Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 SCARNA20.6-201ENST00000517251 106 ntBASIC3.14□□□□□ -1.91
LAPTM4AQ15012 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.14□□□□□ -1.91
LAPTM4AQ15012 CYP3A52P-201ENST00000563326 91 ntBASIC3.14□□□□□ -1.91
LAPTM4AQ15012 SNORA28-201ENST00000606769 126 ntBASIC3.14□□□□□ -1.91
LAPTM4AQ15012 MIR92B-201ENST00000607575 96 ntBASIC3.14□□□□□ -1.91
LAPTM4AQ15012 MIR4773-1-201ENST00000637203 78 ntBASIC3.14□□□□□ -1.91
LAPTM4AQ15012 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LAPTM4AQ15012 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.13□□□□□ -1.91
LAPTM4AQ15012 RNU6-654P-201ENST00000364373 107 ntBASIC3.13□□□□□ -1.91
LAPTM4AQ15012 MIR452-201ENST00000385020 85 ntBASIC3.13□□□□□ -1.91
LAPTM4AQ15012 RNA5SP293-201ENST00000410527 113 ntBASIC3.13□□□□□ -1.91
LAPTM4AQ15012 RNU2-37P-201ENST00000410695 177 ntBASIC3.13□□□□□ -1.91
LAPTM4AQ15012 RNU1-143P-201ENST00000516296 146 ntBASIC3.13□□□□□ -1.91
LAPTM4AQ15012 RNA5SP147-201ENST00000516493 109 ntBASIC3.13□□□□□ -1.91
LAPTM4AQ15012 AC019176.1-201ENST00000518519 225 ntBASIC3.13□□□□□ -1.91
LAPTM4AQ15012 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.13□□□□□ -1.91
LAPTM4AQ15012 U1.23-201ENST00000610293 146 ntBASIC3.13□□□□□ -1.91
LAPTM4AQ15012 AL121772.2-201ENST00000614331 297 ntBASIC3.13□□□□□ -1.91
LAPTM4AQ15012 RNU1-68P-201ENST00000615382 146 ntBASIC3.13□□□□□ -1.91
LAPTM4AQ15012 AL662814.1-201ENST00000617364 121 ntBASIC3.13□□□□□ -1.91
LAPTM4AQ15012 U1.39-201ENST00000621562 146 ntBASIC3.13□□□□□ -1.91
LAPTM4AQ15012 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.13□□□□□ -1.91
LAPTM4AQ15012 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.13□□□□□ -1.91
LAPTM4AQ15012 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
LAPTM4AQ15012 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LAPTM4AQ15012 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
LAPTM4AQ15012 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
LAPTM4AQ15012 Y_RNA.239-201ENST00000364444 113 ntBASIC3.12□□□□□ -1.91
LAPTM4AQ15012 SNORA73.2-201ENST00000364946 201 ntBASIC3.12□□□□□ -1.91
LAPTM4AQ15012 RNU6-805P-201ENST00000365643 106 ntBASIC3.12□□□□□ -1.91
LAPTM4AQ15012 RNU6-949P-201ENST00000384040 107 ntBASIC3.12□□□□□ -1.91
LAPTM4AQ15012 MIR526A1-201ENST00000384897 85 ntBASIC3.12□□□□□ -1.91
LAPTM4AQ15012 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.12□□□□□ -1.91
LAPTM4AQ15012 RN7SL636P-201ENST00000497504 294 ntBASIC3.12□□□□□ -1.91
LAPTM4AQ15012 MIR3944-201ENST00000581277 108 ntBASIC3.12□□□□□ -1.91
LAPTM4AQ15012 AC006111.3-201ENST00000622137 383 ntBASIC3.12□□□□□ -1.91
LAPTM4AQ15012 IST1-227ENST00000626438 126 ntTSL 5 BASIC3.12□□□□□ -1.91
LAPTM4AQ15012 WWP1P1-201ENST00000466609 2769 ntBASIC3.12□□□□□ -1.91
LAPTM4AQ15012 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LAPTM4AQ15012 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
LAPTM4AQ15012 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAPTM4AQ15012 SNORA24B-201ENST00000384176 131 ntBASIC3.11□□□□□ -1.91
LAPTM4AQ15012 HMGN2P39-201ENST00000398005 273 ntBASIC3.11□□□□□ -1.91
LAPTM4AQ15012 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.11□□□□□ -1.91
LAPTM4AQ15012 RPS27P29-201ENST00000463110 252 ntBASIC3.11□□□□□ -1.91
LAPTM4AQ15012 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
LAPTM4AQ15012 RNA5SP445-201ENST00000515889 115 ntBASIC3.11□□□□□ -1.91
LAPTM4AQ15012 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.11□□□□□ -1.91
LAPTM4AQ15012 AC008739.3-201ENST00000603262 127 ntBASIC3.11□□□□□ -1.91
LAPTM4AQ15012 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.11□□□□□ -1.91
LAPTM4AQ15012 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.11□□□□□ -1.91
LAPTM4AQ15012 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAPTM4AQ15012 ZNF355P-201ENST00000427301 3216 ntBASIC3.11□□□□□ -1.91
LAPTM4AQ15012 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LAPTM4AQ15012 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
LAPTM4AQ15012 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
LAPTM4AQ15012 RNA5SP189-201ENST00000364920 115 ntBASIC3.1□□□□□ -1.91
LAPTM4AQ15012 RNU6-950P-201ENST00000384651 107 ntBASIC3.1□□□□□ -1.91
LAPTM4AQ15012 MIR592-201ENST00000384959 97 ntBASIC3.1□□□□□ -1.91
LAPTM4AQ15012 MIR767-201ENST00000390228 109 ntBASIC3.1□□□□□ -1.91
LAPTM4AQ15012 SNORD63B-201ENST00000411005 70 ntBASIC3.1□□□□□ -1.91
LAPTM4AQ15012 MTND4LP1-201ENST00000446263 157 ntBASIC3.1□□□□□ -1.91
LAPTM4AQ15012 SNORD105B-201ENST00000458770 79 ntBASIC3.1□□□□□ -1.91
LAPTM4AQ15012 RNU1-95P-201ENST00000516357 160 ntBASIC3.1□□□□□ -1.91
LAPTM4AQ15012 RNU1-128P-201ENST00000516704 160 ntBASIC3.1□□□□□ -1.91
LAPTM4AQ15012 RNU6-122P-201ENST00000516818 107 ntBASIC3.1□□□□□ -1.91
LAPTM4AQ15012 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.1□□□□□ -1.91
LAPTM4AQ15012 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.1□□□□□ -1.91
LAPTM4AQ15012 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAPTM4AQ15012 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.1□□□□□ -1.91
LAPTM4AQ15012 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LAPTM4AQ15012 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
LAPTM4AQ15012 SNORA31-201ENST00000362607 130 ntBASIC3.09□□□□□ -1.91
LAPTM4AQ15012 RNA5SP383-201ENST00000362934 120 ntBASIC3.09□□□□□ -1.91
LAPTM4AQ15012 SNORA16B-201ENST00000364674 135 ntBASIC3.09□□□□□ -1.91
LAPTM4AQ15012 AL359837.1-201ENST00000381357 287 ntBASIC3.09□□□□□ -1.91
LAPTM4AQ15012 RNA5SP299-201ENST00000391203 116 ntBASIC3.09□□□□□ -1.91
LAPTM4AQ15012 RPL23AP83-201ENST00000434984 473 ntBASIC3.09□□□□□ -1.91
LAPTM4AQ15012 AC104619.4-201ENST00000510773 249 ntBASIC3.09□□□□□ -1.91
LAPTM4AQ15012 SNORA31.21-201ENST00000517180 77 ntBASIC3.09□□□□□ -1.91
LAPTM4AQ15012 MIR548AO-201ENST00000579992 96 ntBASIC3.09□□□□□ -1.91
LAPTM4AQ15012 SNORA51-201ENST00000606420 132 ntBASIC3.09□□□□□ -1.91
LAPTM4AQ15012 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.09□□□□□ -1.91
LAPTM4AQ15012 AC002076.2-201ENST00000617362 122 ntBASIC3.09□□□□□ -1.91
LAPTM4AQ15012 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.09□□□□□ -1.91
LAPTM4AQ15012 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LAPTM4AQ15012 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAPTM4AQ15012 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAPTM4AQ15012 RNA5SP124-201ENST00000362739 110 ntBASIC3.08□□□□□ -1.92
LAPTM4AQ15012 RNU6-1328P-201ENST00000410938 106 ntBASIC3.08□□□□□ -1.92
LAPTM4AQ15012 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.08□□□□□ -1.92
LAPTM4AQ15012 AC115115.1-201ENST00000449927 248 ntBASIC3.08□□□□□ -1.92
LAPTM4AQ15012 AC025518.1-201ENST00000479856 347 ntBASIC3.08□□□□□ -1.92
LAPTM4AQ15012 RNU11-2P-201ENST00000516898 142 ntBASIC3.08□□□□□ -1.92
LAPTM4AQ15012 RNU6-667P-201ENST00000517186 102 ntBASIC3.08□□□□□ -1.92
LAPTM4AQ15012 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAPTM4AQ15012 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LAPTM4AQ15012 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.07□□□□□ -1.92
LAPTM4AQ15012 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.07□□□□□ -1.92
LAPTM4AQ15012 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms