Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 AL356320.1-201ENST00000429616 163 ntBASIC2.12□□□□□ -2.07
SH3D21A4FU49 AC109327.2-201ENST00000448339 378 ntBASIC2.12□□□□□ -2.07
SH3D21A4FU49 Y_RNA.685-201ENST00000516532 108 ntBASIC2.12□□□□□ -2.07
SH3D21A4FU49 RNA5SP437-201ENST00000517249 129 ntBASIC2.12□□□□□ -2.07
SH3D21A4FU49 DNAJC19P9-201ENST00000555084 351 ntBASIC2.12□□□□□ -2.07
SH3D21A4FU49 MIR4709-201ENST00000577272 72 ntBASIC2.12□□□□□ -2.07
SH3D21A4FU49 MIR4529-201ENST00000578110 78 ntBASIC2.12□□□□□ -2.07
SH3D21A4FU49 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.12□□□□□ -2.07
SH3D21A4FU49 AC021506.2-201ENST00000612354 169 ntBASIC2.12□□□□□ -2.07
SH3D21A4FU49 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SH3D21A4FU49 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
SH3D21A4FU49 Y_RNA.95-201ENST00000363079 95 ntBASIC2.11□□□□□ -2.07
SH3D21A4FU49 RNU6-1201P-201ENST00000384227 107 ntBASIC2.11□□□□□ -2.07
SH3D21A4FU49 Y_RNA.467-201ENST00000384297 102 ntBASIC2.11□□□□□ -2.07
SH3D21A4FU49 MIR526A1-201ENST00000384897 85 ntBASIC2.11□□□□□ -2.07
SH3D21A4FU49 RNU2-40P-201ENST00000410833 196 ntBASIC2.11□□□□□ -2.07
SH3D21A4FU49 AC026436.1-201ENST00000510537 270 ntBASIC2.11□□□□□ -2.07
SH3D21A4FU49 AL020996.3-201ENST00000606617 222 ntBASIC2.11□□□□□ -2.07
SH3D21A4FU49 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.11□□□□□ -2.07
SH3D21A4FU49 Y_RNA.73-201ENST00000362910 113 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 Y_RNA.190-201ENST00000363964 101 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 RNU6-497P-201ENST00000365316 104 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 Y_RNA.377-201ENST00000365644 108 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 SNORA24-201ENST00000384096 131 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 MIR518A2-201ENST00000384966 87 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 RNA5SP465-201ENST00000391195 109 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 RN7SKP223-201ENST00000410582 62 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
SH3D21A4FU49 HMGN1P33-201ENST00000432945 451 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 RNU6-1018P-201ENST00000516577 106 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 MIR4648-201ENST00000580107 72 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 MIR4448-201ENST00000584360 86 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.1□□□□□ -2.07
SH3D21A4FU49 AC046143.2-201ENST00000609789 160 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 MIR7843-201ENST00000622274 79 ntBASIC2.1□□□□□ -2.07
SH3D21A4FU49 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SH3D21A4FU49 Y_RNA.96-201ENST00000363092 109 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 RNU6-1124P-201ENST00000384169 107 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 MIR504-201ENST00000385065 83 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 MIR660-201ENST00000385235 97 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 SNORA48.1-201ENST00000390879 135 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 AL451046.2-201ENST00000403074 277 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 RNU7-73P-201ENST00000458743 63 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 Y_RNA.705-201ENST00000516862 110 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 FAM106DP-201ENST00000586416 501 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 AC096720.1-201ENST00000604441 183 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 AL513423.1-201ENST00000621695 132 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 MIR6766-201ENST00000622641 72 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 SNORD3E-202ENST00000627253 216 ntBASIC2.09□□□□□ -2.07
SH3D21A4FU49 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.09□□□□□ -2.07
SH3D21A4FU49 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SH3D21A4FU49 RNA5SP432-201ENST00000362480 116 ntBASIC2.08□□□□□ -2.08
SH3D21A4FU49 SNORA1.1-201ENST00000364671 133 ntBASIC2.08□□□□□ -2.08
SH3D21A4FU49 Y_RNA.430-201ENST00000384081 110 ntBASIC2.08□□□□□ -2.08
SH3D21A4FU49 RNU6-887P-201ENST00000410660 100 ntBASIC2.08□□□□□ -2.08
SH3D21A4FU49 RNA5SP450-201ENST00000411206 102 ntBASIC2.08□□□□□ -2.08
SH3D21A4FU49 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SH3D21A4FU49 RPL39P39-201ENST00000455840 151 ntBASIC2.08□□□□□ -2.08
SH3D21A4FU49 snoU13.27-201ENST00000459278 104 ntBASIC2.08□□□□□ -2.08
SH3D21A4FU49 snoU13.15-201ENST00000459407 104 ntBASIC2.08□□□□□ -2.08
SH3D21A4FU49 MIR1273D-201ENST00000577266 86 ntBASIC2.08□□□□□ -2.08
SH3D21A4FU49 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
SH3D21A4FU49 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SH3D21A4FU49 RNA5SP276-201ENST00000362580 94 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 RNU6-1313P-201ENST00000362622 102 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 RNU6-228P-201ENST00000362700 106 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 RNU6-112P-201ENST00000363599 104 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 RNU6-242P-201ENST00000384359 107 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 RNU6-296P-201ENST00000384608 107 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 RNU6-1067P-201ENST00000384752 107 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 RNU6-402P-201ENST00000410678 103 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 RNA5SP225-201ENST00000410874 135 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 RNA5SP501-201ENST00000410990 112 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 AC108729.3-201ENST00000513484 108 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 SUB1P4-201ENST00000566062 339 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 MIR5007-201ENST00000583098 95 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 MIR6873-201ENST00000622788 63 ntBASIC2.07□□□□□ -2.08
SH3D21A4FU49 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SH3D21A4FU49 SNORD115-35-201ENST00000365122 82 ntBASIC2.06□□□□□ -2.08
SH3D21A4FU49 SNORD116-22-201ENST00000384430 92 ntBASIC2.06□□□□□ -2.08
SH3D21A4FU49 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SH3D21A4FU49 RPL23AP6-201ENST00000446637 472 ntBASIC2.06□□□□□ -2.08
SH3D21A4FU49 AC099513.1-201ENST00000490423 301 ntBASIC2.06□□□□□ -2.08
SH3D21A4FU49 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.06□□□□□ -2.08
SH3D21A4FU49 MIR376B-201ENST00000614515 100 ntBASIC2.06□□□□□ -2.08
SH3D21A4FU49 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.06□□□□□ -2.08
SH3D21A4FU49 RNU6-342P-201ENST00000384521 104 ntBASIC2.05□□□□□ -2.08
SH3D21A4FU49 Y_RNA.537-201ENST00000384626 109 ntBASIC2.05□□□□□ -2.08
SH3D21A4FU49 RNU6-972P-201ENST00000391208 107 ntBASIC2.05□□□□□ -2.08
SH3D21A4FU49 AC245047.7-201ENST00000440265 293 ntBASIC2.05□□□□□ -2.08
SH3D21A4FU49 RNU7-2P-201ENST00000516096 62 ntBASIC2.05□□□□□ -2.08
SH3D21A4FU49 RNU6-267P-201ENST00000516714 103 ntBASIC2.05□□□□□ -2.08
SH3D21A4FU49 MIR4287-201ENST00000579398 78 ntBASIC2.05□□□□□ -2.08
SH3D21A4FU49 AL096840.1-201ENST00000603287 93 ntBASIC2.05□□□□□ -2.08
SH3D21A4FU49 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SH3D21A4FU49 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SH3D21A4FU49 RNU6-457P-201ENST00000363999 107 ntBASIC2.04□□□□□ -2.08
SH3D21A4FU49 Y_RNA.247-201ENST00000364500 92 ntBASIC2.04□□□□□ -2.08
SH3D21A4FU49 RNU6-1276P-201ENST00000365372 104 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms