Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXD4L1Q9NU39 ATP5A1P2-201ENST00000412323 255 ntBASIC4.37□□□□□ -1.71
FOXD4L1Q9NU39 RNU6-303P-201ENST00000517091 106 ntBASIC4.37□□□□□ -1.71
FOXD4L1Q9NU39 MIR6716-201ENST00000613413 80 ntBASIC4.37□□□□□ -1.71
FOXD4L1Q9NU39 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
FOXD4L1Q9NU39 MAPK10-373ENST00000641983 6772 ntBASIC4.37□□□□□ -1.71
FOXD4L1Q9NU39 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXD4L1Q9NU39 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
FOXD4L1Q9NU39 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FOXD4L1Q9NU39 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXD4L1Q9NU39 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXD4L1Q9NU39 RNU5F-1-201ENST00000362507 117 ntBASIC4.36□□□□□ -1.71
FOXD4L1Q9NU39 MIR653-201ENST00000385279 96 ntBASIC4.36□□□□□ -1.71
FOXD4L1Q9NU39 AL138878.1-201ENST00000405131 347 ntBASIC4.36□□□□□ -1.71
FOXD4L1Q9NU39 SNORA57.3-201ENST00000411095 141 ntBASIC4.36□□□□□ -1.71
FOXD4L1Q9NU39 AC121758.2-201ENST00000553271 193 ntBASIC4.36□□□□□ -1.71
FOXD4L1Q9NU39 AL365361.1-201ENST00000566942 3481 ntBASIC4.36□□□□□ -1.71
FOXD4L1Q9NU39 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 MIR372-201ENST00000362225 67 ntBASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 RNU6-132P-201ENST00000383863 107 ntBASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 MIR184-201ENST00000384962 84 ntBASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 MIR563-201ENST00000385080 79 ntBASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 RNA5SP424-201ENST00000390988 115 ntBASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 RNU6-587P-201ENST00000391282 106 ntBASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 RNU2-59P-201ENST00000410482 191 ntBASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 AC245517.4-201ENST00000448601 281 ntBASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 AC003982.1-202ENST00000469928 248 ntBASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 PRELID3BP2-201ENST00000605362 201 ntBASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 ZYXP1-201ENST00000617638 118 ntBASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FOXD4L1Q9NU39 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 SNORA48.8-201ENST00000391324 134 ntBASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 MIR1265-201ENST00000408444 86 ntBASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 RNA5SP100-201ENST00000410903 110 ntBASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 RNA5SP59-201ENST00000410922 110 ntBASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 UBBP3-201ENST00000445497 241 ntBASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 RNU6-75P-201ENST00000515944 104 ntBASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 SNORA31.17-201ENST00000516953 127 ntBASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 5S_rRNA.3-201ENST00000517021 110 ntBASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 5S_rRNA.19-201ENST00000612131 110 ntBASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 5S_rRNA.18-201ENST00000621941 110 ntBASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD4L1Q9NU39 RNU6-396P-201ENST00000365369 105 ntBASIC4.33□□□□□ -1.72
FOXD4L1Q9NU39 AC007224.1-201ENST00000564410 144 ntBASIC4.33□□□□□ -1.72
FOXD4L1Q9NU39 AC067747.1-201ENST00000608026 250 ntBASIC4.33□□□□□ -1.72
FOXD4L1Q9NU39 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXD4L1Q9NU39 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD4L1Q9NU39 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD4L1Q9NU39 RNA5SP42-201ENST00000364278 115 ntBASIC4.32□□□□□ -1.72
FOXD4L1Q9NU39 MIR520H-201ENST00000385126 88 ntBASIC4.32□□□□□ -1.72
FOXD4L1Q9NU39 SNORD30.1-201ENST00000391309 70 ntBASIC4.32□□□□□ -1.72
FOXD4L1Q9NU39 SNORA59A-201ENST00000459326 152 ntBASIC4.32□□□□□ -1.72
FOXD4L1Q9NU39 VTRNA2-2P-201ENST00000516091 103 ntBASIC4.32□□□□□ -1.72
FOXD4L1Q9NU39 RNVU1-4-201ENST00000612985 164 ntBASIC4.32□□□□□ -1.72
FOXD4L1Q9NU39 U7.8-201ENST00000619968 63 ntBASIC4.32□□□□□ -1.72
FOXD4L1Q9NU39 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXD4L1Q9NU39 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
FOXD4L1Q9NU39 RNU6-203P-201ENST00000384038 104 ntBASIC4.31□□□□□ -1.72
FOXD4L1Q9NU39 SNORA70C-201ENST00000384538 135 ntBASIC4.31□□□□□ -1.72
FOXD4L1Q9NU39 SNORA11-201ENST00000408789 128 ntBASIC4.31□□□□□ -1.72
FOXD4L1Q9NU39 RNU6-628P-201ENST00000410675 107 ntBASIC4.31□□□□□ -1.72
FOXD4L1Q9NU39 RNA5SP270-201ENST00000411361 118 ntBASIC4.31□□□□□ -1.72
FOXD4L1Q9NU39 AL159169.1-201ENST00000421119 127 ntBASIC4.31□□□□□ -1.72
FOXD4L1Q9NU39 RN7SL323P-201ENST00000494712 295 ntBASIC4.31□□□□□ -1.72
FOXD4L1Q9NU39 AC104027.1-201ENST00000521887 300 ntBASIC4.31□□□□□ -1.72
FOXD4L1Q9NU39 MIR4264-201ENST00000583520 66 ntBASIC4.31□□□□□ -1.72
FOXD4L1Q9NU39 UBL5P2-201ENST00000583788 219 ntBASIC4.31□□□□□ -1.72
FOXD4L1Q9NU39 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
FOXD4L1Q9NU39 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXD4L1Q9NU39 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXD4L1Q9NU39 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXD4L1Q9NU39 Y_RNA.596-201ENST00000410462 109 ntBASIC4.3□□□□□ -1.72
FOXD4L1Q9NU39 AC004965.1-201ENST00000413033 213 ntBASIC4.3□□□□□ -1.72
FOXD4L1Q9NU39 MIR6740-201ENST00000618268 113 ntBASIC4.3□□□□□ -1.72
FOXD4L1Q9NU39 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXD4L1Q9NU39 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXD4L1Q9NU39 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXD4L1Q9NU39 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXD4L1Q9NU39 MIR30E-201ENST00000362104 92 ntBASIC4.29□□□□□ -1.72
FOXD4L1Q9NU39 RNU6-53P-201ENST00000365367 106 ntBASIC4.29□□□□□ -1.72
FOXD4L1Q9NU39 MIR30B-201ENST00000384850 88 ntBASIC4.29□□□□□ -1.72
FOXD4L1Q9NU39 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FOXD4L1Q9NU39 RNU6-1165P-201ENST00000410119 107 ntBASIC4.29□□□□□ -1.72
FOXD4L1Q9NU39 RNA5SP344-201ENST00000411081 104 ntBASIC4.29□□□□□ -1.72
FOXD4L1Q9NU39 AL139132.1-201ENST00000431587 344 ntBASIC4.29□□□□□ -1.72
FOXD4L1Q9NU39 MIR2116-201ENST00000517221 80 ntBASIC4.29□□□□□ -1.72
FOXD4L1Q9NU39 AC022149.2-201ENST00000621061 203 ntBASIC4.29□□□□□ -1.72
FOXD4L1Q9NU39 MIRLET7F1-201ENST00000362202 87 ntBASIC4.28□□□□□ -1.72
FOXD4L1Q9NU39 RNA5SP283-201ENST00000365604 119 ntBASIC4.28□□□□□ -1.72
FOXD4L1Q9NU39 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.28□□□□□ -1.72
FOXD4L1Q9NU39 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
FOXD4L1Q9NU39 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXD4L1Q9NU39 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXD4L1Q9NU39 SPRR2C-201ENST00000290702 219 ntBASIC4.27□□□□□ -1.73
FOXD4L1Q9NU39 MIR30D-201ENST00000362283 70 ntBASIC4.27□□□□□ -1.73
FOXD4L1Q9NU39 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms