Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RNU1-143P-201ENST00000516296 146 ntBASIC3.27□□□□□ -1.89
PTCD2Q8WV60 RNA5SP137-201ENST00000516833 135 ntBASIC3.27□□□□□ -1.89
PTCD2Q8WV60 SNORA4-201ENST00000584302 138 ntBASIC3.27□□□□□ -1.89
PTCD2Q8WV60 U1.23-201ENST00000610293 146 ntBASIC3.27□□□□□ -1.89
PTCD2Q8WV60 RNU1-68P-201ENST00000615382 146 ntBASIC3.27□□□□□ -1.89
PTCD2Q8WV60 U1.39-201ENST00000621562 146 ntBASIC3.27□□□□□ -1.89
PTCD2Q8WV60 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PTCD2Q8WV60 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTCD2Q8WV60 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTCD2Q8WV60 RN7SKP123-201ENST00000410732 291 ntBASIC3.26□□□□□ -1.89
PTCD2Q8WV60 AC244023.1-201ENST00000426884 112 ntBASIC3.26□□□□□ -1.89
PTCD2Q8WV60 AC105272.1-201ENST00000438604 198 ntBASIC3.26□□□□□ -1.89
PTCD2Q8WV60 SNORA59A-201ENST00000459326 152 ntBASIC3.26□□□□□ -1.89
PTCD2Q8WV60 MIR5680-201ENST00000577577 84 ntBASIC3.26□□□□□ -1.89
PTCD2Q8WV60 MIR4506-201ENST00000584693 77 ntBASIC3.26□□□□□ -1.89
PTCD2Q8WV60 AC242498.1-201ENST00000604134 111 ntBASIC3.26□□□□□ -1.89
PTCD2Q8WV60 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTCD2Q8WV60 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTCD2Q8WV60 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
PTCD2Q8WV60 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PTCD2Q8WV60 RNA5SP374-201ENST00000362939 125 ntBASIC3.25□□□□□ -1.89
PTCD2Q8WV60 RNU1-138P-201ENST00000384093 164 ntBASIC3.25□□□□□ -1.89
PTCD2Q8WV60 RNU1-148P-201ENST00000384472 162 ntBASIC3.25□□□□□ -1.89
PTCD2Q8WV60 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PTCD2Q8WV60 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.25□□□□□ -1.89
PTCD2Q8WV60 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.25□□□□□ -1.89
PTCD2Q8WV60 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PTCD2Q8WV60 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PTCD2Q8WV60 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PTCD2Q8WV60 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PTCD2Q8WV60 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
PTCD2Q8WV60 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PTCD2Q8WV60 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PTCD2Q8WV60 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PTCD2Q8WV60 RNU7-26P-201ENST00000458980 63 ntBASIC3.24□□□□□ -1.89
PTCD2Q8WV60 AC121758.2-201ENST00000553271 193 ntBASIC3.24□□□□□ -1.89
PTCD2Q8WV60 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PTCD2Q8WV60 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCD2Q8WV60 SNORD115-31-201ENST00000365318 82 ntBASIC3.23□□□□□ -1.89
PTCD2Q8WV60 MIR518A2-201ENST00000384966 87 ntBASIC3.23□□□□□ -1.89
PTCD2Q8WV60 MIR518E-201ENST00000385252 88 ntBASIC3.23□□□□□ -1.89
PTCD2Q8WV60 RNU7-156P-201ENST00000517214 74 ntBASIC3.23□□□□□ -1.89
PTCD2Q8WV60 MIR2682-201ENST00000580305 110 ntBASIC3.23□□□□□ -1.89
PTCD2Q8WV60 UBL5P2-201ENST00000583788 219 ntBASIC3.23□□□□□ -1.89
PTCD2Q8WV60 MIR8057-201ENST00000620957 69 ntBASIC3.23□□□□□ -1.89
PTCD2Q8WV60 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCD2Q8WV60 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PTCD2Q8WV60 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTCD2Q8WV60 AL035425.3-201ENST00000564206 4996 ntBASIC3.22□□□□□ -1.89
PTCD2Q8WV60 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTCD2Q8WV60 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTCD2Q8WV60 SNORA48.2-201ENST00000390926 124 ntBASIC3.22□□□□□ -1.89
PTCD2Q8WV60 RNA5SP501-201ENST00000410990 112 ntBASIC3.22□□□□□ -1.89
PTCD2Q8WV60 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.22□□□□□ -1.89
PTCD2Q8WV60 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTCD2Q8WV60 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.22□□□□□ -1.89
PTCD2Q8WV60 Y_RNA.36-201ENST00000362602 112 ntBASIC3.21□□□□□ -1.9
PTCD2Q8WV60 RNA5SP48-201ENST00000363969 126 ntBASIC3.21□□□□□ -1.9
PTCD2Q8WV60 SNORA38.1-201ENST00000364172 131 ntBASIC3.21□□□□□ -1.9
PTCD2Q8WV60 SNORA67.4-201ENST00000384688 142 ntBASIC3.21□□□□□ -1.9
PTCD2Q8WV60 AC092427.1-202ENST00000430569 476 ntBASIC3.21□□□□□ -1.9
PTCD2Q8WV60 AC245166.1-201ENST00000521012 253 ntBASIC3.21□□□□□ -1.9
PTCD2Q8WV60 PRELID3BP2-201ENST00000605362 201 ntBASIC3.21□□□□□ -1.9
PTCD2Q8WV60 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.21□□□□□ -1.9
PTCD2Q8WV60 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PTCD2Q8WV60 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
PTCD2Q8WV60 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCD2Q8WV60 RNU6-1123P-201ENST00000362347 106 ntBASIC3.2□□□□□ -1.9
PTCD2Q8WV60 RNU6-957P-201ENST00000363652 99 ntBASIC3.2□□□□□ -1.9
PTCD2Q8WV60 MIR128-1-201ENST00000384921 82 ntBASIC3.2□□□□□ -1.9
PTCD2Q8WV60 SNORD90-201ENST00000391145 111 ntBASIC3.2□□□□□ -1.9
PTCD2Q8WV60 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.2□□□□□ -1.9
PTCD2Q8WV60 DEFB122-202ENST00000569013 197 ntBASIC3.2□□□□□ -1.9
PTCD2Q8WV60 AC006023.1-201ENST00000603944 259 ntBASIC3.2□□□□□ -1.9
PTCD2Q8WV60 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCD2Q8WV60 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCD2Q8WV60 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTCD2Q8WV60 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTCD2Q8WV60 RNU7-106P-201ENST00000459514 67 ntBASIC3.19□□□□□ -1.9
PTCD2Q8WV60 SNORA31.15-201ENST00000516771 132 ntBASIC3.19□□□□□ -1.9
PTCD2Q8WV60 MIR5004-201ENST00000579078 107 ntBASIC3.19□□□□□ -1.9
PTCD2Q8WV60 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.19□□□□□ -1.9
PTCD2Q8WV60 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.19□□□□□ -1.9
PTCD2Q8WV60 Y_RNA.371-201ENST00000365591 113 ntBASIC3.18□□□□□ -1.9
PTCD2Q8WV60 RNU6-895P-201ENST00000384125 103 ntBASIC3.18□□□□□ -1.9
PTCD2Q8WV60 MIR563-201ENST00000385080 79 ntBASIC3.18□□□□□ -1.9
PTCD2Q8WV60 MIR942-201ENST00000401111 86 ntBASIC3.18□□□□□ -1.9
PTCD2Q8WV60 RN7SKP220-201ENST00000410611 288 ntBASIC3.18□□□□□ -1.9
PTCD2Q8WV60 snoU13.17-201ENST00000458802 104 ntBASIC3.18□□□□□ -1.9
PTCD2Q8WV60 AC005520.4-201ENST00000604337 90 ntBASIC3.18□□□□□ -1.9
PTCD2Q8WV60 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.18□□□□□ -1.9
PTCD2Q8WV60 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCD2Q8WV60 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTCD2Q8WV60 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PTCD2Q8WV60 RNY4P3-201ENST00000365254 95 ntBASIC3.17□□□□□ -1.9
PTCD2Q8WV60 RNU1-51P-201ENST00000365345 176 ntBASIC3.17□□□□□ -1.9
PTCD2Q8WV60 RNU6-53P-201ENST00000365367 106 ntBASIC3.17□□□□□ -1.9
PTCD2Q8WV60 RNU6-396P-201ENST00000365369 105 ntBASIC3.17□□□□□ -1.9
PTCD2Q8WV60 SNORA46-201ENST00000384762 135 ntBASIC3.17□□□□□ -1.9
PTCD2Q8WV60 RNU4-47P-201ENST00000410876 114 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 267.6 ms