Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU5F-1-201ENST00000362507 117 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU4-58P-201ENST00000363192 141 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU1-33P-201ENST00000364249 162 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 SNORA67.4-201ENST00000384688 142 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR520H-201ENST00000385126 88 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 SNORD41-201ENST00000386967 70 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-587P-201ENST00000391282 106 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 SNORD105B-201ENST00000458770 79 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 AC025518.1-201ENST00000479856 347 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 AP004217.1-201ENST00000480579 346 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-922P-201ENST00000516753 99 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 RNA5SP380-201ENST00000517190 98 ntBASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
KRTAP3-1Q9BYR8 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP3-1Q9BYR8 MAPK10-266ENST00000641066 6555 ntBASIC1.65□□□□□ -2.14
KRTAP3-1Q9BYR8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU4-35P-201ENST00000362588 141 ntBASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 SNORA46-201ENST00000384762 135 ntBASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 Y_RNA.596-201ENST00000410462 109 ntBASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU6-687P-201ENST00000516443 89 ntBASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU6-56P-201ENST00000516986 93 ntBASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 AC007224.1-201ENST00000564410 144 ntBASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 AP000942.3-201ENST00000603702 160 ntBASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP3-1Q9BYR8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP3-1Q9BYR8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP3-1Q9BYR8 MIRLET7F1-201ENST00000362202 87 ntBASIC1.64□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU6-205P-201ENST00000390858 107 ntBASIC1.64□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU2-59P-201ENST00000410482 191 ntBASIC1.64□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU6-628P-201ENST00000410675 107 ntBASIC1.64□□□□□ -2.15
KRTAP3-1Q9BYR8 SNORD63B-201ENST00000411005 70 ntBASIC1.64□□□□□ -2.15
KRTAP3-1Q9BYR8 AC007448.1-201ENST00000582714 234 ntBASIC1.64□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR3192-201ENST00000584920 77 ntBASIC1.64□□□□□ -2.15
KRTAP3-1Q9BYR8 AC019176.2-201ENST00000611579 315 ntBASIC1.64□□□□□ -2.15
KRTAP3-1Q9BYR8 AC009093.8-201ENST00000641769 292 ntBASIC1.64□□□□□ -2.15
KRTAP3-1Q9BYR8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP3-1Q9BYR8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR377-201ENST00000362145 69 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 Y_RNA.12-201ENST00000362393 112 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR518E-201ENST00000385252 88 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 SNORD30.1-201ENST00000391309 70 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR937-201ENST00000401271 86 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR1302-7-201ENST00000408841 72 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 HMGN2P35-201ENST00000412164 270 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 AC074348.1-201ENST00000426503 132 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 RPL30P7-201ENST00000479312 323 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU6-531P-201ENST00000516694 104 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 AC023632.4-201ENST00000517783 191 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 YWHAEP2-201ENST00000580066 112 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 YWHAEP3-201ENST00000582767 121 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR7851-201ENST00000610611 160 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 AL121772.2-201ENST00000614331 297 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP3-1Q9BYR8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 SNORA25.3-201ENST00000363205 127 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU6-957P-201ENST00000363652 99 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR154-201ENST00000385243 84 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR1265-201ENST00000408444 86 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 AL161935.2-201ENST00000414627 60 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 JTBP1-201ENST00000441314 247 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 UQCRHP3-201ENST00000451503 251 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 AC092185.1-201ENST00000491371 97 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 RN7SL274P-201ENST00000492268 272 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU6-1194P-201ENST00000516208 104 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU1-95P-201ENST00000516357 160 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU1-128P-201ENST00000516704 160 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR2116-201ENST00000517221 80 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR2682-201ENST00000580305 110 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU7-10P-201ENST00000607194 63 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 AC016717.2-201ENST00000609089 5141 ntBASIC1.62□□□□□ -2.15
KRTAP3-1Q9BYR8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP3-1Q9BYR8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP3-1Q9BYR8 AC073325.2-201ENST00000339545 159 ntBASIC1.61□□□□□ -2.15
KRTAP3-1Q9BYR8 RNY4P3-201ENST00000365254 95 ntBASIC1.61□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR141-201ENST00000384975 95 ntBASIC1.61□□□□□ -2.15
KRTAP3-1Q9BYR8 SNORD93-201ENST00000408813 74 ntBASIC1.61□□□□□ -2.15
KRTAP3-1Q9BYR8 AC004975.1-201ENST00000428733 208 ntBASIC1.61□□□□□ -2.15
KRTAP3-1Q9BYR8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC1.61□□□□□ -2.15
KRTAP3-1Q9BYR8 SNORA31.25-201ENST00000517242 134 ntBASIC1.61□□□□□ -2.15
KRTAP3-1Q9BYR8 GHRLOS.1-201ENST00000610995 70 ntBASIC1.61□□□□□ -2.15
KRTAP3-1Q9BYR8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms