Protein–RNA interactions for Protein: Q03395

ROM1, Rod outer segment membrane protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1Q03395 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ROM1Q03395 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
ROM1Q03395 RNA5SP289-201ENST00000362332 137 ntBASIC1.85□□□□□ -2.11
ROM1Q03395 RNU4-52P-201ENST00000384209 138 ntBASIC1.85□□□□□ -2.11
ROM1Q03395 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
ROM1Q03395 RNU7-73P-201ENST00000458743 63 ntBASIC1.85□□□□□ -2.11
ROM1Q03395 Y_RNA.649-201ENST00000459077 103 ntBASIC1.85□□□□□ -2.11
ROM1Q03395 RNU7-41P-201ENST00000515917 61 ntBASIC1.85□□□□□ -2.11
ROM1Q03395 SNORD111.1-201ENST00000516421 86 ntBASIC1.85□□□□□ -2.11
ROM1Q03395 MIR548A1-201ENST00000385041 97 ntBASIC1.84□□□□□ -2.11
ROM1Q03395 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
ROM1Q03395 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
ROM1Q03395 RNA5SP144-201ENST00000410846 116 ntBASIC1.84□□□□□ -2.11
ROM1Q03395 HMGN1P33-201ENST00000432945 451 ntBASIC1.84□□□□□ -2.11
ROM1Q03395 snoU13.9-201ENST00000458927 103 ntBASIC1.84□□□□□ -2.11
ROM1Q03395 RNA5SP233-201ENST00000459153 113 ntBASIC1.84□□□□□ -2.11
ROM1Q03395 COX6CP6-201ENST00000490840 228 ntBASIC1.84□□□□□ -2.11
ROM1Q03395 AC022523.2-201ENST00000561045 150 ntBASIC1.84□□□□□ -2.11
ROM1Q03395 MIR3683-201ENST00000580847 82 ntBASIC1.84□□□□□ -2.11
ROM1Q03395 AL513534.2-201ENST00000603836 250 ntBASIC1.84□□□□□ -2.11
ROM1Q03395 AL020996.3-201ENST00000606617 222 ntBASIC1.84□□□□□ -2.11
ROM1Q03395 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
ROM1Q03395 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ROM1Q03395 RNA5SP160-201ENST00000364866 120 ntBASIC1.83□□□□□ -2.12
ROM1Q03395 MIR30A-201ENST00000385092 71 ntBASIC1.83□□□□□ -2.12
ROM1Q03395 SNORA26.6-201ENST00000391256 115 ntBASIC1.83□□□□□ -2.12
ROM1Q03395 NDUFB4P4-201ENST00000404822 243 ntBASIC1.83□□□□□ -2.12
ROM1Q03395 RNA5SP338-201ENST00000410495 85 ntBASIC1.83□□□□□ -2.12
ROM1Q03395 HSPE1P24-201ENST00000450782 238 ntBASIC1.83□□□□□ -2.12
ROM1Q03395 AC019176.1-201ENST00000518519 225 ntBASIC1.83□□□□□ -2.12
ROM1Q03395 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ROM1Q03395 AC131280.1-202ENST00000624067 4211 ntBASIC1.83□□□□□ -2.12
ROM1Q03395 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ROM1Q03395 MIR302D-201ENST00000362275 68 ntBASIC1.82□□□□□ -2.12
ROM1Q03395 RNA5SP138-201ENST00000365098 114 ntBASIC1.82□□□□□ -2.12
ROM1Q03395 RNU6-1104P-201ENST00000384723 104 ntBASIC1.82□□□□□ -2.12
ROM1Q03395 RNU6-1319P-201ENST00000390855 104 ntBASIC1.82□□□□□ -2.12
ROM1Q03395 RNU6-747P-201ENST00000390928 104 ntBASIC1.82□□□□□ -2.12
ROM1Q03395 RNU6-241P-201ENST00000391148 104 ntBASIC1.82□□□□□ -2.12
ROM1Q03395 RNU6-177P-201ENST00000411257 104 ntBASIC1.82□□□□□ -2.12
ROM1Q03395 POLR2J4-204ENST00000418424 324 ntBASIC1.82□□□□□ -2.12
ROM1Q03395 snoU13.16-201ENST00000459350 104 ntBASIC1.82□□□□□ -2.12
ROM1Q03395 RNU6-919P-201ENST00000516731 104 ntBASIC1.82□□□□□ -2.12
ROM1Q03395 MIR4251-201ENST00000635819 61 ntBASIC1.82□□□□□ -2.12
ROM1Q03395 Y_RNA.35-201ENST00000362601 101 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 Y_RNA.198-201ENST00000364013 98 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 SNORA67.3-201ENST00000384366 140 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 SNORD116-21-201ENST00000384507 92 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 MT-TI-201ENST00000387365 69 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 RNU4-53P-201ENST00000410828 140 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 AL022718.1-201ENST00000412004 84 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 AL035461.1-201ENST00000421490 332 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 RNU6-250P-201ENST00000516958 103 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 SNORA44.1-201ENST00000517031 108 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 DNAJC19P9-201ENST00000555084 351 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 MIR6717-201ENST00000622747 73 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 WWP1P1-201ENST00000466609 2769 ntBASIC1.81□□□□□ -2.12
ROM1Q03395 SNORA22.1-201ENST00000362701 134 ntBASIC1.8□□□□□ -2.12
ROM1Q03395 Y_RNA.81-201ENST00000362997 102 ntBASIC1.8□□□□□ -2.12
ROM1Q03395 Y_RNA.171-201ENST00000363760 102 ntBASIC1.8□□□□□ -2.12
ROM1Q03395 SNORD1A-201ENST00000364968 72 ntBASIC1.8□□□□□ -2.12
ROM1Q03395 RNU6-44P-201ENST00000384045 107 ntBASIC1.8□□□□□ -2.12
ROM1Q03395 AL512326.2-201ENST00000426359 151 ntBASIC1.8□□□□□ -2.12
ROM1Q03395 AC079804.2-201ENST00000490376 200 ntBASIC1.8□□□□□ -2.12
ROM1Q03395 MIR3152-201ENST00000579801 74 ntBASIC1.8□□□□□ -2.12
ROM1Q03395 MIR548AO-201ENST00000579992 96 ntBASIC1.8□□□□□ -2.12
ROM1Q03395 MIR3192-201ENST00000584920 77 ntBASIC1.8□□□□□ -2.12
ROM1Q03395 AL096861.1-201ENST00000610899 123 ntBASIC1.8□□□□□ -2.12
ROM1Q03395 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.8□□□□□ -2.12
ROM1Q03395 Y_RNA.213-201ENST00000364178 111 ntBASIC1.79□□□□□ -2.12
ROM1Q03395 AL356320.1-201ENST00000429616 163 ntBASIC1.79□□□□□ -2.12
ROM1Q03395 RNU6-947P-201ENST00000516264 106 ntBASIC1.79□□□□□ -2.12
ROM1Q03395 RNU6-1258P-201ENST00000516911 111 ntBASIC1.79□□□□□ -2.12
ROM1Q03395 IGKV3-31-201ENST00000523109 329 ntBASIC1.79□□□□□ -2.12
ROM1Q03395 AC004812.1-201ENST00000540773 146 ntBASIC1.79□□□□□ -2.12
ROM1Q03395 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
ROM1Q03395 AL357312.1-201ENST00000603879 298 ntBASIC1.79□□□□□ -2.12
ROM1Q03395 GHRLOS.1-201ENST00000610995 70 ntBASIC1.79□□□□□ -2.12
ROM1Q03395 MIR6841-201ENST00000637129 72 ntBASIC1.79□□□□□ -2.12
ROM1Q03395 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.79□□□□□ -2.12
ROM1Q03395 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
ROM1Q03395 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
ROM1Q03395 AL359851.1-201ENST00000569460 4997 ntBASIC1.78□□□□□ -2.12
ROM1Q03395 SNORA1.1-201ENST00000364671 133 ntBASIC1.78□□□□□ -2.12
ROM1Q03395 RNA5SP261-201ENST00000410536 106 ntBASIC1.78□□□□□ -2.12
ROM1Q03395 HMGN2P38-201ENST00000423806 265 ntBASIC1.78□□□□□ -2.12
ROM1Q03395 AC079140.2-201ENST00000506193 142 ntBASIC1.78□□□□□ -2.12
ROM1Q03395 RNU6-589P-201ENST00000516485 107 ntBASIC1.78□□□□□ -2.12
ROM1Q03395 MIR3935-201ENST00000583472 104 ntBASIC1.78□□□□□ -2.12
ROM1Q03395 MIR8055-201ENST00000610739 97 ntBASIC1.78□□□□□ -2.12
ROM1Q03395 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
ROM1Q03395 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.78□□□□□ -2.12
ROM1Q03395 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
ROM1Q03395 RNU6-880P-201ENST00000384526 107 ntBASIC1.77□□□□□ -2.13
ROM1Q03395 RNY4P18-201ENST00000391107 89 ntBASIC1.77□□□□□ -2.13
ROM1Q03395 RNU2-40P-201ENST00000410833 196 ntBASIC1.77□□□□□ -2.13
ROM1Q03395 AC009474.2-201ENST00000451383 136 ntBASIC1.77□□□□□ -2.13
ROM1Q03395 RNU7-113P-201ENST00000459273 62 ntBASIC1.77□□□□□ -2.13
ROM1Q03395 Y_RNA.709-201ENST00000516952 92 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms