Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SCARNA17.4-201ENST00000614296 143 ntBASIC3.09□□□□□ -1.91
H3BM21 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
H3BM21 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.09□□□□□ -1.92
H3BM21 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
H3BM21 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
H3BM21 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
H3BM21 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
H3BM21 Y_RNA.264-201ENST00000364665 102 ntBASIC3.08□□□□□ -1.92
H3BM21 RNU6-811P-201ENST00000384069 107 ntBASIC3.08□□□□□ -1.92
H3BM21 RNU6-205P-201ENST00000390858 107 ntBASIC3.08□□□□□ -1.92
H3BM21 RNA5SP292-201ENST00000390974 118 ntBASIC3.08□□□□□ -1.92
H3BM21 AC244636.1-201ENST00000421152 228 ntBASIC3.08□□□□□ -1.92
H3BM21 CST2P1-201ENST00000425770 87 ntBASIC3.08□□□□□ -1.92
H3BM21 AC104332.2-201ENST00000429959 156 ntBASIC3.08□□□□□ -1.92
H3BM21 HMGN1P33-201ENST00000432945 451 ntBASIC3.08□□□□□ -1.92
H3BM21 RPS29P12-201ENST00000460178 152 ntBASIC3.08□□□□□ -1.92
H3BM21 AC008885.1-201ENST00000514930 301 ntBASIC3.08□□□□□ -1.92
H3BM21 MIR7106-201ENST00000612419 65 ntBASIC3.08□□□□□ -1.92
H3BM21 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.08□□□□□ -1.92
H3BM21 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
H3BM21 AL355596.1-201ENST00000565399 3996 ntBASIC3.08□□□□□ -1.92
H3BM21 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
H3BM21 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.08□□□□□ -1.92
H3BM21 AL035425.3-201ENST00000564206 4996 ntBASIC3.07□□□□□ -1.92
H3BM21 SNORA44-201ENST00000384584 132 ntBASIC3.07□□□□□ -1.92
H3BM21 RN7SKP123-201ENST00000410732 291 ntBASIC3.07□□□□□ -1.92
H3BM21 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.07□□□□□ -1.92
H3BM21 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.07□□□□□ -1.92
H3BM21 RN7SL429P-201ENST00000479090 223 ntBASIC3.07□□□□□ -1.92
H3BM21 RN7SL489P-201ENST00000486185 223 ntBASIC3.07□□□□□ -1.92
H3BM21 RN7SL327P-201ENST00000488659 223 ntBASIC3.07□□□□□ -1.92
H3BM21 RN7SL636P-201ENST00000497504 294 ntBASIC3.07□□□□□ -1.92
H3BM21 RNU1-143P-201ENST00000516296 146 ntBASIC3.07□□□□□ -1.92
H3BM21 U1.23-201ENST00000610293 146 ntBASIC3.07□□□□□ -1.92
H3BM21 RNU1-68P-201ENST00000615382 146 ntBASIC3.07□□□□□ -1.92
H3BM21 RN7SL853P-201ENST00000617250 223 ntBASIC3.07□□□□□ -1.92
H3BM21 U1.39-201ENST00000621562 146 ntBASIC3.07□□□□□ -1.92
H3BM21 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.07□□□□□ -1.92
H3BM21 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.06□□□□□ -1.92
H3BM21 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
H3BM21 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
H3BM21 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.06□□□□□ -1.92
H3BM21 HSBP1P2-201ENST00000299671 229 ntBASIC3.06□□□□□ -1.92
H3BM21 RNU6-208P-201ENST00000362431 107 ntBASIC3.06□□□□□ -1.92
H3BM21 RNU2-48P-201ENST00000410694 191 ntBASIC3.06□□□□□ -1.92
H3BM21 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.06□□□□□ -1.92
H3BM21 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.06□□□□□ -1.92
H3BM21 AC243994.1-201ENST00000618627 109 ntBASIC3.06□□□□□ -1.92
H3BM21 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
H3BM21 RNA5SP109-201ENST00000391010 116 ntBASIC3.05□□□□□ -1.92
H3BM21 Y_RNA.648-201ENST00000459455 110 ntBASIC3.05□□□□□ -1.92
H3BM21 SNORA18.5-201ENST00000516616 101 ntBASIC3.05□□□□□ -1.92
H3BM21 AL137790.1-201ENST00000634283 177 ntBASIC3.05□□□□□ -1.92
H3BM21 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.05□□□□□ -1.92
H3BM21 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.05□□□□□ -1.92
H3BM21 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
H3BM21 AC007336.1-201ENST00000576365 3828 ntBASIC3.05□□□□□ -1.92
H3BM21 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
H3BM21 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
H3BM21 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.04□□□□□ -1.92
H3BM21 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
H3BM21 RNU6-862P-201ENST00000362804 105 ntBASIC3.04□□□□□ -1.92
H3BM21 SNORA80A-201ENST00000363922 136 ntBASIC3.04□□□□□ -1.92
H3BM21 SNORA8.1-201ENST00000384250 140 ntBASIC3.04□□□□□ -1.92
H3BM21 MIR516B2-201ENST00000385190 85 ntBASIC3.04□□□□□ -1.92
H3BM21 RNU6-630P-201ENST00000391258 106 ntBASIC3.04□□□□□ -1.92
H3BM21 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
H3BM21 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.04□□□□□ -1.92
H3BM21 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
H3BM21 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.03□□□□□ -1.92
H3BM21 AP000648.3-201ENST00000623539 4507 ntBASIC3.03□□□□□ -1.92
H3BM21 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
H3BM21 MIR22-201ENST00000362190 85 ntBASIC3.03□□□□□ -1.92
H3BM21 SNORD114-6-201ENST00000364393 72 ntBASIC3.03□□□□□ -1.92
H3BM21 RN7SKP220-201ENST00000410611 288 ntBASIC3.03□□□□□ -1.92
H3BM21 RNU4-83P-201ENST00000410863 133 ntBASIC3.03□□□□□ -1.92
H3BM21 RNU6-56P-201ENST00000516986 93 ntBASIC3.03□□□□□ -1.92
H3BM21 AC245166.1-201ENST00000521012 253 ntBASIC3.03□□□□□ -1.92
H3BM21 SNORA28-201ENST00000606769 126 ntBASIC3.03□□□□□ -1.92
H3BM21 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.03□□□□□ -1.92
H3BM21 MIR8065-201ENST00000620577 100 ntBASIC3.03□□□□□ -1.92
H3BM21 AC092435.3-201ENST00000565538 3654 ntBASIC3.03□□□□□ -1.92
H3BM21 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
H3BM21 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
H3BM21 RNU6-833P-201ENST00000363486 107 ntBASIC3.02□□□□□ -1.93
H3BM21 MIR633-201ENST00000384821 98 ntBASIC3.02□□□□□ -1.93
H3BM21 MIR218-1-201ENST00000384999 110 ntBASIC3.02□□□□□ -1.93
H3BM21 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
H3BM21 SNORD67-201ENST00000390833 111 ntBASIC3.02□□□□□ -1.93
H3BM21 FO393413.1-201ENST00000402892 195 ntBASIC3.02□□□□□ -1.93
H3BM21 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.02□□□□□ -1.93
H3BM21 AC015818.7-201ENST00000428754 109 ntBASIC3.02□□□□□ -1.93
H3BM21 AC079150.2-201ENST00000443733 78 ntBASIC3.02□□□□□ -1.93
H3BM21 RPS29P11-201ENST00000496507 171 ntBASIC3.02□□□□□ -1.93
H3BM21 CKS1BP2-201ENST00000497342 240 ntBASIC3.02□□□□□ -1.93
H3BM21 AC107016.2-201ENST00000547968 190 ntBASIC3.02□□□□□ -1.93
H3BM21 AC067747.1-201ENST00000608026 250 ntBASIC3.02□□□□□ -1.93
H3BM21 MIR5739-201ENST00000619803 80 ntBASIC3.02□□□□□ -1.93
H3BM21 MIR8054-201ENST00000620877 86 ntBASIC3.02□□□□□ -1.93
H3BM21 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms