.89
LHX6Q9UPM6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.24□□□□□ -1.89
LHX6Q9UPM6 AC244205.2-202ENST00000635781 342 ntBASIC3.24□□□□□ -1.89
LHX6Q9UPM6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LHX6Q9UPM6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.23□□□□□ -1.89
LHX6Q9UPM6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LHX6Q9UPM6 RPS27P16-201ENST00000425758 201 ntBASIC3.23□□□□□ -1.89
LHX6Q9UPM6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LHX6Q9UPM6 AC104389.3-201ENST00000445629 235 ntBASIC3.23□□□□□ -1.89
LHX6Q9UPM6 AC022202.1-201ENST00000613515 211 ntBASIC3.23□□□□□ -1.89
LHX6Q9UPM6 MIR7111-201ENST00000619751 72 ntBASIC3.23□□□□□ -1.89
LHX6Q9UPM6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LHX6Q9UPM6 SNORD113.1-201ENST00000363280 73 ntBASIC3.22□□□□□ -1.89
LHX6Q9UPM6 RN7SKP220-201ENST00000410611 288 ntBASIC3.22□□□□□ -1.89
LHX6Q9UPM6 RPS29P31-201ENST00000446147 164 ntBASIC3.22□□□□□ -1.89
LHX6Q9UPM6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.22□□□□□ -1.89
LHX6Q9UPM6 MIR2113-201ENST00000459007 91 ntBASIC3.22□□□□□ -1.89
LHX6Q9UPM6 RNU7-41P-201ENST00000515917 61 ntBASIC3.22□□□□□ -1.89
LHX6Q9UPM6 GTF3AP2-201ENST00000557014 266 ntBASIC3.22□□□□□ -1.89
LHX6Q9UPM6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.22□□□□□ -1.89
LHX6Q9UPM6 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LHX6Q9UPM6 ZNF209P-201ENST00000593450 2304 ntBASIC3.22□□□□□ -1.89
LHX6Q9UPM6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.21□□□□□ -1.89
LHX6Q9UPM6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LHX6Q9UPM6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LHX6Q9UPM6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.21□□□□□ -1.9
LHX6Q9UPM6 RNVU1-2-201ENST00000516326 135 ntBASIC3.21□□□□□ -1.9
LHX6Q9UPM6 AP003355.3-201ENST00000623465 114 ntBASIC3.21□□□□□ -1.9
LHX6Q9UPM6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.21□□□□□ -1.9
LHX6Q9UPM6 AC092435.3-201ENST00000565538 3654 ntBASIC3.2□□□□□ -1.9
LHX6Q9UPM6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LHX6Q9UPM6 MIR30D-201ENST00000362283 70 ntBASIC3.2□□□□□ -1.9
LHX6Q9UPM6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LHX6Q9UPM6 HMGN2P35-201ENST00000412164 270 ntBASIC3.2□□□□□ -1.9
LHX6Q9UPM6 AC097510.1-201ENST00000510945 133 ntBASIC3.2□□□□□ -1.9
LHX6Q9UPM6 PRELID3BP2-201ENST00000605362 201 ntBASIC3.2□□□□□ -1.9
LHX6Q9UPM6 U6.81-201ENST00000612550 106 ntBASIC3.2□□□□□ -1.9
LHX6Q9UPM6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LHX6Q9UPM6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LHX6Q9UPM6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LHX6Q9UPM6 MAPK10-362ENST00000641864 4484 ntBASIC3.19□□□□□ -1.9
LHX6Q9UPM6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LHX6Q9UPM6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LHX6Q9UPM6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LHX6Q9UPM6 RNU6-112P-201ENST00000363599 104 ntBASIC3.19□□□□□ -1.9
LHX6Q9UPM6 MIR591-201ENST00000385290 95 ntBASIC3.19□□□□□ -1.9
LHX6Q9UPM6 RNU7-26P-201ENST00000458980 63 ntBASIC3.19□□□□□ -1.9
LHX6Q9UPM6 RNU2-19P-201ENST00000517288 84 ntBASIC3.19□□□□□ -1.9
LHX6Q9UPM6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.19□□□□□ -1.9
LHX6Q9UPM6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LHX6Q9UPM6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.18□□□□□ -1.9
LHX6Q9UPM6 RNU4-58P-201ENST00000363192 141 ntBASIC3.18□□□□□ -1.9
LHX6Q9UPM6 Y_RNA.236-201ENST00000364427 111 ntBASIC3.18□□□□□ -1.9
LHX6Q9UPM6 SNORA48.1-201ENST00000390879 135 ntBASIC3.18□□□□□ -1.9
LHX6Q9UPM6 SNORA40.6-201ENST00000391153 128 ntBASIC3.18□□□□□ -1.9
LHX6Q9UPM6 snoU13.26-201ENST00000459452 105 ntBASIC3.18□□□□□ -1.9
LHX6Q9UPM6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.18□□□□□ -1.9
LHX6Q9UPM6 MIR6740-201ENST00000618268 113 ntBASIC3.18□□□□□ -1.9
LHX6Q9UPM6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.18□□□□□ -1.9
LHX6Q9UPM6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.18□□□□□ -1.9
LHX6Q9UPM6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LHX6Q9UPM6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
LHX6Q9UPM6 RNA5SP48-201ENST00000363969 126 ntBASIC3.17□□□□□ -1.9
LHX6Q9UPM6 SNORA70B-201ENST00000384210 135 ntBASIC3.17□□□□□ -1.9
LHX6Q9UPM6 MIR1283-2-201ENST00000408621 87 ntBASIC3.17□□□□□ -1.9
LHX6Q9UPM6 AC006989.1-201ENST00000427212 131 ntBASIC3.17□□□□□ -1.9
LHX6Q9UPM6 RNU6-531P-201ENST00000516694 104 ntBASIC3.17□□□□□ -1.9
LHX6Q9UPM6 RNA5SP137-201ENST00000516833 135 ntBASIC3.17□□□□□ -1.9
LHX6Q9UPM6 RNU11-2P-201ENST00000516898 142 ntBASIC3.17□□□□□ -1.9
LHX6Q9UPM6 MIR3140-201ENST00000583685 90 ntBASIC3.17□□□□□ -1.9
LHX6Q9UPM6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 283.8 ms