Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.37□□□□□ -1.71
MYCNP04198 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MYCNP04198 RNY4P3-201ENST00000365254 95 ntBASIC4.37□□□□□ -1.71
MYCNP04198 SNORA67.4-201ENST00000384688 142 ntBASIC4.37□□□□□ -1.71
MYCNP04198 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC4.37□□□□□ -1.71
MYCNP04198 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.37□□□□□ -1.71
MYCNP04198 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MYCNP04198 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
MYCNP04198 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
MYCNP04198 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
MYCNP04198 RNU1-15P-201ENST00000353977 144 ntBASIC4.36□□□□□ -1.71
MYCNP04198 RNU6-340P-201ENST00000364005 107 ntBASIC4.36□□□□□ -1.71
MYCNP04198 Y_RNA.207-201ENST00000364142 106 ntBASIC4.36□□□□□ -1.71
MYCNP04198 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
MYCNP04198 SNORD63B-201ENST00000411005 70 ntBASIC4.36□□□□□ -1.71
MYCNP04198 AC105272.1-201ENST00000438604 198 ntBASIC4.36□□□□□ -1.71
MYCNP04198 AL591424.2-201ENST00000617023 128 ntBASIC4.36□□□□□ -1.71
MYCNP04198 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MYCNP04198 RNU6-681P-201ENST00000364012 104 ntBASIC4.35□□□□□ -1.71
MYCNP04198 RNU6-53P-201ENST00000365367 106 ntBASIC4.35□□□□□ -1.71
MYCNP04198 Y_RNA.443-201ENST00000384135 111 ntBASIC4.35□□□□□ -1.71
MYCNP04198 MIR627-201ENST00000384979 97 ntBASIC4.35□□□□□ -1.71
MYCNP04198 MIR1251-201ENST00000408552 70 ntBASIC4.35□□□□□ -1.71
MYCNP04198 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.35□□□□□ -1.71
MYCNP04198 PRELID3BP2-201ENST00000605362 201 ntBASIC4.35□□□□□ -1.71
MYCNP04198 MIR6740-201ENST00000618268 113 ntBASIC4.35□□□□□ -1.71
MYCNP04198 MIR7702-201ENST00000621931 59 ntBASIC4.35□□□□□ -1.71
MYCNP04198 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC4.35□□□□□ -1.71
MYCNP04198 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
MYCNP04198 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MYCNP04198 MAPK10-362ENST00000641864 4484 ntBASIC4.34□□□□□ -1.71
MYCNP04198 RNU6-1123P-201ENST00000362347 106 ntBASIC4.34□□□□□ -1.71
MYCNP04198 RNA5SP501-201ENST00000410990 112 ntBASIC4.34□□□□□ -1.71
MYCNP04198 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.34□□□□□ -1.71
MYCNP04198 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.34□□□□□ -1.71
MYCNP04198 AC092628.1-201ENST00000436250 252 ntBASIC4.34□□□□□ -1.71
MYCNP04198 AC083863.1-201ENST00000438811 231 ntBASIC4.34□□□□□ -1.71
MYCNP04198 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.34□□□□□ -1.72
MYCNP04198 MIR518A2-201ENST00000384966 87 ntBASIC4.33□□□□□ -1.72
MYCNP04198 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
MYCNP04198 SNORD111.1-201ENST00000516421 86 ntBASIC4.33□□□□□ -1.72
MYCNP04198 DEFB122-202ENST00000569013 197 ntBASIC4.33□□□□□ -1.72
MYCNP04198 MIR3675-201ENST00000583661 73 ntBASIC4.33□□□□□ -1.72
MYCNP04198 MIR486-1-201ENST00000612171 68 ntBASIC4.33□□□□□ -1.72
MYCNP04198 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.33□□□□□ -1.72
MYCNP04198 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MYCNP04198 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.33□□□□□ -1.72
MYCNP04198 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MYCNP04198 MIR30D-201ENST00000362283 70 ntBASIC4.32□□□□□ -1.72
MYCNP04198 RNU6-531P-201ENST00000516694 104 ntBASIC4.32□□□□□ -1.72
MYCNP04198 NDUFB9P3-201ENST00000521269 501 ntBASIC4.32□□□□□ -1.72
MYCNP04198 MIR7975-201ENST00000619350 68 ntBASIC4.32□□□□□ -1.72
MYCNP04198 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
MYCNP04198 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
MYCNP04198 ZNF209P-201ENST00000593450 2304 ntBASIC4.32□□□□□ -1.72
MYCNP04198 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
MYCNP04198 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
MYCNP04198 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
MYCNP04198 Y_RNA.239-201ENST00000364444 113 ntBASIC4.31□□□□□ -1.72
MYCNP04198 MIR634-201ENST00000385208 97 ntBASIC4.31□□□□□ -1.72
MYCNP04198 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
MYCNP04198 RNU6-1165P-201ENST00000410119 107 ntBASIC4.31□□□□□ -1.72
MYCNP04198 RNU6-1194P-201ENST00000516208 104 ntBASIC4.31□□□□□ -1.72
MYCNP04198 U4.3-201ENST00000621047 82 ntBASIC4.31□□□□□ -1.72
MYCNP04198 VPS35-212ENST00000640313 141 ntTSL 5 BASIC4.31□□□□□ -1.72
MYCNP04198 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
MYCNP04198 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MYCNP04198 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
MYCNP04198 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
MYCNP04198 RNU4-58P-201ENST00000363192 141 ntBASIC4.3□□□□□ -1.72
MYCNP04198 SNORD45A-201ENST00000384512 84 ntBASIC4.3□□□□□ -1.72
MYCNP04198 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
MYCNP04198 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MYCNP04198 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
MYCNP04198 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MYCNP04198 RNA5SP50-201ENST00000363731 107 ntBASIC4.29□□□□□ -1.72
MYCNP04198 HMGN2P35-201ENST00000412164 270 ntBASIC4.29□□□□□ -1.72
MYCNP04198 SNORA31.15-201ENST00000516771 132 ntBASIC4.29□□□□□ -1.72
MYCNP04198 RNU6-881P-201ENST00000516813 102 ntBASIC4.29□□□□□ -1.72
MYCNP04198 AC006023.1-201ENST00000603944 259 ntBASIC4.29□□□□□ -1.72
MYCNP04198 MIR8053-201ENST00000613344 75 ntBASIC4.29□□□□□ -1.72
MYCNP04198 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MYCNP04198 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MYCNP04198 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.28□□□□□ -1.72
MYCNP04198 MIR337-201ENST00000362281 93 ntBASIC4.28□□□□□ -1.72
MYCNP04198 RNU6-396P-201ENST00000365369 105 ntBASIC4.28□□□□□ -1.72
MYCNP04198 MIR490-201ENST00000384865 128 ntBASIC4.28□□□□□ -1.72
MYCNP04198 AC092427.1-202ENST00000430569 476 ntBASIC4.28□□□□□ -1.72
MYCNP04198 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.28□□□□□ -1.72
MYCNP04198 MIR4264-201ENST00000583520 66 ntBASIC4.28□□□□□ -1.72
MYCNP04198 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
MYCNP04198 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.28□□□□□ -1.72
MYCNP04198 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
MYCNP04198 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MYCNP04198 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
MYCNP04198 RPS27P16-201ENST00000425758 201 ntBASIC4.27□□□□□ -1.73
MYCNP04198 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.27□□□□□ -1.73
MYCNP04198 MIR5187-201ENST00000583479 76 ntBASIC4.27□□□□□ -1.73
MYCNP04198 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.27□□□□□ -1.73
MYCNP04198 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 256.2 ms