Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXA2O43364 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXA2O43364 SNORD38B-201ENST00000384690 67 ntBASIC3.01□□□□□ -1.93
HOXA2O43364 MIR512-1-201ENST00000384913 84 ntBASIC3.01□□□□□ -1.93
HOXA2O43364 SNORD38B-202ENST00000625943 69 ntBASIC3.01□□□□□ -1.93
HOXA2O43364 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HOXA2O43364 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXA2O43364 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HOXA2O43364 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXA2O43364 RNU6-1123P-201ENST00000362347 106 ntBASIC3□□□□□ -1.93
HOXA2O43364 RNA5SP393-201ENST00000363423 117 ntBASIC3□□□□□ -1.93
HOXA2O43364 SNORA67.1-201ENST00000364749 141 ntBASIC3□□□□□ -1.93
HOXA2O43364 MIR519C-201ENST00000385053 87 ntBASIC3□□□□□ -1.93
HOXA2O43364 RNA5SP237-201ENST00000410414 113 ntBASIC3□□□□□ -1.93
HOXA2O43364 RNA5SP270-201ENST00000411361 118 ntBASIC3□□□□□ -1.93
HOXA2O43364 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3□□□□□ -1.93
HOXA2O43364 RNU6-917P-201ENST00000516294 104 ntBASIC3□□□□□ -1.93
HOXA2O43364 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3□□□□□ -1.93
HOXA2O43364 AL513043.2-201ENST00000573941 143 ntBASIC3□□□□□ -1.93
HOXA2O43364 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3□□□□□ -1.93
HOXA2O43364 MIR4251-201ENST00000635819 61 ntBASIC3□□□□□ -1.93
HOXA2O43364 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXA2O43364 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
HOXA2O43364 MIR26A1-201ENST00000362205 77 ntBASIC2.99□□□□□ -1.93
HOXA2O43364 RNU6-805P-201ENST00000365643 106 ntBASIC2.99□□□□□ -1.93
HOXA2O43364 RNU6-1237P-201ENST00000384777 107 ntBASIC2.99□□□□□ -1.93
HOXA2O43364 MIR548AO-201ENST00000579992 96 ntBASIC2.99□□□□□ -1.93
HOXA2O43364 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HOXA2O43364 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXA2O43364 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.98□□□□□ -1.93
HOXA2O43364 SNORD115-37-201ENST00000363768 82 ntBASIC2.98□□□□□ -1.93
HOXA2O43364 SNORD115-27-201ENST00000364430 82 ntBASIC2.98□□□□□ -1.93
HOXA2O43364 RNU6-322P-201ENST00000516010 103 ntBASIC2.98□□□□□ -1.93
HOXA2O43364 AC133485.1-201ENST00000567176 124 ntBASIC2.98□□□□□ -1.93
HOXA2O43364 MIR4446-201ENST00000578505 67 ntBASIC2.98□□□□□ -1.93
HOXA2O43364 MIR3935-201ENST00000583472 104 ntBASIC2.98□□□□□ -1.93
HOXA2O43364 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.98□□□□□ -1.93
HOXA2O43364 AC245884.12-201ENST00000615364 59 ntBASIC2.98□□□□□ -1.93
HOXA2O43364 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA2O43364 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXA2O43364 Y_RNA.168-201ENST00000363740 102 ntBASIC2.97□□□□□ -1.93
HOXA2O43364 RNU1-112P-201ENST00000364401 164 ntBASIC2.97□□□□□ -1.93
HOXA2O43364 RNY1P13-201ENST00000365030 105 ntBASIC2.97□□□□□ -1.93
HOXA2O43364 MIR181B2-201ENST00000385004 89 ntBASIC2.97□□□□□ -1.93
HOXA2O43364 AC093729.1-201ENST00000513074 128 ntBASIC2.97□□□□□ -1.93
HOXA2O43364 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA2O43364 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA2O43364 RNU6-360P-201ENST00000390944 104 ntBASIC2.96□□□□□ -1.94
HOXA2O43364 RNU6-613P-201ENST00000410412 108 ntBASIC2.96□□□□□ -1.94
HOXA2O43364 RNA5SP100-201ENST00000410903 110 ntBASIC2.96□□□□□ -1.94
HOXA2O43364 RNA5SP59-201ENST00000410922 110 ntBASIC2.96□□□□□ -1.94
HOXA2O43364 RNA5SP344-201ENST00000411081 104 ntBASIC2.96□□□□□ -1.94
HOXA2O43364 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXA2O43364 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXA2O43364 RN7SL499P-201ENST00000481141 276 ntBASIC2.96□□□□□ -1.94
HOXA2O43364 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.96□□□□□ -1.94
HOXA2O43364 MIR3945-201ENST00000581853 98 ntBASIC2.96□□□□□ -1.94
HOXA2O43364 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.96□□□□□ -1.94
HOXA2O43364 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.96□□□□□ -1.94
HOXA2O43364 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA2O43364 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA2O43364 RNU6-524P-201ENST00000384270 107 ntBASIC2.95□□□□□ -1.94
HOXA2O43364 RNA5SP508-201ENST00000411327 119 ntBASIC2.95□□□□□ -1.94
HOXA2O43364 AL513328.1-201ENST00000446460 224 ntBASIC2.95□□□□□ -1.94
HOXA2O43364 AC245166.1-201ENST00000521012 253 ntBASIC2.95□□□□□ -1.94
HOXA2O43364 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXA2O43364 FO624990.1-201ENST00000636373 85 ntBASIC2.95□□□□□ -1.94
HOXA2O43364 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.95□□□□□ -1.94
HOXA2O43364 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXA2O43364 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXA2O43364 SNORA3A-201ENST00000364113 130 ntBASIC2.94□□□□□ -1.94
HOXA2O43364 SNORA2B-201ENST00000384583 137 ntBASIC2.94□□□□□ -1.94
HOXA2O43364 RNU6-519P-201ENST00000410590 108 ntBASIC2.94□□□□□ -1.94
HOXA2O43364 AC027119.1-201ENST00000440877 241 ntBASIC2.94□□□□□ -1.94
HOXA2O43364 SNORA31.17-201ENST00000516953 127 ntBASIC2.94□□□□□ -1.94
HOXA2O43364 AC141846.1-201ENST00000568348 142 ntBASIC2.94□□□□□ -1.94
HOXA2O43364 DEFB122-202ENST00000569013 197 ntBASIC2.94□□□□□ -1.94
HOXA2O43364 MIR6817-201ENST00000615588 66 ntBASIC2.94□□□□□ -1.94
HOXA2O43364 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXA2O43364 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
HOXA2O43364 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXA2O43364 HSBP1P2-201ENST00000299671 229 ntBASIC2.93□□□□□ -1.94
HOXA2O43364 Y_RNA.94-201ENST00000363068 106 ntBASIC2.93□□□□□ -1.94
HOXA2O43364 RNA5SP68-201ENST00000363885 119 ntBASIC2.93□□□□□ -1.94
HOXA2O43364 RPS29P11-201ENST00000496507 171 ntBASIC2.93□□□□□ -1.94
HOXA2O43364 MIR4712-201ENST00000583750 82 ntBASIC2.93□□□□□ -1.94
HOXA2O43364 AC131280.1-202ENST00000624067 4211 ntBASIC2.92□□□□□ -1.94
HOXA2O43364 AC019129.1-201ENST00000403786 261 ntBASIC2.92□□□□□ -1.94
HOXA2O43364 AC003982.1-202ENST00000469928 248 ntBASIC2.92□□□□□ -1.94
HOXA2O43364 MIR3605-201ENST00000583214 100 ntBASIC2.92□□□□□ -1.94
HOXA2O43364 AP000753.3-201ENST00000604083 169 ntBASIC2.92□□□□□ -1.94
HOXA2O43364 AL662814.1-201ENST00000617364 121 ntBASIC2.92□□□□□ -1.94
HOXA2O43364 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
HOXA2O43364 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXA2O43364 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA2O43364 RNA5SP48-201ENST00000363969 126 ntBASIC2.91□□□□□ -1.94
HOXA2O43364 RNA5SP293-201ENST00000410527 113 ntBASIC2.91□□□□□ -1.94
HOXA2O43364 AC020891.4-201ENST00000605745 93 ntBASIC2.91□□□□□ -1.94
HOXA2O43364 RNU7-41P-201ENST00000515917 61 ntBASIC2.9□□□□□ -1.95
HOXA2O43364 RNA5SP282-201ENST00000516355 108 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms