Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RNA5SP48-201ENST00000363969 126 ntBASIC3.04□□□□□ -1.92
PHOX2BQ99453 Y_RNA.221-201ENST00000364248 96 ntBASIC3.04□□□□□ -1.92
PHOX2BQ99453 RN7SKP123-201ENST00000410732 291 ntBASIC3.04□□□□□ -1.92
PHOX2BQ99453 RNA5SP492-201ENST00000411330 114 ntBASIC3.04□□□□□ -1.92
PHOX2BQ99453 AC087499.2-201ENST00000432861 149 ntBASIC3.04□□□□□ -1.92
PHOX2BQ99453 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.04□□□□□ -1.92
PHOX2BQ99453 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
PHOX2BQ99453 SEPT14P17-201ENST00000617978 177 ntBASIC3.04□□□□□ -1.92
PHOX2BQ99453 MIR622-201ENST00000638396 96 ntBASIC3.04□□□□□ -1.92
PHOX2BQ99453 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PHOX2BQ99453 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
PHOX2BQ99453 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PHOX2BQ99453 SNORD15B-201ENST00000384714 146 ntBASIC3.03□□□□□ -1.92
PHOX2BQ99453 RNU1-98P-201ENST00000458992 160 ntBASIC3.03□□□□□ -1.92
PHOX2BQ99453 SNORA31.15-201ENST00000516771 132 ntBASIC3.03□□□□□ -1.92
PHOX2BQ99453 MIR548AO-201ENST00000579992 96 ntBASIC3.03□□□□□ -1.92
PHOX2BQ99453 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PHOX2BQ99453 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PHOX2BQ99453 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PHOX2BQ99453 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
PHOX2BQ99453 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
PHOX2BQ99453 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PHOX2BQ99453 AC093831.2-201ENST00000624393 3427 ntBASIC3.02□□□□□ -1.93
PHOX2BQ99453 SNORD115-37-201ENST00000363768 82 ntBASIC3.02□□□□□ -1.93
PHOX2BQ99453 AC004965.1-201ENST00000413033 213 ntBASIC3.02□□□□□ -1.93
PHOX2BQ99453 RN7SL75P-201ENST00000461926 281 ntBASIC3.02□□□□□ -1.93
PHOX2BQ99453 SNORA31.17-201ENST00000516953 127 ntBASIC3.02□□□□□ -1.93
PHOX2BQ99453 AC105081.1-201ENST00000617727 106 ntBASIC3.02□□□□□ -1.93
PHOX2BQ99453 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.02□□□□□ -1.93
PHOX2BQ99453 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.01□□□□□ -1.93
PHOX2BQ99453 Y_RNA.168-201ENST00000363740 102 ntBASIC3.01□□□□□ -1.93
PHOX2BQ99453 Y_RNA.191-201ENST00000363972 113 ntBASIC3.01□□□□□ -1.93
PHOX2BQ99453 RNU6-652P-201ENST00000365488 107 ntBASIC3.01□□□□□ -1.93
PHOX2BQ99453 Y_RNA.508-201ENST00000384502 114 ntBASIC3.01□□□□□ -1.93
PHOX2BQ99453 MIR512-1-201ENST00000384913 84 ntBASIC3.01□□□□□ -1.93
PHOX2BQ99453 MIR519C-201ENST00000385053 87 ntBASIC3.01□□□□□ -1.93
PHOX2BQ99453 RPS29P11-201ENST00000496507 171 ntBASIC3.01□□□□□ -1.93
PHOX2BQ99453 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.01□□□□□ -1.93
PHOX2BQ99453 AP000753.3-201ENST00000604083 169 ntBASIC3.01□□□□□ -1.93
PHOX2BQ99453 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
PHOX2BQ99453 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.01□□□□□ -1.93
PHOX2BQ99453 AC009487.2-201ENST00000420969 6821 ntBASIC3□□□□□ -1.93
PHOX2BQ99453 HSBP1P2-201ENST00000299671 229 ntBASIC3□□□□□ -1.93
PHOX2BQ99453 RNY1P13-201ENST00000365030 105 ntBASIC3□□□□□ -1.93
PHOX2BQ99453 RNA5SP229-201ENST00000410809 99 ntBASIC3□□□□□ -1.93
PHOX2BQ99453 RNA5SP450-201ENST00000411206 102 ntBASIC3□□□□□ -1.93
PHOX2BQ99453 RNU1-143P-201ENST00000516296 146 ntBASIC3□□□□□ -1.93
PHOX2BQ99453 SNORA31.26-201ENST00000517250 137 ntBASIC3□□□□□ -1.93
PHOX2BQ99453 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3□□□□□ -1.93
PHOX2BQ99453 U1.23-201ENST00000610293 146 ntBASIC3□□□□□ -1.93
PHOX2BQ99453 uc_338.1-201ENST00000612113 180 ntBASIC3□□□□□ -1.93
PHOX2BQ99453 RNU1-68P-201ENST00000615382 146 ntBASIC3□□□□□ -1.93
PHOX2BQ99453 U1.39-201ENST00000621562 146 ntBASIC3□□□□□ -1.93
PHOX2BQ99453 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3□□□□□ -1.93
PHOX2BQ99453 RNA5SP68-201ENST00000363885 119 ntBASIC2.99□□□□□ -1.93
PHOX2BQ99453 RNY1P2-201ENST00000364820 117 ntBASIC2.99□□□□□ -1.93
PHOX2BQ99453 RNU6-1237P-201ENST00000384777 107 ntBASIC2.99□□□□□ -1.93
PHOX2BQ99453 Z98742.3-201ENST00000418637 326 ntBASIC2.99□□□□□ -1.93
PHOX2BQ99453 AC245517.4-201ENST00000448601 281 ntBASIC2.99□□□□□ -1.93
PHOX2BQ99453 AC093729.1-201ENST00000513074 128 ntBASIC2.99□□□□□ -1.93
PHOX2BQ99453 RNA5SP217-201ENST00000515959 91 ntBASIC2.99□□□□□ -1.93
PHOX2BQ99453 SCARNA20.6-201ENST00000517251 106 ntBASIC2.99□□□□□ -1.93
PHOX2BQ99453 AC141846.1-201ENST00000568348 142 ntBASIC2.99□□□□□ -1.93
PHOX2BQ99453 AL513043.2-201ENST00000573941 143 ntBASIC2.99□□□□□ -1.93
PHOX2BQ99453 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.99□□□□□ -1.93
PHOX2BQ99453 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.99□□□□□ -1.93
PHOX2BQ99453 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PHOX2BQ99453 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.98□□□□□ -1.93
PHOX2BQ99453 RNA5SP344-201ENST00000411081 104 ntBASIC2.98□□□□□ -1.93
PHOX2BQ99453 RNA5SP148-201ENST00000516527 94 ntBASIC2.98□□□□□ -1.93
PHOX2BQ99453 AL357312.1-201ENST00000603879 298 ntBASIC2.98□□□□□ -1.93
PHOX2BQ99453 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.98□□□□□ -1.93
PHOX2BQ99453 MIR6817-201ENST00000615588 66 ntBASIC2.98□□□□□ -1.93
PHOX2BQ99453 AL662814.1-201ENST00000617364 121 ntBASIC2.98□□□□□ -1.93
PHOX2BQ99453 AL353997.5-201ENST00000618886 171 ntBASIC2.98□□□□□ -1.93
PHOX2BQ99453 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.97□□□□□ -1.93
PHOX2BQ99453 Y_RNA.355-201ENST00000365462 98 ntBASIC2.97□□□□□ -1.93
PHOX2BQ99453 RNU6-949P-201ENST00000384040 107 ntBASIC2.97□□□□□ -1.93
PHOX2BQ99453 MIR194-1-201ENST00000384892 85 ntBASIC2.97□□□□□ -1.93
PHOX2BQ99453 SNORA31.25-201ENST00000517242 134 ntBASIC2.97□□□□□ -1.93
PHOX2BQ99453 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PHOX2BQ99453 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PHOX2BQ99453 MIR181B2-201ENST00000385004 89 ntBASIC2.96□□□□□ -1.94
PHOX2BQ99453 AC073261.1-201ENST00000429409 121 ntBASIC2.96□□□□□ -1.94
PHOX2BQ99453 UQCRHP3-201ENST00000451503 251 ntBASIC2.96□□□□□ -1.94
PHOX2BQ99453 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PHOX2BQ99453 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PHOX2BQ99453 AC093010.3-201ENST00000570269 15214 ntBASIC2.95□□□□□ -1.94
PHOX2BQ99453 Y_RNA.316-201ENST00000365118 111 ntBASIC2.95□□□□□ -1.94
PHOX2BQ99453 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.95□□□□□ -1.94
PHOX2BQ99453 RNU6-519P-201ENST00000410590 108 ntBASIC2.95□□□□□ -1.94
PHOX2BQ99453 AC027119.1-201ENST00000440877 241 ntBASIC2.95□□□□□ -1.94
PHOX2BQ99453 MIR8066-201ENST00000617280 78 ntBASIC2.95□□□□□ -1.94
PHOX2BQ99453 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.95□□□□□ -1.94
PHOX2BQ99453 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PHOX2BQ99453 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PHOX2BQ99453 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
PHOX2BQ99453 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PHOX2BQ99453 RNU6-203P-201ENST00000384038 104 ntBASIC2.94□□□□□ -1.94
PHOX2BQ99453 SNORA2B-201ENST00000384583 137 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms