Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 RPS12P2-201ENST00000439728 269 ntBASIC3.24□□□□□ -1.89
SPTLC1O15269 UBL5P1-201ENST00000507979 193 ntBASIC3.24□□□□□ -1.89
SPTLC1O15269 RNA5SP217-201ENST00000515959 91 ntBASIC3.24□□□□□ -1.89
SPTLC1O15269 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.24□□□□□ -1.89
SPTLC1O15269 SCARNA16.3-201ENST00000516595 184 ntBASIC3.24□□□□□ -1.89
SPTLC1O15269 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
SPTLC1O15269 MIR4791-201ENST00000607666 84 ntBASIC3.24□□□□□ -1.89
SPTLC1O15269 AC243994.1-201ENST00000618627 109 ntBASIC3.24□□□□□ -1.89
SPTLC1O15269 AL513423.1-201ENST00000621695 132 ntBASIC3.24□□□□□ -1.89
SPTLC1O15269 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.24□□□□□ -1.89
SPTLC1O15269 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SPTLC1O15269 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SPTLC1O15269 Y_RNA.94-201ENST00000363068 106 ntBASIC3.23□□□□□ -1.89
SPTLC1O15269 SNORD56.5-201ENST00000364281 72 ntBASIC3.23□□□□□ -1.89
SPTLC1O15269 Y_RNA.316-201ENST00000365118 111 ntBASIC3.23□□□□□ -1.89
SPTLC1O15269 SNORA48.1-201ENST00000390879 135 ntBASIC3.23□□□□□ -1.89
SPTLC1O15269 MIR1283-2-201ENST00000408621 87 ntBASIC3.23□□□□□ -1.89
SPTLC1O15269 Y_RNA.607-201ENST00000410597 98 ntBASIC3.23□□□□□ -1.89
SPTLC1O15269 RNU6-237P-201ENST00000515985 71 ntBASIC3.23□□□□□ -1.89
SPTLC1O15269 MIR6717-201ENST00000622747 73 ntBASIC3.23□□□□□ -1.89
SPTLC1O15269 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SPTLC1O15269 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SPTLC1O15269 RNU6-633P-201ENST00000362612 103 ntBASIC3.22□□□□□ -1.89
SPTLC1O15269 RNU6-788P-201ENST00000390967 104 ntBASIC3.22□□□□□ -1.89
SPTLC1O15269 RNU6-1190P-201ENST00000410811 104 ntBASIC3.22□□□□□ -1.89
SPTLC1O15269 RPL32P35-201ENST00000415214 394 ntBASIC3.22□□□□□ -1.89
SPTLC1O15269 RNU7-73P-201ENST00000458743 63 ntBASIC3.22□□□□□ -1.89
SPTLC1O15269 SNORD123-201ENST00000459473 70 ntBASIC3.22□□□□□ -1.89
SPTLC1O15269 SNORD3E-202ENST00000627253 216 ntBASIC3.22□□□□□ -1.89
SPTLC1O15269 MIR6841-201ENST00000637129 72 ntBASIC3.22□□□□□ -1.89
SPTLC1O15269 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.22□□□□□ -1.89
SPTLC1O15269 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SPTLC1O15269 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SPTLC1O15269 RNU4-82P-201ENST00000362443 140 ntBASIC3.21□□□□□ -1.9
SPTLC1O15269 RNU6-1163P-201ENST00000364516 107 ntBASIC3.21□□□□□ -1.9
SPTLC1O15269 SNORA24-201ENST00000384096 131 ntBASIC3.21□□□□□ -1.9
SPTLC1O15269 MIR660-201ENST00000385235 97 ntBASIC3.21□□□□□ -1.9
SPTLC1O15269 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SPTLC1O15269 RNA5SP184-201ENST00000411071 108 ntBASIC3.21□□□□□ -1.9
SPTLC1O15269 AL139132.1-201ENST00000431587 344 ntBASIC3.21□□□□□ -1.9
SPTLC1O15269 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.21□□□□□ -1.9
SPTLC1O15269 MIR548AR-201ENST00000582191 57 ntBASIC3.21□□□□□ -1.9
SPTLC1O15269 AC021506.2-201ENST00000612354 169 ntBASIC3.21□□□□□ -1.9
SPTLC1O15269 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SPTLC1O15269 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.21□□□□□ -1.9
SPTLC1O15269 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.21□□□□□ -1.9
SPTLC1O15269 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SPTLC1O15269 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SPTLC1O15269 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SPTLC1O15269 RNA5SP383-201ENST00000362934 120 ntBASIC3.2□□□□□ -1.9
SPTLC1O15269 SNORA26.6-201ENST00000391256 115 ntBASIC3.2□□□□□ -1.9
SPTLC1O15269 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.2□□□□□ -1.9
SPTLC1O15269 snoU13.27-201ENST00000459278 104 ntBASIC3.2□□□□□ -1.9
SPTLC1O15269 SUB1P4-201ENST00000566062 339 ntBASIC3.2□□□□□ -1.9
SPTLC1O15269 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SPTLC1O15269 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SPTLC1O15269 EEF1A1P41-201ENST00000414667 207 ntBASIC3.19□□□□□ -1.9
SPTLC1O15269 RNA5SP437-201ENST00000517249 129 ntBASIC3.19□□□□□ -1.9
SPTLC1O15269 AC245166.1-201ENST00000521012 253 ntBASIC3.19□□□□□ -1.9
SPTLC1O15269 AL020996.3-201ENST00000606617 222 ntBASIC3.19□□□□□ -1.9
SPTLC1O15269 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SPTLC1O15269 Y_RNA.140-201ENST00000363474 103 ntBASIC3.18□□□□□ -1.9
SPTLC1O15269 SNORD115-27-201ENST00000364430 82 ntBASIC3.18□□□□□ -1.9
SPTLC1O15269 HMGN2P39-201ENST00000398005 273 ntBASIC3.18□□□□□ -1.9
SPTLC1O15269 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.18□□□□□ -1.9
SPTLC1O15269 RNU6-1006P-201ENST00000516998 103 ntBASIC3.18□□□□□ -1.9
SPTLC1O15269 SNORA31.26-201ENST00000517250 137 ntBASIC3.18□□□□□ -1.9
SPTLC1O15269 MIR4319-201ENST00000577285 85 ntBASIC3.18□□□□□ -1.9
SPTLC1O15269 SEPT14P17-201ENST00000617978 177 ntBASIC3.18□□□□□ -1.9
SPTLC1O15269 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SPTLC1O15269 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.18□□□□□ -1.9
SPTLC1O15269 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.17□□□□□ -1.9
SPTLC1O15269 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPTLC1O15269 RNU6-112P-201ENST00000363599 104 ntBASIC3.17□□□□□ -1.9
SPTLC1O15269 RNU1-51P-201ENST00000365345 176 ntBASIC3.17□□□□□ -1.9
SPTLC1O15269 Y_RNA.537-201ENST00000384626 109 ntBASIC3.17□□□□□ -1.9
SPTLC1O15269 SNORD28B-201ENST00000390993 75 ntBASIC3.17□□□□□ -1.9
SPTLC1O15269 RNU6-1307P-201ENST00000391012 103 ntBASIC3.17□□□□□ -1.9
SPTLC1O15269 RNA5SP501-201ENST00000410990 112 ntBASIC3.17□□□□□ -1.9
SPTLC1O15269 AC105272.1-201ENST00000438604 198 ntBASIC3.17□□□□□ -1.9
SPTLC1O15269 RNU7-2P-201ENST00000516096 62 ntBASIC3.17□□□□□ -1.9
SPTLC1O15269 RNU6-826P-201ENST00000516827 104 ntBASIC3.17□□□□□ -1.9
SPTLC1O15269 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
SPTLC1O15269 U1.36-201ENST00000620684 176 ntBASIC3.17□□□□□ -1.9
SPTLC1O15269 U8.9-201ENST00000365667 134 ntBASIC3.16□□□□□ -1.9
SPTLC1O15269 RNU6-913P-201ENST00000390913 95 ntBASIC3.16□□□□□ -1.9
SPTLC1O15269 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.16□□□□□ -1.9
SPTLC1O15269 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
SPTLC1O15269 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.15□□□□□ -1.9
SPTLC1O15269 RNU6-524P-201ENST00000384270 107 ntBASIC3.15□□□□□ -1.91
SPTLC1O15269 MIR526A1-201ENST00000384897 85 ntBASIC3.15□□□□□ -1.91
SPTLC1O15269 RNA5SP508-201ENST00000411327 119 ntBASIC3.15□□□□□ -1.91
SPTLC1O15269 FAM106DP-201ENST00000586416 501 ntBASIC3.15□□□□□ -1.91
SPTLC1O15269 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SPTLC1O15269 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SPTLC1O15269 AC062016.1-201ENST00000355719 319 ntBASIC3.14□□□□□ -1.91
SPTLC1O15269 SNORD38.1-201ENST00000363863 68 ntBASIC3.14□□□□□ -1.91
SPTLC1O15269 RNU6-296P-201ENST00000384608 107 ntBASIC3.14□□□□□ -1.91
SPTLC1O15269 Y_RNA.565-201ENST00000384719 101 ntBASIC3.14□□□□□ -1.91
SPTLC1O15269 RNA5SP344-201ENST00000411081 104 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms