Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 Y_RNA.660-201ENST00000516002 120 ntBASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 RNA5SP481-201ENST00000516814 122 ntBASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 MIR5680-201ENST00000577577 84 ntBASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 MIR4506-201ENST00000584693 77 ntBASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
PRDM9Q9NQV7 MIRLET7A1-201ENST00000362295 80 ntBASIC3.05□□□□□ -1.92
PRDM9Q9NQV7 RNY1P2-201ENST00000364820 117 ntBASIC3.05□□□□□ -1.92
PRDM9Q9NQV7 RNA5SP465-201ENST00000391195 109 ntBASIC3.05□□□□□ -1.92
PRDM9Q9NQV7 AL450471.1-201ENST00000447509 127 ntBASIC3.05□□□□□ -1.92
PRDM9Q9NQV7 AC099513.1-201ENST00000490423 301 ntBASIC3.05□□□□□ -1.92
PRDM9Q9NQV7 RNU6-871P-201ENST00000516122 100 ntBASIC3.05□□□□□ -1.92
PRDM9Q9NQV7 RNA5SP137-201ENST00000516833 135 ntBASIC3.05□□□□□ -1.92
PRDM9Q9NQV7 MIR7112-201ENST00000616126 65 ntBASIC3.05□□□□□ -1.92
PRDM9Q9NQV7 AC092435.3-201ENST00000565538 3654 ntBASIC3.05□□□□□ -1.92
PRDM9Q9NQV7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 RNU4-32P-201ENST00000363404 141 ntBASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 SNORA38.1-201ENST00000364172 131 ntBASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 RNU6-686P-201ENST00000364839 107 ntBASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 RN7SKP123-201ENST00000410732 291 ntBASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 AC115115.1-201ENST00000449927 248 ntBASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 RNA5SP217-201ENST00000515959 91 ntBASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 SNORA64.4-201ENST00000516632 81 ntBASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 RNA5SP437-201ENST00000517249 129 ntBASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 MIR2682-201ENST00000580305 110 ntBASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 Y_RNA.788-201ENST00000622394 112 ntBASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 MIR622-201ENST00000638396 96 ntBASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PRDM9Q9NQV7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 AP000648.3-201ENST00000623539 4507 ntBASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 MIR424-201ENST00000362227 98 ntBASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 RNU6-411P-201ENST00000384451 107 ntBASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 MIR597-201ENST00000384968 97 ntBASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 RNU2-7P-201ENST00000410794 178 ntBASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 SNRPGP12-201ENST00000449481 213 ntBASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 BX510359.1-201ENST00000456973 237 ntBASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 snoU13.27-201ENST00000459278 104 ntBASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 FGF7P7-201ENST00000514120 227 ntBASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 RNU6-917P-201ENST00000516294 104 ntBASIC3.03□□□□□ -1.92
PRDM9Q9NQV7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 AL035425.3-201ENST00000564206 4996 ntBASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 MIR148B-201ENST00000362252 99 ntBASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 SNORA48.1-201ENST00000390879 135 ntBASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 RNU7-26P-201ENST00000458980 63 ntBASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 Y_RNA.648-201ENST00000459455 110 ntBASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 AC141846.1-201ENST00000568348 142 ntBASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 MIR3126-201ENST00000577443 74 ntBASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 MIR4764-201ENST00000580680 88 ntBASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRDM9Q9NQV7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 SNORA63.2-201ENST00000362603 126 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 SNORD56.3-201ENST00000363507 71 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 SNORA7.4-201ENST00000384249 137 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 MIR491-201ENST00000384877 84 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 RNU11-3P-201ENST00000391111 133 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 MIR1283-2-201ENST00000408621 87 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 RNU1-143P-201ENST00000516296 146 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 SNORA74D-201ENST00000516404 141 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 SNORA31.26-201ENST00000517250 137 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 MIR5004-201ENST00000579078 107 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 U1.23-201ENST00000610293 146 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 RNU1-68P-201ENST00000615382 146 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 U1.39-201ENST00000621562 146 ntBASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.01□□□□□ -1.93
PRDM9Q9NQV7 WWP1P1-201ENST00000466609 2769 ntBASIC3□□□□□ -1.93
PRDM9Q9NQV7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3□□□□□ -1.93
PRDM9Q9NQV7 SNORD38B-201ENST00000384690 67 ntBASIC3□□□□□ -1.93
PRDM9Q9NQV7 MIR627-201ENST00000384979 97 ntBASIC3□□□□□ -1.93
PRDM9Q9NQV7 RNA5SP237-201ENST00000410414 113 ntBASIC3□□□□□ -1.93
PRDM9Q9NQV7 AC104389.3-201ENST00000445629 235 ntBASIC3□□□□□ -1.93
PRDM9Q9NQV7 AC011753.1-201ENST00000451001 220 ntBASIC3□□□□□ -1.93
PRDM9Q9NQV7 RN7SL863P-201ENST00000462370 296 ntBASIC3□□□□□ -1.93
PRDM9Q9NQV7 SNORA70.24-201ENST00000517233 118 ntBASIC3□□□□□ -1.93
PRDM9Q9NQV7 SUB1P4-201ENST00000566062 339 ntBASIC3□□□□□ -1.93
PRDM9Q9NQV7 MIR4796-201ENST00000580742 81 ntBASIC3□□□□□ -1.93
PRDM9Q9NQV7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3□□□□□ -1.93
PRDM9Q9NQV7 AC022202.1-201ENST00000613515 211 ntBASIC3□□□□□ -1.93
PRDM9Q9NQV7 SNORD38B-202ENST00000625943 69 ntBASIC3□□□□□ -1.93
PRDM9Q9NQV7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3□□□□□ -1.93
PRDM9Q9NQV7 MIR3651-201ENST00000630427 90 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 212.3 ms