Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.5□□□□□ -2.01
SOX4Q06945 RNA5SP393-201ENST00000363423 117 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 Y_RNA.467-201ENST00000384297 102 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 MIR526A1-201ENST00000384897 85 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 MIR518A2-201ENST00000384966 87 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 RNA5SP465-201ENST00000391195 109 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 MIR1261-201ENST00000408659 82 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 SNORA31.15-201ENST00000516771 132 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 Y_RNA.705-201ENST00000516862 110 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 SUB1P4-201ENST00000566062 339 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 MIR4709-201ENST00000577272 72 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 MIR5007-201ENST00000583098 95 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 AC096720.1-201ENST00000604441 183 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 AL513423.1-201ENST00000621695 132 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 AP006437.1-201ENST00000641440 3685 ntBASIC2.49□□□□□ -2.01
SOX4Q06945 RNU6-1313P-201ENST00000362622 102 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 U8.2-201ENST00000363156 134 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 RNU6-1124P-201ENST00000384169 107 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 MIR660-201ENST00000385235 97 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 SNORA48.1-201ENST00000390879 135 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 RPL39P39-201ENST00000455840 151 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.48□□□□□ -2.01
SOX4Q06945 MIR4446-201ENST00000578505 67 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 MIR3670-2-201ENST00000582974 65 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 MIR3670-1-201ENST00000584160 65 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 MIR4658-201ENST00000584344 65 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 MIR3670-3-201ENST00000584855 65 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 MIR3670-4-201ENST00000612260 65 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 AP000648.3-201ENST00000623539 4507 ntBASIC2.48□□□□□ -2.01
SOX4Q06945 RNU6-228P-201ENST00000362700 106 ntBASIC2.47□□□□□ -2.01
SOX4Q06945 RNU6-112P-201ENST00000363599 104 ntBASIC2.47□□□□□ -2.01
SOX4Q06945 RNU6-296P-201ENST00000384608 107 ntBASIC2.47□□□□□ -2.01
SOX4Q06945 RNU6-1067P-201ENST00000384752 107 ntBASIC2.47□□□□□ -2.01
SOX4Q06945 RNU6-972P-201ENST00000391208 107 ntBASIC2.47□□□□□ -2.01
SOX4Q06945 RNU6-887P-201ENST00000410660 100 ntBASIC2.47□□□□□ -2.01
SOX4Q06945 AC010297.1-201ENST00000623948 149 ntBASIC2.47□□□□□ -2.01
SOX4Q06945 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SOX4Q06945 Y_RNA.73-201ENST00000362910 113 ntBASIC2.46□□□□□ -2.02
SOX4Q06945 RNU1-51P-201ENST00000365345 176 ntBASIC2.46□□□□□ -2.02
SOX4Q06945 RNU1-138P-201ENST00000384093 164 ntBASIC2.46□□□□□ -2.02
SOX4Q06945 SNORD116-22-201ENST00000384430 92 ntBASIC2.46□□□□□ -2.02
SOX4Q06945 Y_RNA.537-201ENST00000384626 109 ntBASIC2.46□□□□□ -2.02
SOX4Q06945 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.46□□□□□ -2.02
SOX4Q06945 RNA5SP425-201ENST00000410336 112 ntBASIC2.46□□□□□ -2.02
SOX4Q06945 HMGN1P33-201ENST00000432945 451 ntBASIC2.46□□□□□ -2.02
SOX4Q06945 AC099513.1-201ENST00000490423 301 ntBASIC2.46□□□□□ -2.02
SOX4Q06945 AC108729.3-201ENST00000513484 108 ntBASIC2.46□□□□□ -2.02
SOX4Q06945 SNORD3E-202ENST00000627253 216 ntBASIC2.46□□□□□ -2.02
SOX4Q06945 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SOX4Q06945 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SOX4Q06945 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SOX4Q06945 SNORA1.1-201ENST00000364671 133 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 SNORD115-35-201ENST00000365122 82 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 RNU6-497P-201ENST00000365316 104 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 RNU6-675P-201ENST00000384236 104 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 RNU6-242P-201ENST00000384359 107 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SOX4Q06945 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 RNU6-402P-201ENST00000410678 103 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 RNU2-40P-201ENST00000410833 196 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 RNA5SP501-201ENST00000410990 112 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 AL356320.1-201ENST00000429616 163 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.45□□□□□ -2.02
SOX4Q06945 snoU13.27-201ENST00000459278 104 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 MIR3202-2-201ENST00000635980 79 ntBASIC2.45□□□□□ -2.02
SOX4Q06945 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SOX4Q06945 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
SOX4Q06945 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SOX4Q06945 RNU6-1276P-201ENST00000365372 104 ntBASIC2.44□□□□□ -2.02
SOX4Q06945 HMGN2P39-201ENST00000398005 273 ntBASIC2.44□□□□□ -2.02
SOX4Q06945 RNA5SP481-201ENST00000516814 122 ntBASIC2.44□□□□□ -2.02
SOX4Q06945 MIR1273D-201ENST00000577266 86 ntBASIC2.44□□□□□ -2.02
SOX4Q06945 MIR4439-201ENST00000583746 80 ntBASIC2.44□□□□□ -2.02
SOX4Q06945 FAM106DP-201ENST00000586416 501 ntBASIC2.44□□□□□ -2.02
SOX4Q06945 AL049779.4-201ENST00000604500 156 ntBASIC2.44□□□□□ -2.02
SOX4Q06945 MIR8055-201ENST00000610739 97 ntBASIC2.44□□□□□ -2.02
SOX4Q06945 MIR6766-201ENST00000622641 72 ntBASIC2.44□□□□□ -2.02
SOX4Q06945 SNORA67.1-201ENST00000364749 141 ntBASIC2.43□□□□□ -2.02
SOX4Q06945 MIR221-201ENST00000385135 110 ntBASIC2.43□□□□□ -2.02
SOX4Q06945 MIR524-201ENST00000385242 87 ntBASIC2.43□□□□□ -2.02
SOX4Q06945 MIR1255A-201ENST00000408338 113 ntBASIC2.43□□□□□ -2.02
SOX4Q06945 RNA5SP225-201ENST00000410874 135 ntBASIC2.43□□□□□ -2.02
SOX4Q06945 RPL23AP6-201ENST00000446637 472 ntBASIC2.43□□□□□ -2.02
SOX4Q06945 snoU13.16-201ENST00000459350 104 ntBASIC2.43□□□□□ -2.02
SOX4Q06945 RNU7-2P-201ENST00000516096 62 ntBASIC2.43□□□□□ -2.02
SOX4Q06945 MIR376B-201ENST00000614515 100 ntBASIC2.43□□□□□ -2.02
SOX4Q06945 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.43□□□□□ -2.02
SOX4Q06945 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SOX4Q06945 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.43□□□□□ -2.02
SOX4Q06945 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
SOX4Q06945 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SOX4Q06945 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SOX4Q06945 RNU6-457P-201ENST00000363999 107 ntBASIC2.42□□□□□ -2.02
SOX4Q06945 RNU6-342P-201ENST00000384521 104 ntBASIC2.42□□□□□ -2.02
SOX4Q06945 AC245047.7-201ENST00000440265 293 ntBASIC2.42□□□□□ -2.02
SOX4Q06945 UBL5P1-201ENST00000507979 193 ntBASIC2.42□□□□□ -2.02
SOX4Q06945 RNU6-267P-201ENST00000516714 103 ntBASIC2.42□□□□□ -2.02
SOX4Q06945 SNORA74.3-201ENST00000517108 154 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms