Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU6-1006P-201ENST00000516998 103 ntBASIC3.19□□□□□ -1.9
HOXA2O43364 RNA5SP380-201ENST00000517190 98 ntBASIC3.19□□□□□ -1.9
HOXA2O43364 SCARNA20.6-201ENST00000517251 106 ntBASIC3.19□□□□□ -1.9
HOXA2O43364 RNU6-86P-201ENST00000606534 107 ntBASIC3.19□□□□□ -1.9
HOXA2O43364 MAPK10-266ENST00000641066 6555 ntBASIC3.18□□□□□ -1.9
HOXA2O43364 RNU6-342P-201ENST00000384521 104 ntBASIC3.18□□□□□ -1.9
HOXA2O43364 SNORA48.1-201ENST00000390879 135 ntBASIC3.18□□□□□ -1.9
HOXA2O43364 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.18□□□□□ -1.9
HOXA2O43364 RPL23AP6-201ENST00000446637 472 ntBASIC3.18□□□□□ -1.9
HOXA2O43364 snoU13.27-201ENST00000459278 104 ntBASIC3.18□□□□□ -1.9
HOXA2O43364 RNA5SP437-201ENST00000517249 129 ntBASIC3.18□□□□□ -1.9
HOXA2O43364 MIR4658-201ENST00000584344 65 ntBASIC3.18□□□□□ -1.9
HOXA2O43364 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA2O43364 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA2O43364 AC108206.1-201ENST00000570186 4159 ntBASIC3.18□□□□□ -1.9
HOXA2O43364 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA2O43364 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA2O43364 AL161431.1-201ENST00000618966 4205 ntBASIC3.17□□□□□ -1.9
HOXA2O43364 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA2O43364 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
HOXA2O43364 Y_RNA.4-201ENST00000362333 112 ntBASIC3.17□□□□□ -1.9
HOXA2O43364 RNU6-865P-201ENST00000364772 107 ntBASIC3.17□□□□□ -1.9
HOXA2O43364 RNU6-24P-201ENST00000384440 107 ntBASIC3.17□□□□□ -1.9
HOXA2O43364 RN7SL20P-201ENST00000488827 297 ntBASIC3.17□□□□□ -1.9
HOXA2O43364 RNU7-35P-201ENST00000517174 62 ntBASIC3.17□□□□□ -1.9
HOXA2O43364 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA2O43364 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA2O43364 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXA2O43364 RNU6-509P-201ENST00000363519 107 ntBASIC3.16□□□□□ -1.9
HOXA2O43364 RNU6-1163P-201ENST00000364516 107 ntBASIC3.16□□□□□ -1.9
HOXA2O43364 AC087499.2-201ENST00000432861 149 ntBASIC3.16□□□□□ -1.9
HOXA2O43364 RNU6-826P-201ENST00000516827 104 ntBASIC3.16□□□□□ -1.9
HOXA2O43364 AC019288.1-201ENST00000557918 224 ntBASIC3.16□□□□□ -1.9
HOXA2O43364 MIR4319-201ENST00000577285 85 ntBASIC3.16□□□□□ -1.9
HOXA2O43364 FAM106DP-201ENST00000586416 501 ntBASIC3.16□□□□□ -1.9
HOXA2O43364 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXA2O43364 AC006160.2-201ENST00000637708 154 ntBASIC3.16□□□□□ -1.9
HOXA2O43364 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.15□□□□□ -1.9
HOXA2O43364 RNA5SP383-201ENST00000362934 120 ntBASIC3.15□□□□□ -1.91
HOXA2O43364 MIR184-201ENST00000384962 84 ntBASIC3.15□□□□□ -1.91
HOXA2O43364 MIR518A2-201ENST00000384966 87 ntBASIC3.15□□□□□ -1.91
HOXA2O43364 RNU1-143P-201ENST00000516296 146 ntBASIC3.15□□□□□ -1.91
HOXA2O43364 U1.23-201ENST00000610293 146 ntBASIC3.15□□□□□ -1.91
HOXA2O43364 MIR8055-201ENST00000610739 97 ntBASIC3.15□□□□□ -1.91
HOXA2O43364 RNU1-68P-201ENST00000615382 146 ntBASIC3.15□□□□□ -1.91
HOXA2O43364 AC007318.2-201ENST00000620999 243 ntBASIC3.15□□□□□ -1.91
HOXA2O43364 U1.39-201ENST00000621562 146 ntBASIC3.15□□□□□ -1.91
HOXA2O43364 MIR548BB-201ENST00000626714 66 ntBASIC3.15□□□□□ -1.91
HOXA2O43364 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXA2O43364 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXA2O43364 MIR34C-201ENST00000384831 77 ntBASIC3.14□□□□□ -1.91
HOXA2O43364 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HOXA2O43364 SNORA74.3-201ENST00000517108 154 ntBASIC3.14□□□□□ -1.91
HOXA2O43364 AC104027.1-201ENST00000521887 300 ntBASIC3.14□□□□□ -1.91
HOXA2O43364 SUB1P4-201ENST00000566062 339 ntBASIC3.14□□□□□ -1.91
HOXA2O43364 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXA2O43364 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA2O43364 AC062016.1-201ENST00000355719 319 ntBASIC3.13□□□□□ -1.91
HOXA2O43364 RNU6-112P-201ENST00000363599 104 ntBASIC3.13□□□□□ -1.91
HOXA2O43364 Y_RNA.191-201ENST00000363972 113 ntBASIC3.13□□□□□ -1.91
HOXA2O43364 Y_RNA.448-201ENST00000384185 108 ntBASIC3.13□□□□□ -1.91
HOXA2O43364 Y_RNA.607-201ENST00000410597 98 ntBASIC3.13□□□□□ -1.91
HOXA2O43364 Y_RNA.609-201ENST00000410669 89 ntBASIC3.13□□□□□ -1.91
HOXA2O43364 SUMO1P4-201ENST00000429430 302 ntBASIC3.13□□□□□ -1.91
HOXA2O43364 AC099513.1-201ENST00000490423 301 ntBASIC3.13□□□□□ -1.91
HOXA2O43364 RNU7-43P-201ENST00000516554 64 ntBASIC3.13□□□□□ -1.91
HOXA2O43364 SNORA64.4-201ENST00000516632 81 ntBASIC3.13□□□□□ -1.91
HOXA2O43364 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXA2O43364 MIR8065-201ENST00000620577 100 ntBASIC3.13□□□□□ -1.91
HOXA2O43364 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXA2O43364 MIR424-201ENST00000362227 98 ntBASIC3.12□□□□□ -1.91
HOXA2O43364 RNU6-633P-201ENST00000362612 103 ntBASIC3.12□□□□□ -1.91
HOXA2O43364 RNU6-1244P-201ENST00000363614 108 ntBASIC3.12□□□□□ -1.91
HOXA2O43364 RNU6-1307P-201ENST00000391012 103 ntBASIC3.12□□□□□ -1.91
HOXA2O43364 MIR548G-201ENST00000408442 89 ntBASIC3.12□□□□□ -1.91
HOXA2O43364 RNU6-1086P-201ENST00000410930 100 ntBASIC3.12□□□□□ -1.91
HOXA2O43364 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXA2O43364 RN7SL442P-201ENST00000473804 320 ntBASIC3.12□□□□□ -1.91
HOXA2O43364 RN7SKP132-201ENST00000516001 208 ntBASIC3.12□□□□□ -1.91
HOXA2O43364 SNORD67.1-201ENST00000516618 108 ntBASIC3.12□□□□□ -1.91
HOXA2O43364 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXA2O43364 SEPT14P17-201ENST00000617978 177 ntBASIC3.12□□□□□ -1.91
HOXA2O43364 Z97988.1-201ENST00000637697 135 ntBASIC3.12□□□□□ -1.91
HOXA2O43364 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXA2O43364 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA2O43364 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXA2O43364 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA2O43364 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA2O43364 MIR449A-201ENST00000362113 91 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 SNORD38.2-201ENST00000384470 69 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RNU6-296P-201ENST00000384608 107 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 Y_RNA.567-201ENST00000384736 106 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 AL023284.1-201ENST00000403956 276 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RNU6-447P-201ENST00000410293 104 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RNU6-1118P-201ENST00000410382 104 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RNU6-1076P-201ENST00000410397 104 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RNU6-355P-201ENST00000410427 104 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RNU6-791P-201ENST00000410467 104 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RNU6-705P-201ENST00000410601 104 ntBASIC3.11□□□□□ -1.91
HOXA2O43364 RNU6-1100P-201ENST00000410691 104 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms