Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 RNU6-460P-201ENST00000391158 108 ntBASIC1.87□□□□□ -2.11
SPTLC3Q9NUV7 RNU1-78P-201ENST00000391248 165 ntBASIC1.87□□□□□ -2.11
SPTLC3Q9NUV7 AL603914.1-201ENST00000401964 204 ntBASIC1.87□□□□□ -2.11
SPTLC3Q9NUV7 RNU2-13P-201ENST00000515909 113 ntBASIC1.87□□□□□ -2.11
SPTLC3Q9NUV7 RNU6-789P-201ENST00000517105 102 ntBASIC1.87□□□□□ -2.11
SPTLC3Q9NUV7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.87□□□□□ -2.11
SPTLC3Q9NUV7 MIR4764-201ENST00000580680 88 ntBASIC1.87□□□□□ -2.11
SPTLC3Q9NUV7 AL353997.5-201ENST00000618886 171 ntBASIC1.87□□□□□ -2.11
SPTLC3Q9NUV7 TUG1_4.1-201ENST00000619464 181 ntBASIC1.87□□□□□ -2.11
SPTLC3Q9NUV7 AC091895.1-201ENST00000624494 256 ntBASIC1.87□□□□□ -2.11
SPTLC3Q9NUV7 U8.1-201ENST00000362843 134 ntBASIC1.86□□□□□ -2.11
SPTLC3Q9NUV7 RNY1P11-201ENST00000363759 113 ntBASIC1.86□□□□□ -2.11
SPTLC3Q9NUV7 RNU6-915P-201ENST00000364943 103 ntBASIC1.86□□□□□ -2.11
SPTLC3Q9NUV7 Y_RNA.351-201ENST00000365436 96 ntBASIC1.86□□□□□ -2.11
SPTLC3Q9NUV7 SNORD41-201ENST00000386967 70 ntBASIC1.86□□□□□ -2.11
SPTLC3Q9NUV7 AC027119.1-201ENST00000440877 241 ntBASIC1.86□□□□□ -2.11
SPTLC3Q9NUV7 Y_RNA.692-201ENST00000516627 105 ntBASIC1.86□□□□□ -2.11
SPTLC3Q9NUV7 RNU6-922P-201ENST00000516753 99 ntBASIC1.86□□□□□ -2.11
SPTLC3Q9NUV7 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.86□□□□□ -2.11
SPTLC3Q9NUV7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.86□□□□□ -2.11
SPTLC3Q9NUV7 SNORA24-201ENST00000384096 131 ntBASIC1.85□□□□□ -2.11
SPTLC3Q9NUV7 SNORD28B-201ENST00000390993 75 ntBASIC1.85□□□□□ -2.11
SPTLC3Q9NUV7 RNU6-257P-201ENST00000410238 98 ntBASIC1.85□□□□□ -2.11
SPTLC3Q9NUV7 AC245517.4-201ENST00000448601 281 ntBASIC1.85□□□□□ -2.11
SPTLC3Q9NUV7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.85□□□□□ -2.11
SPTLC3Q9NUV7 RPS29P29-201ENST00000456396 171 ntBASIC1.85□□□□□ -2.11
SPTLC3Q9NUV7 RPL30P7-201ENST00000479312 323 ntBASIC1.85□□□□□ -2.11
SPTLC3Q9NUV7 RNU6-998P-201ENST00000515894 101 ntBASIC1.85□□□□□ -2.11
SPTLC3Q9NUV7 RNA5SP236-201ENST00000516169 116 ntBASIC1.85□□□□□ -2.11
SPTLC3Q9NUV7 Y_RNA.757-201ENST00000578934 114 ntBASIC1.85□□□□□ -2.11
SPTLC3Q9NUV7 MIR3937-201ENST00000580135 106 ntBASIC1.85□□□□□ -2.11
SPTLC3Q9NUV7 U7.2-201ENST00000607576 63 ntBASIC1.85□□□□□ -2.11
SPTLC3Q9NUV7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SPTLC3Q9NUV7 RNU1-133P-201ENST00000364867 167 ntBASIC1.84□□□□□ -2.11
SPTLC3Q9NUV7 SNORA20-201ENST00000384662 132 ntBASIC1.84□□□□□ -2.11
SPTLC3Q9NUV7 MIR583-201ENST00000384846 75 ntBASIC1.84□□□□□ -2.11
SPTLC3Q9NUV7 Y_RNA.586-201ENST00000391146 98 ntBASIC1.84□□□□□ -2.11
SPTLC3Q9NUV7 AL035398.1-201ENST00000430869 322 ntBASIC1.84□□□□□ -2.11
SPTLC3Q9NUV7 Y_RNA.690-201ENST00000516603 95 ntBASIC1.84□□□□□ -2.11
SPTLC3Q9NUV7 RNU6-113P-201ENST00000516653 101 ntBASIC1.84□□□□□ -2.11
SPTLC3Q9NUV7 RNU7-53P-201ENST00000516705 60 ntBASIC1.84□□□□□ -2.11
SPTLC3Q9NUV7 RNU2-60P-201ENST00000517290 128 ntBASIC1.84□□□□□ -2.11
SPTLC3Q9NUV7 MIR3910-1-201ENST00000580936 111 ntBASIC1.84□□□□□ -2.11
SPTLC3Q9NUV7 MIR4791-201ENST00000607666 84 ntBASIC1.84□□□□□ -2.11
SPTLC3Q9NUV7 MIR539-201ENST00000365690 78 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 Y_RNA.494-201ENST00000384432 111 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 RNU6-997P-201ENST00000384725 107 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 MIR764-201ENST00000390811 85 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 MTND4LP9-201ENST00000427694 174 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 RNU7-67P-201ENST00000459003 62 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 RNA5SP272-201ENST00000516095 111 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 RNA5SP458-201ENST00000516188 119 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 SNORD111.1-201ENST00000516421 86 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 RNU6-295P-201ENST00000516901 104 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 AC011603.4-201ENST00000611325 277 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 AC243994.1-201ENST00000618627 109 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 AC008133.2-201ENST00000624540 351 ntBASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.83□□□□□ -2.12
SPTLC3Q9NUV7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
SPTLC3Q9NUV7 SNORA51.10-201ENST00000384418 136 ntBASIC1.82□□□□□ -2.12
SPTLC3Q9NUV7 MIR320A-201ENST00000385302 82 ntBASIC1.82□□□□□ -2.12
SPTLC3Q9NUV7 RPL39P39-201ENST00000455840 151 ntBASIC1.82□□□□□ -2.12
SPTLC3Q9NUV7 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
SPTLC3Q9NUV7 Y_RNA.686-201ENST00000516548 134 ntBASIC1.82□□□□□ -2.12
SPTLC3Q9NUV7 AC019176.1-201ENST00000518519 225 ntBASIC1.82□□□□□ -2.12
SPTLC3Q9NUV7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SPTLC3Q9NUV7 MIR302B-201ENST00000362188 73 ntBASIC1.81□□□□□ -2.12
SPTLC3Q9NUV7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SPTLC3Q9NUV7 AC091932.4-201ENST00000623386 200 ntBASIC1.81□□□□□ -2.12
SPTLC3Q9NUV7 RNA5SP48-201ENST00000363969 126 ntBASIC1.8□□□□□ -2.12
SPTLC3Q9NUV7 RNA5SP99-201ENST00000364020 114 ntBASIC1.8□□□□□ -2.12
SPTLC3Q9NUV7 RNU6-81P-201ENST00000365608 104 ntBASIC1.8□□□□□ -2.12
SPTLC3Q9NUV7 SNORA40.18-201ENST00000391200 128 ntBASIC1.8□□□□□ -2.12
SPTLC3Q9NUV7 SNORA26.9-201ENST00000391322 122 ntBASIC1.8□□□□□ -2.12
SPTLC3Q9NUV7 RNU7-73P-201ENST00000458743 63 ntBASIC1.8□□□□□ -2.12
SPTLC3Q9NUV7 RNU6-958P-201ENST00000516995 106 ntBASIC1.8□□□□□ -2.12
SPTLC3Q9NUV7 MIR3121-201ENST00000579680 77 ntBASIC1.8□□□□□ -2.12
SPTLC3Q9NUV7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.8□□□□□ -2.12
SPTLC3Q9NUV7 AC132825.6-201ENST00000638861 357 ntBASIC1.8□□□□□ -2.12
SPTLC3Q9NUV7 RNU2-11P-201ENST00000459191 187 ntBASIC1.79□□□□□ -2.12
SPTLC3Q9NUV7 snoU13.16-201ENST00000459350 104 ntBASIC1.79□□□□□ -2.12
SPTLC3Q9NUV7 RNU6-406P-201ENST00000516470 107 ntBASIC1.79□□□□□ -2.12
SPTLC3Q9NUV7 MIR3664-201ENST00000579074 99 ntBASIC1.79□□□□□ -2.12
SPTLC3Q9NUV7 AL022345.2-201ENST00000606307 135 ntBASIC1.79□□□□□ -2.12
SPTLC3Q9NUV7 AC084768.2-201ENST00000622736 221 ntBASIC1.79□□□□□ -2.12
SPTLC3Q9NUV7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.79□□□□□ -2.12
SPTLC3Q9NUV7 AL596211.1-201ENST00000569873 2277 ntBASIC1.78□□□□□ -2.12
SPTLC3Q9NUV7 MIR342-201ENST00000362212 99 ntBASIC1.78□□□□□ -2.12
SPTLC3Q9NUV7 RNU6-309P-201ENST00000364573 106 ntBASIC1.78□□□□□ -2.12
SPTLC3Q9NUV7 MIR8081-201ENST00000611533 95 ntBASIC1.78□□□□□ -2.12
SPTLC3Q9NUV7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.78□□□□□ -2.12
SPTLC3Q9NUV7 MIR4251-201ENST00000635819 61 ntBASIC1.78□□□□□ -2.12
SPTLC3Q9NUV7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
SPTLC3Q9NUV7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SPTLC3Q9NUV7 RNY1P6-201ENST00000384193 109 ntBASIC1.77□□□□□ -2.13
SPTLC3Q9NUV7 MIR570-201ENST00000384917 97 ntBASIC1.77□□□□□ -2.13
SPTLC3Q9NUV7 RNA5SP261-201ENST00000410536 106 ntBASIC1.77□□□□□ -2.13
SPTLC3Q9NUV7 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
SPTLC3Q9NUV7 RNU6-902P-201ENST00000517212 91 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms