Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC116Q8IYX3 Y_RNA.57-201ENST00000362806 113 ntBASIC2.76□□□□□ -1.97
CCDC116Q8IYX3 SNORA38-201ENST00000363946 132 ntBASIC2.76□□□□□ -1.97
CCDC116Q8IYX3 RNU1-138P-201ENST00000384093 164 ntBASIC2.76□□□□□ -1.97
CCDC116Q8IYX3 AL450471.1-201ENST00000447509 127 ntBASIC2.76□□□□□ -1.97
CCDC116Q8IYX3 AC006023.1-201ENST00000603944 259 ntBASIC2.76□□□□□ -1.97
CCDC116Q8IYX3 AP000753.3-201ENST00000604083 169 ntBASIC2.76□□□□□ -1.97
CCDC116Q8IYX3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.76□□□□□ -1.97
CCDC116Q8IYX3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 RNU6-1094P-201ENST00000362416 104 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 RNY1P2-201ENST00000364820 117 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 HMGN2P39-201ENST00000398005 273 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 RN7SL429P-201ENST00000479090 223 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 AC004223.1-201ENST00000479840 271 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 AP004217.1-201ENST00000480579 346 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 RN7SL489P-201ENST00000486185 223 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 RN7SL327P-201ENST00000488659 223 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 RNA5SP341-201ENST00000516261 117 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 AC090897.1-201ENST00000580909 226 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 RN7SL853P-201ENST00000617250 223 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 AL662814.1-201ENST00000617364 121 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC116Q8IYX3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCDC116Q8IYX3 AC108206.1-201ENST00000570186 4159 ntBASIC2.74□□□□□ -1.97
CCDC116Q8IYX3 SNORA67.1-201ENST00000364749 141 ntBASIC2.74□□□□□ -1.97
CCDC116Q8IYX3 RNU4-83P-201ENST00000410863 133 ntBASIC2.74□□□□□ -1.97
CCDC116Q8IYX3 Z98742.3-201ENST00000418637 326 ntBASIC2.74□□□□□ -1.97
CCDC116Q8IYX3 MIR3935-201ENST00000583472 104 ntBASIC2.74□□□□□ -1.97
CCDC116Q8IYX3 AC104984.5-201ENST00000586878 94 ntBASIC2.74□□□□□ -1.97
CCDC116Q8IYX3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCDC116Q8IYX3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
CCDC116Q8IYX3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC116Q8IYX3 RNU6-624P-201ENST00000363411 107 ntBASIC2.73□□□□□ -1.97
CCDC116Q8IYX3 SNORA31.15-201ENST00000516771 132 ntBASIC2.73□□□□□ -1.97
CCDC116Q8IYX3 AL049779.4-201ENST00000604500 156 ntBASIC2.73□□□□□ -1.97
CCDC116Q8IYX3 AC010297.1-201ENST00000623948 149 ntBASIC2.73□□□□□ -1.97
CCDC116Q8IYX3 SNORA9.2-201ENST00000365361 133 ntBASIC2.72□□□□□ -1.97
CCDC116Q8IYX3 RNU6-949P-201ENST00000384040 107 ntBASIC2.72□□□□□ -1.97
CCDC116Q8IYX3 RNU7-85P-201ENST00000458851 63 ntBASIC2.72□□□□□ -1.97
CCDC116Q8IYX3 AC114801.3-201ENST00000510231 177 ntBASIC2.72□□□□□ -1.97
CCDC116Q8IYX3 RNU7-41P-201ENST00000515917 61 ntBASIC2.72□□□□□ -1.97
CCDC116Q8IYX3 AC107016.2-201ENST00000547968 190 ntBASIC2.72□□□□□ -1.97
CCDC116Q8IYX3 AL512598.1-201ENST00000610158 273 ntBASIC2.72□□□□□ -1.97
CCDC116Q8IYX3 Y_RNA.788-201ENST00000622394 112 ntBASIC2.72□□□□□ -1.97
CCDC116Q8IYX3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC116Q8IYX3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC116Q8IYX3 SNRPGP12-201ENST00000449481 213 ntBASIC2.71□□□□□ -1.98
CCDC116Q8IYX3 snoU13.11-201ENST00000459219 104 ntBASIC2.71□□□□□ -1.98
CCDC116Q8IYX3 RPS27P21-201ENST00000486977 252 ntBASIC2.71□□□□□ -1.98
CCDC116Q8IYX3 RNA5SP445-201ENST00000515889 115 ntBASIC2.71□□□□□ -1.98
CCDC116Q8IYX3 MIR4325-201ENST00000583049 90 ntBASIC2.71□□□□□ -1.98
CCDC116Q8IYX3 MIR4658-201ENST00000584344 65 ntBASIC2.71□□□□□ -1.98
CCDC116Q8IYX3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC116Q8IYX3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC116Q8IYX3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC116Q8IYX3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC116Q8IYX3 RNU6-1123P-201ENST00000362347 106 ntBASIC2.7□□□□□ -1.98
CCDC116Q8IYX3 RNU6-301P-201ENST00000384277 107 ntBASIC2.7□□□□□ -1.98
CCDC116Q8IYX3 RNU6-851P-201ENST00000384565 107 ntBASIC2.7□□□□□ -1.98
CCDC116Q8IYX3 RNU6-523P-201ENST00000516304 54 ntBASIC2.7□□□□□ -1.98
CCDC116Q8IYX3 MIR4500-201ENST00000579472 76 ntBASIC2.7□□□□□ -1.98
CCDC116Q8IYX3 MIR6733-201ENST00000635723 61 ntBASIC2.7□□□□□ -1.98
CCDC116Q8IYX3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 Y_RNA.508-201ENST00000384502 114 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 MIR512-1-201ENST00000384913 84 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 MIR524-201ENST00000385242 87 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 RNA5SP100-201ENST00000410903 110 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 RNA5SP59-201ENST00000410922 110 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 COTL1P1-201ENST00000422309 375 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 AC009474.2-201ENST00000451383 136 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 RNU6-850P-201ENST00000516934 103 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 AC138749.4-201ENST00000563970 127 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.69□□□□□ -1.98
CCDC116Q8IYX3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC116Q8IYX3 RNU1-51P-201ENST00000365345 176 ntBASIC2.68□□□□□ -1.98
CCDC116Q8IYX3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.68□□□□□ -1.98
CCDC116Q8IYX3 RPS29P6-201ENST00000438196 145 ntBASIC2.68□□□□□ -1.98
CCDC116Q8IYX3 Y_RNA.648-201ENST00000459455 110 ntBASIC2.68□□□□□ -1.98
CCDC116Q8IYX3 RNU6-557P-201ENST00000516842 110 ntBASIC2.68□□□□□ -1.98
CCDC116Q8IYX3 EIF4BP1-201ENST00000554881 351 ntBASIC2.68□□□□□ -1.98
CCDC116Q8IYX3 U1.36-201ENST00000620684 176 ntBASIC2.68□□□□□ -1.98
CCDC116Q8IYX3 WWP1P1-201ENST00000466609 2769 ntBASIC2.68□□□□□ -1.98
CCDC116Q8IYX3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.67□□□□□ -1.98
CCDC116Q8IYX3 S100A11P2-201ENST00000467589 312 ntBASIC2.67□□□□□ -1.98
CCDC116Q8IYX3 RNU6-322P-201ENST00000516010 103 ntBASIC2.67□□□□□ -1.98
CCDC116Q8IYX3 SNORA31.17-201ENST00000516953 127 ntBASIC2.67□□□□□ -1.98
CCDC116Q8IYX3 DEFB122-202ENST00000569013 197 ntBASIC2.67□□□□□ -1.98
CCDC116Q8IYX3 MIR4796-201ENST00000580742 81 ntBASIC2.67□□□□□ -1.98
CCDC116Q8IYX3 MIR6715A-201ENST00000615929 79 ntBASIC2.67□□□□□ -1.98
CCDC116Q8IYX3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CCDC116Q8IYX3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC116Q8IYX3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC116Q8IYX3 MIRLET7A1-201ENST00000362295 80 ntBASIC2.66□□□□□ -1.98
CCDC116Q8IYX3 RNU6-203P-201ENST00000384038 104 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 256.4 ms