Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
GFRA3O60609 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GFRA3O60609 RNU6-862P-201ENST00000362804 105 ntBASIC3.21□□□□□ -1.9
GFRA3O60609 RNU1-23P-201ENST00000363361 144 ntBASIC3.21□□□□□ -1.9
GFRA3O60609 RNU6-957P-201ENST00000363652 99 ntBASIC3.21□□□□□ -1.9
GFRA3O60609 RNU6-482P-201ENST00000391068 107 ntBASIC3.21□□□□□ -1.9
GFRA3O60609 AL139132.1-201ENST00000431587 344 ntBASIC3.21□□□□□ -1.9
GFRA3O60609 TRBV12-2-201ENST00000489763 344 ntBASIC3.21□□□□□ -1.9
GFRA3O60609 SNORA74.3-201ENST00000517108 154 ntBASIC3.21□□□□□ -1.9
GFRA3O60609 AC141846.1-201ENST00000568348 142 ntBASIC3.21□□□□□ -1.9
GFRA3O60609 U4.3-201ENST00000621047 82 ntBASIC3.21□□□□□ -1.9
GFRA3O60609 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
GFRA3O60609 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
GFRA3O60609 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GFRA3O60609 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFRA3O60609 SNORA31-201ENST00000362607 130 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 U8.2-201ENST00000363156 134 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 MIR136-201ENST00000385207 82 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.2□□□□□ -1.9
GFRA3O60609 SNORD123-201ENST00000459473 70 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 RN7SL594P-201ENST00000470590 287 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 AC108210.2-201ENST00000503681 201 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 SNORA31.10-201ENST00000516482 106 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 RNU6-548P-201ENST00000517083 115 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 DEFB122-202ENST00000569013 197 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 UBL5P2-201ENST00000583788 219 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 SNORA28-201ENST00000606769 126 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 U6.81-201ENST00000612550 106 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 AC106800.4-201ENST00000614905 153 ntBASIC3.2□□□□□ -1.9
GFRA3O60609 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.2□□□□□ -1.9
GFRA3O60609 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
GFRA3O60609 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
GFRA3O60609 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
GFRA3O60609 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
GFRA3O60609 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GFRA3O60609 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
GFRA3O60609 RNA5SP189-201ENST00000364920 115 ntBASIC3.19□□□□□ -1.9
GFRA3O60609 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.19□□□□□ -1.9
GFRA3O60609 RNU6-542P-201ENST00000516405 103 ntBASIC3.19□□□□□ -1.9
GFRA3O60609 AC015712.3-201ENST00000559380 164 ntBASIC3.19□□□□□ -1.9
GFRA3O60609 MIR3140-201ENST00000583685 90 ntBASIC3.19□□□□□ -1.9
GFRA3O60609 AL096861.1-201ENST00000610899 123 ntBASIC3.19□□□□□ -1.9
GFRA3O60609 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GFRA3O60609 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GFRA3O60609 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GFRA3O60609 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
GFRA3O60609 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.18□□□□□ -1.9
GFRA3O60609 Y_RNA.379-201ENST00000365653 102 ntBASIC3.18□□□□□ -1.9
GFRA3O60609 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
GFRA3O60609 RNU7-106P-201ENST00000459514 67 ntBASIC3.18□□□□□ -1.9
GFRA3O60609 RN7SL93P-201ENST00000463035 293 ntBASIC3.18□□□□□ -1.9
GFRA3O60609 RNU1-61P-201ENST00000516107 151 ntBASIC3.18□□□□□ -1.9
GFRA3O60609 RNA5SP24-201ENST00000516478 95 ntBASIC3.18□□□□□ -1.9
GFRA3O60609 RNA5SP168-201ENST00000516642 112 ntBASIC3.18□□□□□ -1.9
GFRA3O60609 RNU2-19P-201ENST00000517288 84 ntBASIC3.18□□□□□ -1.9
GFRA3O60609 DLEU2_4.2-201ENST00000616613 58 ntBASIC3.18□□□□□ -1.9
GFRA3O60609 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.18□□□□□ -1.9
GFRA3O60609 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
GFRA3O60609 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GFRA3O60609 AP006437.1-201ENST00000641440 3685 ntBASIC3.18□□□□□ -1.9
GFRA3O60609 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
GFRA3O60609 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
GFRA3O60609 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.18□□□□□ -1.9
GFRA3O60609 AF117829.1-206ENST00000621883 3802 ntBASIC3.17□□□□□ -1.9
GFRA3O60609 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.17□□□□□ -1.9
GFRA3O60609 RNU6-824P-201ENST00000363724 104 ntBASIC3.17□□□□□ -1.9
GFRA3O60609 Y_RNA.375-201ENST00000365625 101 ntBASIC3.17□□□□□ -1.9
GFRA3O60609 MIR452-201ENST00000385020 85 ntBASIC3.17□□□□□ -1.9
GFRA3O60609 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.17□□□□□ -1.9
GFRA3O60609 AP000873.1-201ENST00000463987 400 ntBASIC3.17□□□□□ -1.9
GFRA3O60609 RNU6-982P-201ENST00000516216 102 ntBASIC3.17□□□□□ -1.9
GFRA3O60609 MIR2114-201ENST00000516645 80 ntBASIC3.17□□□□□ -1.9
GFRA3O60609 SNORA31.21-201ENST00000517180 77 ntBASIC3.17□□□□□ -1.9
GFRA3O60609 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.17□□□□□ -1.9
GFRA3O60609 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
GFRA3O60609 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GFRA3O60609 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
GFRA3O60609 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
GFRA3O60609 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GFRA3O60609 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
GFRA3O60609 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
GFRA3O60609 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.16□□□□□ -1.9
GFRA3O60609 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.16□□□□□ -1.9
GFRA3O60609 SNORA7.4-201ENST00000384249 137 ntBASIC3.16□□□□□ -1.9
GFRA3O60609 MIR196B-201ENST00000384852 84 ntBASIC3.16□□□□□ -1.9
GFRA3O60609 AC245517.4-201ENST00000448601 281 ntBASIC3.16□□□□□ -1.9
GFRA3O60609 AC097510.1-201ENST00000510945 133 ntBASIC3.16□□□□□ -1.9
GFRA3O60609 SCARNA17.1-201ENST00000516211 143 ntBASIC3.16□□□□□ -1.9
GFRA3O60609 SCARNA17.2-201ENST00000516334 143 ntBASIC3.16□□□□□ -1.9
GFRA3O60609 MIR5089-201ENST00000580047 84 ntBASIC3.16□□□□□ -1.9
GFRA3O60609 MIR3938-201ENST00000582157 103 ntBASIC3.16□□□□□ -1.9
GFRA3O60609 SCARNA17.4-201ENST00000614296 143 ntBASIC3.16□□□□□ -1.9
GFRA3O60609 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GFRA3O60609 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GFRA3O60609 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.15□□□□□ -1.9
GFRA3O60609 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
GFRA3O60609 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
GFRA3O60609 RNU6-753P-201ENST00000363926 107 ntBASIC3.15□□□□□ -1.91
GFRA3O60609 RNU6-1083P-201ENST00000384022 107 ntBASIC3.15□□□□□ -1.91
GFRA3O60609 RNU6-949P-201ENST00000384040 107 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms