Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RNU4-88P-201ENST00000411220 86 ntBASIC-0.97□□□□□ -2.56
CHD8Q9HCK8 RNU6-938P-201ENST00000411285 103 ntBASIC-0.97□□□□□ -2.56
CHD8Q9HCK8 RNU7-96P-201ENST00000459535 64 ntBASIC-0.97□□□□□ -2.56
CHD8Q9HCK8 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.97□□□□□ -2.56
CHD8Q9HCK8 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.97□□□□□ -2.56
CHD8Q9HCK8 AL121655.1-201ENST00000605811 308 ntBASIC-0.97□□□□□ -2.56
CHD8Q9HCK8 SNORD75.2-201ENST00000408784 58 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 RPL22P17-201ENST00000438729 315 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 AC098614.3-201ENST00000438957 440 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 AC127459.3-201ENST00000624328 466 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 RNU6-757P-201ENST00000410334 100 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 MTATP6P20-201ENST00000414147 562 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 MTND2P30-201ENST00000456663 382 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 AC091179.3-201ENST00000474761 144 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 AL137161.1-201ENST00000532231 390 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 AC005972.2-201ENST00000604690 348 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 AC087752.4-201ENST00000605911 462 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 AC069503.3-201ENST00000618674 145 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.98□□□□□ -2.57
CHD8Q9HCK8 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 RNU6-792P-201ENST00000363490 107 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 SNORD12C-201ENST00000386307 89 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 MIR548H3-201ENST00000408771 118 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 RNU6-588P-201ENST00000410281 105 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 Z82188.1-201ENST00000436709 154 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 MTND4LP25-201ENST00000570218 163 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 MIR548H5-201ENST00000580314 60 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 AC016911.1-201ENST00000613297 452 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 RNY3P4-201ENST00000384428 101 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 MTND1P27-201ENST00000451117 902 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 RNU2-69P-201ENST00000516061 100 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 RNU7-149P-201ENST00000516739 59 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 FRG2DP-202ENST00000566967 323 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 MIR4748-201ENST00000578076 82 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 RN7SKP299-201ENST00000606679 301 ntBASIC-0.99□□□□□ -2.57
CHD8Q9HCK8 Y_RNA.221-201ENST00000364248 96 ntBASIC-1□□□□□ -2.57
CHD8Q9HCK8 SNORD115-23-201ENST00000364461 82 ntBASIC-1□□□□□ -2.57
CHD8Q9HCK8 USP9YP30-201ENST00000430729 455 ntBASIC-1□□□□□ -2.57
CHD8Q9HCK8 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1□□□□□ -2.57
CHD8Q9HCK8 GPR143P-201ENST00000434155 205 ntBASIC-1□□□□□ -2.57
CHD8Q9HCK8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1□□□□□ -2.57
CHD8Q9HCK8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1□□□□□ -2.57
CHD8Q9HCK8 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1□□□□□ -2.57
CHD8Q9HCK8 SNORD115-25-201ENST00000362619 82 ntBASIC-1□□□□□ -2.57
CHD8Q9HCK8 RNU4-24P-201ENST00000364565 139 ntBASIC-1□□□□□ -2.57
CHD8Q9HCK8 RNU4-20P-201ENST00000365601 151 ntBASIC-1□□□□□ -2.57
CHD8Q9HCK8 RNU6-291P-201ENST00000384720 107 ntBASIC-1□□□□□ -2.57
CHD8Q9HCK8 SNORA26.6-201ENST00000391256 115 ntBASIC-1□□□□□ -2.57
CHD8Q9HCK8 MIR342-201ENST00000362212 99 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 RNA5SP26-201ENST00000362406 119 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 RNU4-92P-201ENST00000363783 136 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 RNU6-949P-201ENST00000384040 107 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 RNU6-903P-201ENST00000391270 109 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 AC022616.6-201ENST00000520479 119 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 MIR548AE1-201ENST00000583292 70 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 AC007494.3-201ENST00000624660 743 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 U6.115-201ENST00000636045 103 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 MIR410-201ENST00000362222 80 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 U8.19-201ENST00000459095 133 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 U8.22-201ENST00000459141 133 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 SNORA40.9-201ENST00000515895 93 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 RNU6-966P-201ENST00000516479 104 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 SNORA40.17-201ENST00000517256 115 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 AC011603.4-201ENST00000611325 277 ntBASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.01□□□□□ -2.57
CHD8Q9HCK8 RNU6-883P-201ENST00000384597 107 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 MTND3P23-201ENST00000431980 347 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 AC108059.2-201ENST00000434626 151 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 MTCO2P16-201ENST00000436962 677 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 SNRPGP8-201ENST00000454064 226 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 RNU7-74P-201ENST00000459104 62 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 AC093783.1-201ENST00000612976 329 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 MIR6717-201ENST00000622747 73 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 AL163152.1-201ENST00000642001 374 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 RNU4-70P-201ENST00000384579 139 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 MTND4LP18-201ENST00000526864 291 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 AL080274.1-201ENST00000605565 220 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 RNU6-484P-201ENST00000384016 107 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 RNU6-154P-201ENST00000384306 106 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 SNORA25.10-201ENST00000515926 124 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 RNU7-188P-201ENST00000517063 64 ntBASIC-1.02□□□□□ -2.57
CHD8Q9HCK8 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms