Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 MIR7-2-201ENST00000384970 110 ntBASIC2.43□□□□□ -2.02
SPG7Q9UQ90 RPL23AP6-201ENST00000446637 472 ntBASIC2.43□□□□□ -2.02
SPG7Q9UQ90 RPS29P29-201ENST00000456396 171 ntBASIC2.43□□□□□ -2.02
SPG7Q9UQ90 RNU7-45P-201ENST00000459460 63 ntBASIC2.43□□□□□ -2.02
SPG7Q9UQ90 RNU7-123P-201ENST00000515911 60 ntBASIC2.43□□□□□ -2.02
SPG7Q9UQ90 MIR6840-201ENST00000611937 71 ntBASIC2.43□□□□□ -2.02
SPG7Q9UQ90 AC243994.1-201ENST00000618627 109 ntBASIC2.43□□□□□ -2.02
SPG7Q9UQ90 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SPG7Q9UQ90 Y_RNA.4-201ENST00000362333 112 ntBASIC2.42□□□□□ -2.02
SPG7Q9UQ90 RNU6-880P-201ENST00000384526 107 ntBASIC2.42□□□□□ -2.02
SPG7Q9UQ90 MIR144-201ENST00000384886 86 ntBASIC2.42□□□□□ -2.02
SPG7Q9UQ90 MIR513A1-201ENST00000385138 129 ntBASIC2.42□□□□□ -2.02
SPG7Q9UQ90 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.42□□□□□ -2.02
SPG7Q9UQ90 SNORD13-201ENST00000459299 104 ntBASIC2.42□□□□□ -2.02
SPG7Q9UQ90 AC090255.1-201ENST00000495779 349 ntBASIC2.42□□□□□ -2.02
SPG7Q9UQ90 RNU7-53P-201ENST00000516705 60 ntBASIC2.42□□□□□ -2.02
SPG7Q9UQ90 RNU1-40P-201ENST00000516816 164 ntBASIC2.42□□□□□ -2.02
SPG7Q9UQ90 RNU1-97P-201ENST00000516872 164 ntBASIC2.42□□□□□ -2.02
SPG7Q9UQ90 RNU6-250P-201ENST00000516958 103 ntBASIC2.42□□□□□ -2.02
SPG7Q9UQ90 AC022254.1-201ENST00000567857 235 ntBASIC2.42□□□□□ -2.02
SPG7Q9UQ90 AC021613.1-201ENST00000623880 111 ntBASIC2.42□□□□□ -2.02
SPG7Q9UQ90 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.42□□□□□ -2.02
SPG7Q9UQ90 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SPG7Q9UQ90 AL161935.2-201ENST00000414627 60 ntBASIC2.41□□□□□ -2.02
SPG7Q9UQ90 RNA5SP233-201ENST00000459153 113 ntBASIC2.41□□□□□ -2.02
SPG7Q9UQ90 RPS29P11-201ENST00000496507 171 ntBASIC2.41□□□□□ -2.02
SPG7Q9UQ90 AC108729.3-201ENST00000513484 108 ntBASIC2.41□□□□□ -2.02
SPG7Q9UQ90 RNU2-13P-201ENST00000515909 113 ntBASIC2.41□□□□□ -2.02
SPG7Q9UQ90 MIR4791-201ENST00000607666 84 ntBASIC2.41□□□□□ -2.02
SPG7Q9UQ90 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.4□□□□□ -2.02
SPG7Q9UQ90 AL596028.1-201ENST00000326971 197 ntBASIC2.4□□□□□ -2.03
SPG7Q9UQ90 RNU6-661P-201ENST00000362409 107 ntBASIC2.4□□□□□ -2.03
SPG7Q9UQ90 Y_RNA.198-201ENST00000364013 98 ntBASIC2.4□□□□□ -2.03
SPG7Q9UQ90 Y_RNA.213-201ENST00000364178 111 ntBASIC2.4□□□□□ -2.03
SPG7Q9UQ90 SNORA22-201ENST00000383907 134 ntBASIC2.4□□□□□ -2.03
SPG7Q9UQ90 RNU6-1067P-201ENST00000384752 107 ntBASIC2.4□□□□□ -2.03
SPG7Q9UQ90 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.4□□□□□ -2.03
SPG7Q9UQ90 RNU2-35P-201ENST00000516446 142 ntBASIC2.4□□□□□ -2.03
SPG7Q9UQ90 MIR4299-201ENST00000577899 72 ntBASIC2.4□□□□□ -2.03
SPG7Q9UQ90 MIR8081-201ENST00000611533 95 ntBASIC2.4□□□□□ -2.03
SPG7Q9UQ90 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SPG7Q9UQ90 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SPG7Q9UQ90 SNORA24-201ENST00000384096 131 ntBASIC2.39□□□□□ -2.03
SPG7Q9UQ90 RPS27P21-201ENST00000486977 252 ntBASIC2.39□□□□□ -2.03
SPG7Q9UQ90 AC079804.2-201ENST00000490376 200 ntBASIC2.39□□□□□ -2.03
SPG7Q9UQ90 RNU6-322P-201ENST00000516010 103 ntBASIC2.39□□□□□ -2.03
SPG7Q9UQ90 MIR5694-201ENST00000581190 76 ntBASIC2.39□□□□□ -2.03
SPG7Q9UQ90 MIR4713-201ENST00000582691 75 ntBASIC2.39□□□□□ -2.03
SPG7Q9UQ90 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.39□□□□□ -2.03
SPG7Q9UQ90 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SPG7Q9UQ90 RNA5SP138-201ENST00000365098 114 ntBASIC2.38□□□□□ -2.03
SPG7Q9UQ90 SNORA51.10-201ENST00000384418 136 ntBASIC2.38□□□□□ -2.03
SPG7Q9UQ90 Y_RNA.537-201ENST00000384626 109 ntBASIC2.38□□□□□ -2.03
SPG7Q9UQ90 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SPG7Q9UQ90 RNA5SP144-201ENST00000410846 116 ntBASIC2.38□□□□□ -2.03
SPG7Q9UQ90 AL356379.1-201ENST00000414105 126 ntBASIC2.38□□□□□ -2.03
SPG7Q9UQ90 AC063976.4-201ENST00000421971 163 ntBASIC2.38□□□□□ -2.03
SPG7Q9UQ90 PDCD5P2-201ENST00000507570 312 ntBASIC2.38□□□□□ -2.03
SPG7Q9UQ90 RNU6-1053P-201ENST00000515930 101 ntBASIC2.38□□□□□ -2.03
SPG7Q9UQ90 RNU7-43P-201ENST00000516554 64 ntBASIC2.38□□□□□ -2.03
SPG7Q9UQ90 AC022523.2-201ENST00000561045 150 ntBASIC2.38□□□□□ -2.03
SPG7Q9UQ90 AC007012.1-201ENST00000567192 175 ntBASIC2.38□□□□□ -2.03
SPG7Q9UQ90 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.38□□□□□ -2.03
SPG7Q9UQ90 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SPG7Q9UQ90 RNA5SP37-201ENST00000365420 130 ntBASIC2.37□□□□□ -2.03
SPG7Q9UQ90 MIR759-201ENST00000390224 91 ntBASIC2.37□□□□□ -2.03
SPG7Q9UQ90 MIR4764-201ENST00000580680 88 ntBASIC2.37□□□□□ -2.03
SPG7Q9UQ90 AL627230.6-201ENST00000611129 280 ntBASIC2.37□□□□□ -2.03
SPG7Q9UQ90 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.36□□□□□ -2.03
SPG7Q9UQ90 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SPG7Q9UQ90 MIR378A-201ENST00000362177 66 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 RNU6-1104P-201ENST00000384723 104 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 MIR520C-201ENST00000385005 87 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 MIR653-201ENST00000385279 96 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 MT-TI-201ENST00000387365 69 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 RNU6-913P-201ENST00000390913 95 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 AL451046.2-201ENST00000403074 277 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 RNU6-1190P-201ENST00000410811 104 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 AL022718.1-201ENST00000412004 84 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 MIR4255-201ENST00000579351 72 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 snoU13.31-201ENST00000607291 104 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 AC008133.2-201ENST00000624540 351 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.36□□□□□ -2.03
SPG7Q9UQ90 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SPG7Q9UQ90 RNU6-153P-201ENST00000364422 104 ntBASIC2.35□□□□□ -2.03
SPG7Q9UQ90 RNU7-73P-201ENST00000458743 63 ntBASIC2.35□□□□□ -2.03
SPG7Q9UQ90 MIR8074-201ENST00000615081 81 ntBASIC2.35□□□□□ -2.03
SPG7Q9UQ90 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SPG7Q9UQ90 RNU6-1319P-201ENST00000390855 104 ntBASIC2.34□□□□□ -2.03
SPG7Q9UQ90 RNU6-747P-201ENST00000390928 104 ntBASIC2.34□□□□□ -2.03
SPG7Q9UQ90 RNU6-241P-201ENST00000391148 104 ntBASIC2.34□□□□□ -2.03
SPG7Q9UQ90 RNU6-177P-201ENST00000411257 104 ntBASIC2.34□□□□□ -2.03
SPG7Q9UQ90 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.34□□□□□ -2.03
SPG7Q9UQ90 RNU6-922P-201ENST00000516753 99 ntBASIC2.34□□□□□ -2.03
SPG7Q9UQ90 DNAJC19P9-201ENST00000555084 351 ntBASIC2.34□□□□□ -2.03
SPG7Q9UQ90 SNORA77B-201ENST00000578179 125 ntBASIC2.34□□□□□ -2.03
SPG7Q9UQ90 MIR3152-201ENST00000579801 74 ntBASIC2.34□□□□□ -2.03
SPG7Q9UQ90 AL020996.3-201ENST00000606617 222 ntBASIC2.34□□□□□ -2.03
SPG7Q9UQ90 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.34□□□□□ -2.03
SPG7Q9UQ90 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms