Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 Y_RNA.508-201ENST00000384502 114 ntBASIC2.65□□□□□ -1.99
RARAP10276 Y_RNA.537-201ENST00000384626 109 ntBASIC2.65□□□□□ -1.99
RARAP10276 RNA5SP501-201ENST00000410990 112 ntBASIC2.65□□□□□ -1.99
RARAP10276 MIR4658-201ENST00000584344 65 ntBASIC2.65□□□□□ -1.99
RARAP10276 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
RARAP10276 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RARAP10276 SNORA1.1-201ENST00000364671 133 ntBASIC2.64□□□□□ -1.99
RARAP10276 Y_RNA.467-201ENST00000384297 102 ntBASIC2.64□□□□□ -1.99
RARAP10276 snoU13.26-201ENST00000459452 105 ntBASIC2.64□□□□□ -1.99
RARAP10276 AC022137.1-201ENST00000483735 151 ntBASIC2.64□□□□□ -1.99
RARAP10276 RNA5SP481-201ENST00000516814 122 ntBASIC2.64□□□□□ -1.99
RARAP10276 Y_RNA.705-201ENST00000516862 110 ntBASIC2.64□□□□□ -1.99
RARAP10276 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.64□□□□□ -1.99
RARAP10276 SNORD3E-202ENST00000627253 216 ntBASIC2.64□□□□□ -1.99
RARAP10276 RNY1P1-201ENST00000364372 112 ntBASIC2.63□□□□□ -1.99
RARAP10276 MIR7-2-201ENST00000384970 110 ntBASIC2.63□□□□□ -1.99
RARAP10276 MIR1287-201ENST00000408492 90 ntBASIC2.63□□□□□ -1.99
RARAP10276 RNA5SP492-201ENST00000411330 114 ntBASIC2.63□□□□□ -1.99
RARAP10276 HMGN1P33-201ENST00000432945 451 ntBASIC2.63□□□□□ -1.99
RARAP10276 RPS12P2-201ENST00000439728 269 ntBASIC2.63□□□□□ -1.99
RARAP10276 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.63□□□□□ -1.99
RARAP10276 AC108938.1-201ENST00000451204 136 ntBASIC2.63□□□□□ -1.99
RARAP10276 AC108729.3-201ENST00000513484 108 ntBASIC2.63□□□□□ -1.99
RARAP10276 RNA5SP356-201ENST00000515972 94 ntBASIC2.63□□□□□ -1.99
RARAP10276 MIR4319-201ENST00000577285 85 ntBASIC2.63□□□□□ -1.99
RARAP10276 AL512310.12-203ENST00000640543 90 ntBASIC2.63□□□□□ -1.99
RARAP10276 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.62□□□□□ -1.99
RARAP10276 AC062016.1-201ENST00000355719 319 ntBASIC2.62□□□□□ -1.99
RARAP10276 RNU6-887P-201ENST00000410660 100 ntBASIC2.62□□□□□ -1.99
RARAP10276 RPL23AP6-201ENST00000446637 472 ntBASIC2.62□□□□□ -1.99
RARAP10276 AC109327.2-201ENST00000448339 378 ntBASIC2.62□□□□□ -1.99
RARAP10276 SNORA31.11-201ENST00000516528 139 ntBASIC2.62□□□□□ -1.99
RARAP10276 RNU6-548P-201ENST00000517083 115 ntBASIC2.62□□□□□ -1.99
RARAP10276 AC096720.1-201ENST00000604441 183 ntBASIC2.62□□□□□ -1.99
RARAP10276 IGLL4P-201ENST00000614590 133 ntBASIC2.62□□□□□ -1.99
RARAP10276 FO624990.1-201ENST00000636373 85 ntBASIC2.62□□□□□ -1.99
RARAP10276 AP006437.1-201ENST00000641440 3685 ntBASIC2.62□□□□□ -1.99
RARAP10276 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RARAP10276 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RARAP10276 MIR424-201ENST00000362227 98 ntBASIC2.61□□□□□ -1.99
RARAP10276 Y_RNA.190-201ENST00000363964 101 ntBASIC2.61□□□□□ -1.99
RARAP10276 SNORD115-35-201ENST00000365122 82 ntBASIC2.61□□□□□ -1.99
RARAP10276 RNU6-675P-201ENST00000384236 104 ntBASIC2.61□□□□□ -1.99
RARAP10276 RNU6-1067P-201ENST00000384752 107 ntBASIC2.61□□□□□ -1.99
RARAP10276 FAM106DP-201ENST00000586416 501 ntBASIC2.61□□□□□ -1.99
RARAP10276 MIR8055-201ENST00000610739 97 ntBASIC2.61□□□□□ -1.99
RARAP10276 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.61□□□□□ -1.99
RARAP10276 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.61□□□□□ -1.99
RARAP10276 RNU6-228P-201ENST00000362700 106 ntBASIC2.6□□□□□ -1.99
RARAP10276 Y_RNA.73-201ENST00000362910 113 ntBASIC2.6□□□□□ -1.99
RARAP10276 RNA5SP456-201ENST00000364002 114 ntBASIC2.6□□□□□ -1.99
RARAP10276 MIR27B-201ENST00000385129 97 ntBASIC2.6□□□□□ -1.99
RARAP10276 RNU6-972P-201ENST00000391208 107 ntBASIC2.6□□□□□ -1.99
RARAP10276 RNU2-40P-201ENST00000410833 196 ntBASIC2.6□□□□□ -1.99
RARAP10276 snoU13.16-201ENST00000459350 104 ntBASIC2.6□□□□□ -1.99
RARAP10276 SNORA74.3-201ENST00000517108 154 ntBASIC2.6□□□□□ -1.99
RARAP10276 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
RARAP10276 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
RARAP10276 Y_RNA.4-201ENST00000362333 112 ntBASIC2.59□□□□□ -1.99
RARAP10276 RNU6-457P-201ENST00000363999 107 ntBASIC2.59□□□□□ -1.99
RARAP10276 RNU6-342P-201ENST00000384521 104 ntBASIC2.59□□□□□ -1.99
RARAP10276 AL603825.1-201ENST00000438481 80 ntBASIC2.59□□□□□ -1.99
RARAP10276 RNU7-2P-201ENST00000516096 62 ntBASIC2.59□□□□□ -1.99
RARAP10276 RNA5SP320-201ENST00000516263 124 ntBASIC2.59□□□□□ -1.99
RARAP10276 MIR4439-201ENST00000583746 80 ntBASIC2.59□□□□□ -1.99
RARAP10276 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
RARAP10276 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RARAP10276 RNU4-82P-201ENST00000362443 140 ntBASIC2.58□□□□□ -2
RARAP10276 Y_RNA.247-201ENST00000364500 92 ntBASIC2.58□□□□□ -2
RARAP10276 RNU6-1124P-201ENST00000384169 107 ntBASIC2.58□□□□□ -2
RARAP10276 SNORD116-22-201ENST00000384430 92 ntBASIC2.58□□□□□ -2
RARAP10276 RNU6-402P-201ENST00000410678 103 ntBASIC2.58□□□□□ -2
RARAP10276 RNA5SP184-201ENST00000411071 108 ntBASIC2.58□□□□□ -2
RARAP10276 AC090844.1-201ENST00000422019 156 ntBASIC2.58□□□□□ -2
RARAP10276 UBL5P1-201ENST00000507979 193 ntBASIC2.58□□□□□ -2
RARAP10276 MIR376B-201ENST00000614515 100 ntBASIC2.58□□□□□ -2
RARAP10276 MIR8065-201ENST00000620577 100 ntBASIC2.58□□□□□ -2
RARAP10276 MIR21-201ENST00000362134 72 ntBASIC2.57□□□□□ -2
RARAP10276 RNU6-497P-201ENST00000365316 104 ntBASIC2.57□□□□□ -2
RARAP10276 MIR196B-201ENST00000384852 84 ntBASIC2.57□□□□□ -2
RARAP10276 MIR206-201ENST00000384872 86 ntBASIC2.57□□□□□ -2
RARAP10276 RNA5SP100-201ENST00000410903 110 ntBASIC2.57□□□□□ -2
RARAP10276 RNA5SP59-201ENST00000410922 110 ntBASIC2.57□□□□□ -2
RARAP10276 AC245047.7-201ENST00000440265 293 ntBASIC2.57□□□□□ -2
RARAP10276 RPL39P39-201ENST00000455840 151 ntBASIC2.57□□□□□ -2
RARAP10276 RNU6-1006P-201ENST00000516998 103 ntBASIC2.57□□□□□ -2
RARAP10276 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.57□□□□□ -2
RARAP10276 RNU7-35P-201ENST00000517174 62 ntBASIC2.57□□□□□ -2
RARAP10276 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.57□□□□□ -2
RARAP10276 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.57□□□□□ -2
RARAP10276 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.57□□□□□ -2
RARAP10276 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.57□□□□□ -2
RARAP10276 MIR3202-2-201ENST00000635980 79 ntBASIC2.57□□□□□ -2
RARAP10276 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
RARAP10276 RNU1-51P-201ENST00000365345 176 ntBASIC2.56□□□□□ -2
RARAP10276 RNU1-138P-201ENST00000384093 164 ntBASIC2.56□□□□□ -2
RARAP10276 SNORA70B-201ENST00000384210 135 ntBASIC2.56□□□□□ -2
RARAP10276 RNU6-813P-201ENST00000384691 107 ntBASIC2.56□□□□□ -2
RARAP10276 RNU6-1307P-201ENST00000391012 103 ntBASIC2.56□□□□□ -2
RARAP10276 RNU6-482P-201ENST00000391068 107 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms