Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 GHRLOS.1-201ENST00000610995 70 ntBASIC4.05□□□□□ -1.76
FOXD4L1Q9NU39 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
FOXD4L1Q9NU39 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD4L1Q9NU39 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD4L1Q9NU39 RNU4-82P-201ENST00000362443 140 ntBASIC4.04□□□□□ -1.76
FOXD4L1Q9NU39 RNU6-154P-201ENST00000384306 106 ntBASIC4.04□□□□□ -1.76
FOXD4L1Q9NU39 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXD4L1Q9NU39 RN7SL542P-201ENST00000467147 294 ntBASIC4.04□□□□□ -1.76
FOXD4L1Q9NU39 RNU6-947P-201ENST00000516264 106 ntBASIC4.04□□□□□ -1.76
FOXD4L1Q9NU39 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.04□□□□□ -1.76
FOXD4L1Q9NU39 RNU11-2P-201ENST00000516898 142 ntBASIC4.04□□□□□ -1.76
FOXD4L1Q9NU39 RNU7-156P-201ENST00000517214 74 ntBASIC4.04□□□□□ -1.76
FOXD4L1Q9NU39 SNORA31.25-201ENST00000517242 134 ntBASIC4.04□□□□□ -1.76
FOXD4L1Q9NU39 TRDV1-202ENST00000621643 102 ntBASIC4.04□□□□□ -1.76
FOXD4L1Q9NU39 AP003355.3-201ENST00000623465 114 ntBASIC4.04□□□□□ -1.76
FOXD4L1Q9NU39 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXD4L1Q9NU39 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXD4L1Q9NU39 AC025518.1-201ENST00000479856 347 ntBASIC4.03□□□□□ -1.76
FOXD4L1Q9NU39 SNORA64.4-201ENST00000516632 81 ntBASIC4.03□□□□□ -1.76
FOXD4L1Q9NU39 MIR4429-201ENST00000580105 73 ntBASIC4.03□□□□□ -1.76
FOXD4L1Q9NU39 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
FOXD4L1Q9NU39 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXD4L1Q9NU39 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
FOXD4L1Q9NU39 SNORD56.3-201ENST00000363507 71 ntBASIC4.02□□□□□ -1.77
FOXD4L1Q9NU39 RNU6-340P-201ENST00000364005 107 ntBASIC4.02□□□□□ -1.77
FOXD4L1Q9NU39 AL035423.1-201ENST00000420331 213 ntBASIC4.02□□□□□ -1.77
FOXD4L1Q9NU39 MIR18B-201ENST00000454574 71 ntBASIC4.02□□□□□ -1.77
FOXD4L1Q9NU39 TRAJ51-201ENST00000504127 63 ntBASIC4.02□□□□□ -1.77
FOXD4L1Q9NU39 Y_RNA.809-201ENST00000516058 95 ntBASIC4.02□□□□□ -1.77
FOXD4L1Q9NU39 MIR6516-201ENST00000630554 81 ntBASIC4.02□□□□□ -1.77
FOXD4L1Q9NU39 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXD4L1Q9NU39 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
FOXD4L1Q9NU39 RNU6-330P-201ENST00000363015 107 ntBASIC4.01□□□□□ -1.77
FOXD4L1Q9NU39 RNU1-36P-201ENST00000365130 165 ntBASIC4.01□□□□□ -1.77
FOXD4L1Q9NU39 RNU6-291P-201ENST00000384720 107 ntBASIC4.01□□□□□ -1.77
FOXD4L1Q9NU39 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC4.01□□□□□ -1.77
FOXD4L1Q9NU39 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXD4L1Q9NU39 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
FOXD4L1Q9NU39 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXD4L1Q9NU39 AC093908.1-201ENST00000623125 8092 ntBASIC4.01□□□□□ -1.77
FOXD4L1Q9NU39 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4□□□□□ -1.77
FOXD4L1Q9NU39 MIR519A1-201ENST00000385257 85 ntBASIC4□□□□□ -1.77
FOXD4L1Q9NU39 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC4□□□□□ -1.77
FOXD4L1Q9NU39 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
FOXD4L1Q9NU39 RNU6-895P-201ENST00000384125 103 ntBASIC3.99□□□□□ -1.77
FOXD4L1Q9NU39 AC091153.1-201ENST00000466297 402 ntBASIC3.99□□□□□ -1.77
FOXD4L1Q9NU39 AC034229.5-201ENST00000624258 185 ntBASIC3.99□□□□□ -1.77
FOXD4L1Q9NU39 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
FOXD4L1Q9NU39 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXD4L1Q9NU39 ZNF209P-201ENST00000593450 2304 ntBASIC3.98□□□□□ -1.77
FOXD4L1Q9NU39 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXD4L1Q9NU39 RNU1-143P-201ENST00000516296 146 ntBASIC3.98□□□□□ -1.77
FOXD4L1Q9NU39 SCARNA20.6-201ENST00000517251 106 ntBASIC3.98□□□□□ -1.77
FOXD4L1Q9NU39 MIR3186-201ENST00000577404 85 ntBASIC3.98□□□□□ -1.77
FOXD4L1Q9NU39 U1.23-201ENST00000610293 146 ntBASIC3.98□□□□□ -1.77
FOXD4L1Q9NU39 RNU1-68P-201ENST00000615382 146 ntBASIC3.98□□□□□ -1.77
FOXD4L1Q9NU39 U1.39-201ENST00000621562 146 ntBASIC3.98□□□□□ -1.77
FOXD4L1Q9NU39 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXD4L1Q9NU39 MIR103A2-201ENST00000362154 78 ntBASIC3.97□□□□□ -1.77
FOXD4L1Q9NU39 SNORD101-201ENST00000384027 73 ntBASIC3.97□□□□□ -1.77
FOXD4L1Q9NU39 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXD4L1Q9NU39 MIR148B-201ENST00000362252 99 ntBASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 RNU6-664P-201ENST00000362381 107 ntBASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 RNU6-1260P-201ENST00000362944 107 ntBASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 SNORA3A-201ENST00000364113 130 ntBASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 MIR200C-201ENST00000384980 68 ntBASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 RNU6ATAC-201ENST00000408749 126 ntBASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 AL133373.1-201ENST00000497098 94 ntBASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 MIR3675-201ENST00000583661 73 ntBASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 AC013244.2-201ENST00000603396 103 ntBASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 MIR7153-201ENST00000637758 57 ntBASIC3.96□□□□□ -1.78
FOXD4L1Q9NU39 MTND4LP19-201ENST00000403051 166 ntBASIC3.95□□□□□ -1.78
FOXD4L1Q9NU39 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.95□□□□□ -1.78
FOXD4L1Q9NU39 RNU7-193P-201ENST00000516723 65 ntBASIC3.95□□□□□ -1.78
FOXD4L1Q9NU39 RNU6-250P-201ENST00000516958 103 ntBASIC3.95□□□□□ -1.78
FOXD4L1Q9NU39 MIR3200-201ENST00000580767 85 ntBASIC3.95□□□□□ -1.78
FOXD4L1Q9NU39 MIR3158-1-201ENST00000583596 81 ntBASIC3.95□□□□□ -1.78
FOXD4L1Q9NU39 AC005520.4-201ENST00000604337 90 ntBASIC3.95□□□□□ -1.78
FOXD4L1Q9NU39 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXD4L1Q9NU39 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXD4L1Q9NU39 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXD4L1Q9NU39 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXD4L1Q9NU39 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.94□□□□□ -1.78
FOXD4L1Q9NU39 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXD4L1Q9NU39 AL596028.1-201ENST00000326971 197 ntBASIC3.94□□□□□ -1.78
FOXD4L1Q9NU39 U8.13-201ENST00000390842 128 ntBASIC3.94□□□□□ -1.78
FOXD4L1Q9NU39 AC115115.1-201ENST00000449927 248 ntBASIC3.94□□□□□ -1.78
FOXD4L1Q9NU39 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXD4L1Q9NU39 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXD4L1Q9NU39 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXD4L1Q9NU39 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXD4L1Q9NU39 Y_RNA.56-201ENST00000362798 112 ntBASIC3.93□□□□□ -1.78
FOXD4L1Q9NU39 RNU6-987P-201ENST00000384759 104 ntBASIC3.93□□□□□ -1.78
FOXD4L1Q9NU39 AL606490.4-201ENST00000423117 127 ntBASIC3.93□□□□□ -1.78
FOXD4L1Q9NU39 SNORA67.7-201ENST00000516664 135 ntBASIC3.93□□□□□ -1.78
FOXD4L1Q9NU39 MIR4696-201ENST00000581431 70 ntBASIC3.93□□□□□ -1.78
FOXD4L1Q9NU39 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms