Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 SNRPGP13-201ENST00000442212 177 ntBASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 SNRPGP8-201ENST00000454064 226 ntBASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 AC245047.8-201ENST00000456455 284 ntBASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 MIR4421-201ENST00000578133 69 ntBASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 MIR548X2-201ENST00000579776 100 ntBASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 AL021707.8-201ENST00000609428 183 ntBASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-508P-201ENST00000363231 103 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-1082P-201ENST00000364574 107 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-1081P-201ENST00000384537 107 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-768P-201ENST00000384683 107 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-1154P-201ENST00000391001 104 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-460P-201ENST00000391158 108 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 NDUFA4P2-201ENST00000489989 244 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 RN7SKP164-201ENST00000516138 266 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 RNA5SP404-201ENST00000517118 132 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 MIR548AI-201ENST00000579940 88 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 AC027335.2-201ENST00000624030 375 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 MTND1P7-201ENST00000632801 297 ntBASIC1.39□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.127-201ENST00000363386 109 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 SNORA7.1-201ENST00000363750 139 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.353-201ENST00000365440 108 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-44P-201ENST00000384045 107 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 SNORA80D-201ENST00000384488 135 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 SNORA8.3-201ENST00000384679 139 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 AL606845.1-201ENST00000404881 255 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.797-201ENST00000515977 94 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 SNORA25.12-201ENST00000516202 82 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-659P-201ENST00000516454 104 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 RNU7-43P-201ENST00000516554 64 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 RNU2-60P-201ENST00000517290 128 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 DNAJC19P2-201ENST00000593340 302 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 AL359821.1-201ENST00000605519 182 ntBASIC1.38□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-978P-201ENST00000364371 103 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.280-201ENST00000364765 112 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.293-201ENST00000364908 93 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.294-201ENST00000364916 102 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.343-201ENST00000365354 112 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-484P-201ENST00000384016 107 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.420-201ENST00000384043 110 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-429P-201ENST00000384582 108 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-588P-201ENST00000410281 105 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 RNU4-43P-201ENST00000410628 137 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 SNORD123-201ENST00000459473 70 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 MIR4764-201ENST00000580680 88 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 MIR3192-201ENST00000584920 77 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 AC008507.4-201ENST00000585464 127 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 AL391903.3-201ENST00000612158 163 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.802-201ENST00000614892 130 ntBASIC1.37□□□□□ -2.19
HERPUD2Q9BSE4 MIR367-201ENST00000362299 68 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-103P-201ENST00000363686 107 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.357-201ENST00000365487 109 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.563-201ENST00000384707 108 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 SNORA40-201ENST00000388090 126 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 SNORD12-201ENST00000391002 90 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 RNU7-107P-201ENST00000459121 61 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 RNU4-57P-201ENST00000515980 135 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-1333P-201ENST00000516162 93 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-313P-201ENST00000516317 112 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 AC090821.2-201ENST00000523552 176 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 MIR5688-201ENST00000580619 83 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 AC091895.1-201ENST00000624494 256 ntBASIC1.36□□□□□ -2.19
HERPUD2Q9BSE4 SNORD45.3-201ENST00000363836 72 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 SNORD116-14-201ENST00000383894 92 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 SNORD116-17-201ENST00000383929 92 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-643P-201ENST00000384018 107 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 SNORA70.7-201ENST00000384159 133 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 SNORD116-15-201ENST00000384445 92 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 SNORD116-19-201ENST00000384729 92 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-1228P-201ENST00000391014 107 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-321P-201ENST00000410912 106 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.629-201ENST00000411368 105 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 AC006461.1-201ENST00000412637 326 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 AL591704.2-201ENST00000421658 181 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 SNORD79.1-201ENST00000516069 84 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-62P-201ENST00000516526 102 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 AC112693.2-201ENST00000556538 232 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 AP001340.1-201ENST00000624405 217 ntBASIC1.35□□□□□ -2.19
HERPUD2Q9BSE4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HERPUD2Q9BSE4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-1298P-201ENST00000362456 101 ntBASIC1.34□□□□□ -2.19
HERPUD2Q9BSE4 RNY1P10-201ENST00000363268 113 ntBASIC1.34□□□□□ -2.19
HERPUD2Q9BSE4 SNORA25.7-201ENST00000364375 127 ntBASIC1.34□□□□□ -2.19
HERPUD2Q9BSE4 SNORA40.5-201ENST00000391061 128 ntBASIC1.34□□□□□ -2.19
HERPUD2Q9BSE4 AC063976.4-201ENST00000421971 163 ntBASIC1.34□□□□□ -2.19
HERPUD2Q9BSE4 SNORD11-201ENST00000459124 84 ntBASIC1.34□□□□□ -2.19
HERPUD2Q9BSE4 AC107027.2-201ENST00000512197 115 ntBASIC1.34□□□□□ -2.19
HERPUD2Q9BSE4 Y_RNA.686-201ENST00000516548 134 ntBASIC1.34□□□□□ -2.19
HERPUD2Q9BSE4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms