Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 SNORD115-25-201ENST00000362619 82 ntBASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 SNORA17A-201ENST00000391185 133 ntBASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 HDGFP1-201ENST00000405943 252 ntBASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 RPS29P31-201ENST00000446147 164 ntBASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 RN7SL222P-201ENST00000476452 299 ntBASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 SNORA44.1-201ENST00000517031 108 ntBASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 SNORA17.5-201ENST00000630429 132 ntBASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP3-3Q9BYR6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 SNORA74A-201ENST00000364089 198 ntBASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 SNORD6-201ENST00000365444 73 ntBASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 MIR143-201ENST00000385300 106 ntBASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 RNA5SP270-201ENST00000411361 118 ntBASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 RNA5SP470-201ENST00000516463 106 ntBASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 AC022726.1-201ENST00000587475 207 ntBASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 AC008739.3-201ENST00000603262 127 ntBASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 AC087190.4-201ENST00000574616 8334 ntBASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP3-3Q9BYR6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 SNORA71.2-201ENST00000364941 134 ntBASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 SNORD1A-201ENST00000364968 72 ntBASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 MIR100-201ENST00000385259 80 ntBASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 RN7SL75P-201ENST00000461926 281 ntBASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 IGLV3-26-201ENST00000520756 302 ntBASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 uc_338.32-201ENST00000615087 172 ntBASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 MIR7154-201ENST00000620673 73 ntBASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-3Q9BYR6 LINC01355-201ENST00000566551 5444 ntBASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 MIR520F-201ENST00000384824 87 ntBASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 MIR708-201ENST00000390708 88 ntBASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 RNU1-82P-201ENST00000390851 165 ntBASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 MIR1286-201ENST00000408112 78 ntBASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 AC105129.1-201ENST00000560250 297 ntBASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 MIR6778-201ENST00000617912 73 ntBASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP3-3Q9BYR6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
KRTAP3-3Q9BYR6 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 MIR644A-201ENST00000385262 94 ntBASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 MIR1282-201ENST00000408865 101 ntBASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 AC140172.1-201ENST00000502928 141 ntBASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 RNU6-469P-201ENST00000516253 101 ntBASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 RNU1-6P-201ENST00000516290 144 ntBASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 AC023827.1-201ENST00000569247 97 ntBASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 XIST_intron.1-201ENST00000619444 68 ntBASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-3Q9BYR6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms