Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RNY4P3-201ENST00000365254 95 ntBASIC3.62□□□□□ -1.83
NUBP1P53384 RNA5SP341-201ENST00000516261 117 ntBASIC3.62□□□□□ -1.83
NUBP1P53384 AP003355.3-201ENST00000623465 114 ntBASIC3.62□□□□□ -1.83
NUBP1P53384 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.62□□□□□ -1.83
NUBP1P53384 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
NUBP1P53384 Y_RNA.36-201ENST00000362602 112 ntBASIC3.61□□□□□ -1.83
NUBP1P53384 SNORA5B-201ENST00000363786 132 ntBASIC3.61□□□□□ -1.83
NUBP1P53384 SNORD17-201ENST00000390930 237 ntBASIC3.61□□□□□ -1.83
NUBP1P53384 CYP4A43P-201ENST00000568156 121 ntBASIC3.61□□□□□ -1.83
NUBP1P53384 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NUBP1P53384 RNU1-89P-201ENST00000384592 164 ntBASIC3.6□□□□□ -1.83
NUBP1P53384 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NUBP1P53384 SNORD111.1-201ENST00000516421 86 ntBASIC3.6□□□□□ -1.83
NUBP1P53384 MIR4264-201ENST00000583520 66 ntBASIC3.6□□□□□ -1.83
NUBP1P53384 AL591424.2-201ENST00000617023 128 ntBASIC3.6□□□□□ -1.83
NUBP1P53384 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.6□□□□□ -1.83
NUBP1P53384 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.6□□□□□ -1.83
NUBP1P53384 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
NUBP1P53384 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NUBP1P53384 RNU4-58P-201ENST00000363192 141 ntBASIC3.59□□□□□ -1.83
NUBP1P53384 MIR942-201ENST00000401111 86 ntBASIC3.59□□□□□ -1.83
NUBP1P53384 RNU6-237P-201ENST00000515985 71 ntBASIC3.59□□□□□ -1.83
NUBP1P53384 RNU7-156P-201ENST00000517214 74 ntBASIC3.59□□□□□ -1.83
NUBP1P53384 MIR3162-201ENST00000581818 82 ntBASIC3.59□□□□□ -1.83
NUBP1P53384 SNORA50A-202ENST00000629536 136 ntBASIC3.59□□□□□ -1.83
NUBP1P53384 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUBP1P53384 MIR422A-201ENST00000362286 90 ntBASIC3.58□□□□□ -1.84
NUBP1P53384 RNU6-957P-201ENST00000363652 99 ntBASIC3.58□□□□□ -1.84
NUBP1P53384 RNU6-681P-201ENST00000364012 104 ntBASIC3.58□□□□□ -1.84
NUBP1P53384 RNU6-1165P-201ENST00000410119 107 ntBASIC3.58□□□□□ -1.84
NUBP1P53384 Z96811.1-201ENST00000445880 108 ntBASIC3.58□□□□□ -1.84
NUBP1P53384 AC003982.1-202ENST00000469928 248 ntBASIC3.58□□□□□ -1.84
NUBP1P53384 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.58□□□□□ -1.84
NUBP1P53384 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
NUBP1P53384 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.58□□□□□ -1.84
NUBP1P53384 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.58□□□□□ -1.84
NUBP1P53384 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.57□□□□□ -1.84
NUBP1P53384 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUBP1P53384 MIR30D-201ENST00000362283 70 ntBASIC3.57□□□□□ -1.84
NUBP1P53384 MT-TF-201ENST00000387314 71 ntBASIC3.57□□□□□ -1.84
NUBP1P53384 RNU7-106P-201ENST00000459514 67 ntBASIC3.57□□□□□ -1.84
NUBP1P53384 MIR6740-201ENST00000618268 113 ntBASIC3.57□□□□□ -1.84
NUBP1P53384 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.57□□□□□ -1.84
NUBP1P53384 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUBP1P53384 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.57□□□□□ -1.84
NUBP1P53384 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUBP1P53384 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NUBP1P53384 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUBP1P53384 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NUBP1P53384 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUBP1P53384 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
NUBP1P53384 Y_RNA.42-201ENST00000362660 108 ntBASIC3.56□□□□□ -1.84
NUBP1P53384 SNORD115-31-201ENST00000365318 82 ntBASIC3.56□□□□□ -1.84
NUBP1P53384 SNORD63B-201ENST00000411005 70 ntBASIC3.56□□□□□ -1.84
NUBP1P53384 AC244636.1-201ENST00000421152 228 ntBASIC3.56□□□□□ -1.84
NUBP1P53384 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.56□□□□□ -1.84
NUBP1P53384 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.56□□□□□ -1.84
NUBP1P53384 NDUFB9P3-201ENST00000521269 501 ntBASIC3.56□□□□□ -1.84
NUBP1P53384 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.56□□□□□ -1.84
NUBP1P53384 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.56□□□□□ -1.84
NUBP1P53384 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.56□□□□□ -1.84
NUBP1P53384 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
NUBP1P53384 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NUBP1P53384 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUBP1P53384 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUBP1P53384 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.55□□□□□ -1.84
NUBP1P53384 RNU4-82P-201ENST00000362443 140 ntBASIC3.55□□□□□ -1.84
NUBP1P53384 HMGN2P35-201ENST00000412164 270 ntBASIC3.55□□□□□ -1.84
NUBP1P53384 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.55□□□□□ -1.84
NUBP1P53384 RNU6-1194P-201ENST00000516208 104 ntBASIC3.55□□□□□ -1.84
NUBP1P53384 MAPK10-373ENST00000641983 6772 ntBASIC3.55□□□□□ -1.84
NUBP1P53384 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUBP1P53384 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.55□□□□□ -1.84
NUBP1P53384 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUBP1P53384 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.55□□□□□ -1.84
NUBP1P53384 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.55□□□□□ -1.84
NUBP1P53384 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUBP1P53384 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NUBP1P53384 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NUBP1P53384 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NUBP1P53384 MIR449A-201ENST00000362113 91 ntBASIC3.54□□□□□ -1.84
NUBP1P53384 Y_RNA.239-201ENST00000364444 113 ntBASIC3.54□□□□□ -1.84
NUBP1P53384 RNU6-1051P-201ENST00000365471 102 ntBASIC3.54□□□□□ -1.84
NUBP1P53384 RNU6-895P-201ENST00000384125 103 ntBASIC3.54□□□□□ -1.84
NUBP1P53384 AC004965.1-201ENST00000413033 213 ntBASIC3.54□□□□□ -1.84
NUBP1P53384 AL139132.1-201ENST00000431587 344 ntBASIC3.54□□□□□ -1.84
NUBP1P53384 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.54□□□□□ -1.84
NUBP1P53384 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NUBP1P53384 Y_RNA.371-201ENST00000365591 113 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 SNORA44-201ENST00000384584 132 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 RNA5SP100-201ENST00000410903 110 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 RNA5SP59-201ENST00000410922 110 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 RNA5SP306-201ENST00000411087 107 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.53□□□□□ -1.84
NUBP1P53384 RNU7-62P-201ENST00000458856 62 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 RNU6-531P-201ENST00000516694 104 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 SNORA70.18-201ENST00000516696 98 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 IGKV2-26-201ENST00000518305 343 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 RNU7-10P-201ENST00000607194 63 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms