Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CD44P16070 RNU6-1260P-201ENST00000362944 107 ntBASIC3.82□□□□□ -1.8
CD44P16070 RNA5SP299-201ENST00000391203 116 ntBASIC3.82□□□□□ -1.8
CD44P16070 AC003685.2-201ENST00000422795 395 ntBASIC3.82□□□□□ -1.8
CD44P16070 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.82□□□□□ -1.8
CD44P16070 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.82□□□□□ -1.8
CD44P16070 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.82□□□□□ -1.8
CD44P16070 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CD44P16070 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CD44P16070 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
CD44P16070 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CD44P16070 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CD44P16070 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CD44P16070 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CD44P16070 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CD44P16070 U8.13-201ENST00000390842 128 ntBASIC3.81□□□□□ -1.8
CD44P16070 Y_RNA.809-201ENST00000516058 95 ntBASIC3.81□□□□□ -1.8
CD44P16070 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.81□□□□□ -1.8
CD44P16070 SUB1P4-201ENST00000566062 339 ntBASIC3.81□□□□□ -1.8
CD44P16070 AL161431.1-201ENST00000618966 4205 ntBASIC3.81□□□□□ -1.8
CD44P16070 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.81□□□□□ -1.8
CD44P16070 AC023934.1-201ENST00000574529 2389 ntBASIC3.81□□□□□ -1.8
CD44P16070 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.81□□□□□ -1.8
CD44P16070 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CD44P16070 SNORA68.1-201ENST00000364537 132 ntBASIC3.8□□□□□ -1.8
CD44P16070 RNU6-53P-201ENST00000365367 106 ntBASIC3.8□□□□□ -1.8
CD44P16070 Y_RNA.536-201ENST00000384621 113 ntBASIC3.8□□□□□ -1.8
CD44P16070 SNORD100-201ENST00000408573 76 ntBASIC3.8□□□□□ -1.8
CD44P16070 AL139132.1-201ENST00000431587 344 ntBASIC3.8□□□□□ -1.8
CD44P16070 RNU1-45P-201ENST00000517191 141 ntBASIC3.8□□□□□ -1.8
CD44P16070 MIR6740-201ENST00000618268 113 ntBASIC3.8□□□□□ -1.8
CD44P16070 uc_338.10-201ENST00000621872 182 ntBASIC3.8□□□□□ -1.8
CD44P16070 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CD44P16070 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CD44P16070 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CD44P16070 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD44P16070 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.79□□□□□ -1.8
CD44P16070 CYCSP4-201ENST00000429682 331 ntBASIC3.79□□□□□ -1.8
CD44P16070 AC009474.2-201ENST00000451383 136 ntBASIC3.79□□□□□ -1.8
CD44P16070 SNORA25.16-201ENST00000516741 121 ntBASIC3.79□□□□□ -1.8
CD44P16070 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.79□□□□□ -1.8
CD44P16070 RNU6-92P-201ENST00000605893 104 ntBASIC3.79□□□□□ -1.8
CD44P16070 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD44P16070 AC025518.1-201ENST00000479856 347 ntBASIC3.78□□□□□ -1.8
CD44P16070 AC099513.1-201ENST00000490423 301 ntBASIC3.78□□□□□ -1.8
CD44P16070 RNU1-95P-201ENST00000516357 160 ntBASIC3.78□□□□□ -1.8
CD44P16070 RNU1-128P-201ENST00000516704 160 ntBASIC3.78□□□□□ -1.8
CD44P16070 MIR548AD-201ENST00000584780 82 ntBASIC3.78□□□□□ -1.8
CD44P16070 AC073869.9-201ENST00000641610 120 ntBASIC3.78□□□□□ -1.8
CD44P16070 AL356274.2-201ENST00000624379 3752 ntBASIC3.78□□□□□ -1.8
CD44P16070 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CD44P16070 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.78□□□□□ -1.8
CD44P16070 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.78□□□□□ -1.8
CD44P16070 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.78□□□□□ -1.81
CD44P16070 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.78□□□□□ -1.81
CD44P16070 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.77□□□□□ -1.81
CD44P16070 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.77□□□□□ -1.81
CD44P16070 SNORD17-201ENST00000390930 237 ntBASIC3.77□□□□□ -1.81
CD44P16070 RN7SL442P-201ENST00000473804 320 ntBASIC3.77□□□□□ -1.81
CD44P16070 RNU7-41P-201ENST00000515917 61 ntBASIC3.77□□□□□ -1.81
CD44P16070 MIR4644-201ENST00000579929 84 ntBASIC3.77□□□□□ -1.81
CD44P16070 MIR4697-201ENST00000582977 78 ntBASIC3.77□□□□□ -1.81
CD44P16070 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.77□□□□□ -1.81
CD44P16070 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CD44P16070 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CD44P16070 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.76□□□□□ -1.81
CD44P16070 RNU1-58P-201ENST00000362413 163 ntBASIC3.76□□□□□ -1.81
CD44P16070 RNU1-70P-201ENST00000362618 164 ntBASIC3.76□□□□□ -1.81
CD44P16070 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CD44P16070 SNORD105B-201ENST00000458770 79 ntBASIC3.76□□□□□ -1.81
CD44P16070 AL162274.2-201ENST00000614406 332 ntBASIC3.76□□□□□ -1.81
CD44P16070 uc_338.32-201ENST00000615087 172 ntBASIC3.76□□□□□ -1.81
CD44P16070 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CD44P16070 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CD44P16070 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CD44P16070 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CD44P16070 SNORD60.1-201ENST00000362451 73 ntBASIC3.75□□□□□ -1.81
CD44P16070 SNORA5A-201ENST00000384111 134 ntBASIC3.75□□□□□ -1.81
CD44P16070 SNORA75.1-201ENST00000391130 148 ntBASIC3.75□□□□□ -1.81
CD44P16070 MIR1193-201ENST00000408109 78 ntBASIC3.75□□□□□ -1.81
CD44P16070 RNU6-1165P-201ENST00000410119 107 ntBASIC3.75□□□□□ -1.81
CD44P16070 SCARNA20.6-201ENST00000517251 106 ntBASIC3.75□□□□□ -1.81
CD44P16070 IGKV2-26-201ENST00000518305 343 ntBASIC3.75□□□□□ -1.81
CD44P16070 MIR4491-201ENST00000581087 68 ntBASIC3.75□□□□□ -1.81
CD44P16070 PRELID3BP2-201ENST00000605362 201 ntBASIC3.75□□□□□ -1.81
CD44P16070 AC009093.8-201ENST00000641769 292 ntBASIC3.75□□□□□ -1.81
CD44P16070 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.75□□□□□ -1.81
CD44P16070 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CD44P16070 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
CD44P16070 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.74□□□□□ -1.81
CD44P16070 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CD44P16070 RNU4-35P-201ENST00000362588 141 ntBASIC3.74□□□□□ -1.81
CD44P16070 RNU6-35P-201ENST00000384530 107 ntBASIC3.74□□□□□ -1.81
CD44P16070 RNU6-220P-201ENST00000390919 107 ntBASIC3.74□□□□□ -1.81
CD44P16070 GTF3AP2-201ENST00000557014 266 ntBASIC3.74□□□□□ -1.81
CD44P16070 MIR4709-201ENST00000577272 72 ntBASIC3.74□□□□□ -1.81
CD44P16070 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC3.74□□□□□ -1.81
CD44P16070 MIR3922-201ENST00000585192 84 ntBASIC3.74□□□□□ -1.81
CD44P16070 RNU7-10P-201ENST00000607194 63 ntBASIC3.74□□□□□ -1.81
CD44P16070 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms