Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AC011753.1-201ENST00000451001 220 ntBASIC2.67□□□□□ -1.98
PHACTR1Q9C0D0 RNU7-43P-201ENST00000516554 64 ntBASIC2.67□□□□□ -1.98
PHACTR1Q9C0D0 MIR4439-201ENST00000583746 80 ntBASIC2.67□□□□□ -1.98
PHACTR1Q9C0D0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PHACTR1Q9C0D0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 RNY1P1-201ENST00000364372 112 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 Y_RNA.354-201ENST00000365448 111 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 RNU6-972P-201ENST00000391208 107 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 RNU6-887P-201ENST00000410660 100 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 RNA5SP100-201ENST00000410903 110 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 RNA5SP59-201ENST00000410922 110 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 RNU7-2P-201ENST00000516096 62 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 AL137847.3-201ENST00000611521 109 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 IGLL4P-201ENST00000614590 133 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.66□□□□□ -1.98
PHACTR1Q9C0D0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
PHACTR1Q9C0D0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.65□□□□□ -1.99
PHACTR1Q9C0D0 Y_RNA.467-201ENST00000384297 102 ntBASIC2.65□□□□□ -1.99
PHACTR1Q9C0D0 SNORD78.1-201ENST00000390866 65 ntBASIC2.65□□□□□ -1.99
PHACTR1Q9C0D0 AC245047.7-201ENST00000440265 293 ntBASIC2.65□□□□□ -1.99
PHACTR1Q9C0D0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.65□□□□□ -1.99
PHACTR1Q9C0D0 SNORD14A-201ENST00000606526 91 ntBASIC2.65□□□□□ -1.99
PHACTR1Q9C0D0 AC008133.2-201ENST00000624540 351 ntBASIC2.65□□□□□ -1.99
PHACTR1Q9C0D0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 RNU6-342P-201ENST00000384521 104 ntBASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 RNU6-360P-201ENST00000390944 104 ntBASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 RNA5SP210-201ENST00000391034 120 ntBASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 AL023284.1-201ENST00000403956 276 ntBASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 RNU2-40P-201ENST00000410833 196 ntBASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 AC087499.2-201ENST00000432861 149 ntBASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 RNU7-35P-201ENST00000517174 62 ntBASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 MIR8065-201ENST00000620577 100 ntBASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 Z97988.1-201ENST00000637697 135 ntBASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PHACTR1Q9C0D0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.63□□□□□ -1.99
PHACTR1Q9C0D0 RNA5SP450-201ENST00000411206 102 ntBASIC2.63□□□□□ -1.99
PHACTR1Q9C0D0 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.63□□□□□ -1.99
PHACTR1Q9C0D0 AC022137.1-201ENST00000483735 151 ntBASIC2.63□□□□□ -1.99
PHACTR1Q9C0D0 MIR4764-201ENST00000580680 88 ntBASIC2.63□□□□□ -1.99
PHACTR1Q9C0D0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
PHACTR1Q9C0D0 RNU1-112P-201ENST00000364401 164 ntBASIC2.62□□□□□ -1.99
PHACTR1Q9C0D0 RNU6-675P-201ENST00000384236 104 ntBASIC2.62□□□□□ -1.99
PHACTR1Q9C0D0 SNORD116-22-201ENST00000384430 92 ntBASIC2.62□□□□□ -1.99
PHACTR1Q9C0D0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.62□□□□□ -1.99
PHACTR1Q9C0D0 SNORA31.17-201ENST00000516953 127 ntBASIC2.62□□□□□ -1.99
PHACTR1Q9C0D0 AL033523.1-201ENST00000605153 153 ntBASIC2.62□□□□□ -1.99
PHACTR1Q9C0D0 MIR376B-201ENST00000614515 100 ntBASIC2.62□□□□□ -1.99
PHACTR1Q9C0D0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.62□□□□□ -1.99
PHACTR1Q9C0D0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
PHACTR1Q9C0D0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 AC005336.3-201ENST00000623833 2679 ntBASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 Y_RNA.190-201ENST00000363964 101 ntBASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 RNA5SP456-201ENST00000364002 114 ntBASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 RNU6-813P-201ENST00000384691 107 ntBASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 MIR206-201ENST00000384872 86 ntBASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 AC090844.1-201ENST00000422019 156 ntBASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 AC109327.2-201ENST00000448339 378 ntBASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 AC234781.5-201ENST00000508429 271 ntBASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 RN7SKP132-201ENST00000516001 208 ntBASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 RNU6-917P-201ENST00000516294 104 ntBASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 SNORA31.25-201ENST00000517242 134 ntBASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
PHACTR1Q9C0D0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PHACTR1Q9C0D0 MIR144-201ENST00000384886 86 ntBASIC2.6□□□□□ -1.99
PHACTR1Q9C0D0 MIR520C-201ENST00000385005 87 ntBASIC2.6□□□□□ -1.99
PHACTR1Q9C0D0 RNU6-602P-201ENST00000411155 105 ntBASIC2.6□□□□□ -1.99
PHACTR1Q9C0D0 UBL5P1-201ENST00000507979 193 ntBASIC2.6□□□□□ -1.99
PHACTR1Q9C0D0 MIR4529-201ENST00000578110 78 ntBASIC2.6□□□□□ -1.99
PHACTR1Q9C0D0 MIR6895-201ENST00000613497 78 ntBASIC2.6□□□□□ -1.99
PHACTR1Q9C0D0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.6□□□□□ -1.99
PHACTR1Q9C0D0 SNORD116-10-201ENST00000363791 102 ntBASIC2.59□□□□□ -1.99
PHACTR1Q9C0D0 SNORD38.1-201ENST00000363863 68 ntBASIC2.59□□□□□ -1.99
PHACTR1Q9C0D0 RNU6-242P-201ENST00000384359 107 ntBASIC2.59□□□□□ -1.99
PHACTR1Q9C0D0 RNU6-1006P-201ENST00000516998 103 ntBASIC2.59□□□□□ -1.99
PHACTR1Q9C0D0 CYP3A52P-201ENST00000563326 91 ntBASIC2.59□□□□□ -1.99
PHACTR1Q9C0D0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.59□□□□□ -1.99
PHACTR1Q9C0D0 MIR3202-2-201ENST00000635980 79 ntBASIC2.59□□□□□ -1.99
PHACTR1Q9C0D0 Y_RNA.140-201ENST00000363474 103 ntBASIC2.58□□□□□ -2
PHACTR1Q9C0D0 Y_RNA.247-201ENST00000364500 92 ntBASIC2.58□□□□□ -2
PHACTR1Q9C0D0 U8.15-201ENST00000390947 134 ntBASIC2.58□□□□□ -2
PHACTR1Q9C0D0 AL445685.2-201ENST00000422551 342 ntBASIC2.58□□□□□ -2
PHACTR1Q9C0D0 RPL39P39-201ENST00000455840 151 ntBASIC2.58□□□□□ -2
PHACTR1Q9C0D0 AC079600.2-201ENST00000550076 130 ntBASIC2.58□□□□□ -2
PHACTR1Q9C0D0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.58□□□□□ -2
PHACTR1Q9C0D0 SNORA3A-201ENST00000364113 130 ntBASIC2.57□□□□□ -2
PHACTR1Q9C0D0 RNU6-203P-201ENST00000384038 104 ntBASIC2.57□□□□□ -2
PHACTR1Q9C0D0 RNU6-1307P-201ENST00000391012 103 ntBASIC2.57□□□□□ -2
PHACTR1Q9C0D0 RNU6-402P-201ENST00000410678 103 ntBASIC2.57□□□□□ -2
PHACTR1Q9C0D0 RNU6-1086P-201ENST00000410930 100 ntBASIC2.57□□□□□ -2
PHACTR1Q9C0D0 RNU7-79P-201ENST00000516082 62 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms