Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6-126P-201ENST00000516685 103 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 RNU6-250P-201ENST00000516958 103 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.86□□□□□ -2.11
EBF3Q9H4W6 MIR4679-1-201ENST00000637619 75 ntBASIC1.86□□□□□ -2.11
EBF3Q9H4W6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
EBF3Q9H4W6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
EBF3Q9H4W6 AC008555.8-201ENST00000623602 2168 ntBASIC1.85□□□□□ -2.11
EBF3Q9H4W6 FTH1P12-201ENST00000432137 551 ntBASIC1.85□□□□□ -2.11
EBF3Q9H4W6 SNRPGP14-201ENST00000435400 219 ntBASIC1.85□□□□□ -2.11
EBF3Q9H4W6 RNU7-94P-201ENST00000459576 63 ntBASIC1.85□□□□□ -2.11
EBF3Q9H4W6 RNU6-168P-201ENST00000516189 101 ntBASIC1.85□□□□□ -2.11
EBF3Q9H4W6 AL358944.1-201ENST00000528537 144 ntBASIC1.85□□□□□ -2.11
EBF3Q9H4W6 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
EBF3Q9H4W6 AC022217.4-201ENST00000604389 163 ntBASIC1.85□□□□□ -2.11
EBF3Q9H4W6 AL627230.6-201ENST00000611129 280 ntBASIC1.85□□□□□ -2.11
EBF3Q9H4W6 uc_338.28-201ENST00000612082 187 ntBASIC1.85□□□□□ -2.11
EBF3Q9H4W6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
EBF3Q9H4W6 MIR450A1-201ENST00000362262 91 ntBASIC1.84□□□□□ -2.11
EBF3Q9H4W6 Y_RNA.4-201ENST00000362333 112 ntBASIC1.84□□□□□ -2.11
EBF3Q9H4W6 Y_RNA.366-201ENST00000365540 102 ntBASIC1.84□□□□□ -2.11
EBF3Q9H4W6 RNU6-880P-201ENST00000384526 107 ntBASIC1.84□□□□□ -2.11
EBF3Q9H4W6 SNORA8-201ENST00000384574 139 ntBASIC1.84□□□□□ -2.11
EBF3Q9H4W6 RNA5SP323-201ENST00000391094 133 ntBASIC1.84□□□□□ -2.11
EBF3Q9H4W6 SNRPGP13-201ENST00000442212 177 ntBASIC1.84□□□□□ -2.11
EBF3Q9H4W6 MIR4498-201ENST00000577599 66 ntBASIC1.84□□□□□ -2.11
EBF3Q9H4W6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.84□□□□□ -2.11
EBF3Q9H4W6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
EBF3Q9H4W6 Y_RNA.346-201ENST00000365385 112 ntBASIC1.83□□□□□ -2.12
EBF3Q9H4W6 Y_RNA.549-201ENST00000384657 102 ntBASIC1.83□□□□□ -2.12
EBF3Q9H4W6 RNU11-3P-201ENST00000391111 133 ntBASIC1.83□□□□□ -2.12
EBF3Q9H4W6 AL049830.1-201ENST00000468034 425 ntBASIC1.83□□□□□ -2.12
EBF3Q9H4W6 MIR5197-201ENST00000583721 112 ntBASIC1.83□□□□□ -2.12
EBF3Q9H4W6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
EBF3Q9H4W6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
EBF3Q9H4W6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
EBF3Q9H4W6 MIR378A-201ENST00000362177 66 ntBASIC1.82□□□□□ -2.12
EBF3Q9H4W6 Y_RNA.116-201ENST00000363292 103 ntBASIC1.82□□□□□ -2.12
EBF3Q9H4W6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.82□□□□□ -2.12
EBF3Q9H4W6 RNU6-106P-201ENST00000384405 107 ntBASIC1.82□□□□□ -2.12
EBF3Q9H4W6 Y_RNA.528-201ENST00000384575 108 ntBASIC1.82□□□□□ -2.12
EBF3Q9H4W6 RNU6-938P-201ENST00000411285 103 ntBASIC1.82□□□□□ -2.12
EBF3Q9H4W6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.82□□□□□ -2.12
EBF3Q9H4W6 MTATP6P21-201ENST00000440681 189 ntBASIC1.82□□□□□ -2.12
EBF3Q9H4W6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.82□□□□□ -2.12
EBF3Q9H4W6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.82□□□□□ -2.12
EBF3Q9H4W6 RNU7-25P-201ENST00000516544 62 ntBASIC1.82□□□□□ -2.12
EBF3Q9H4W6 AP002004.2-201ENST00000531656 154 ntBASIC1.82□□□□□ -2.12
EBF3Q9H4W6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.82□□□□□ -2.12
EBF3Q9H4W6 MIR4762-201ENST00000585261 75 ntBASIC1.82□□□□□ -2.12
EBF3Q9H4W6 AC069114.2-201ENST00000604699 304 ntBASIC1.82□□□□□ -2.12
EBF3Q9H4W6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
EBF3Q9H4W6 RNU6-661P-201ENST00000362409 107 ntBASIC1.81□□□□□ -2.12
EBF3Q9H4W6 SNORD68-201ENST00000363214 84 ntBASIC1.81□□□□□ -2.12
EBF3Q9H4W6 RNU6-268P-201ENST00000364174 107 ntBASIC1.81□□□□□ -2.12
EBF3Q9H4W6 SNORA16.1-201ENST00000364597 132 ntBASIC1.81□□□□□ -2.12
EBF3Q9H4W6 MIR597-201ENST00000384968 97 ntBASIC1.81□□□□□ -2.12
EBF3Q9H4W6 MT-TI-201ENST00000387365 69 ntBASIC1.81□□□□□ -2.12
EBF3Q9H4W6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
EBF3Q9H4W6 MIR548O-201ENST00000408583 114 ntBASIC1.81□□□□□ -2.12
EBF3Q9H4W6 RNU6-554P-201ENST00000410466 106 ntBASIC1.81□□□□□ -2.12
EBF3Q9H4W6 BTF3P4-201ENST00000418852 495 ntBASIC1.81□□□□□ -2.12
EBF3Q9H4W6 AC087685.1-201ENST00000587507 141 ntBASIC1.81□□□□□ -2.12
EBF3Q9H4W6 AC006441.5-201ENST00000612680 209 ntBASIC1.81□□□□□ -2.12
EBF3Q9H4W6 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.81□□□□□ -2.12
EBF3Q9H4W6 U8.5-201ENST00000364528 136 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 Y_RNA.281-201ENST00000364774 94 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 Y_RNA.547-201ENST00000384654 119 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 SNORA48.1-201ENST00000390879 135 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 RNA5SP109-201ENST00000391010 116 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 AC069257.2-201ENST00000441819 155 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.8□□□□□ -2.12
EBF3Q9H4W6 RNU6-240P-201ENST00000516098 97 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 SNORD36C-201ENST00000516733 66 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
EBF3Q9H4W6 AC024614.2-201ENST00000577584 372 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 MIR502-201ENST00000606349 86 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 snoU13.31-201ENST00000607291 104 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 AL137067.1-201ENST00000615933 120 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 AL035470.1-201ENST00000622571 220 ntBASIC1.8□□□□□ -2.12
EBF3Q9H4W6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
EBF3Q9H4W6 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
EBF3Q9H4W6 Y_RNA.495-201ENST00000384435 112 ntBASIC1.79□□□□□ -2.12
EBF3Q9H4W6 RNU4-62P-201ENST00000410125 130 ntBASIC1.79□□□□□ -2.12
EBF3Q9H4W6 RNA5SP450-201ENST00000411206 102 ntBASIC1.79□□□□□ -2.12
EBF3Q9H4W6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.79□□□□□ -2.12
EBF3Q9H4W6 RNU6-1116P-201ENST00000517269 99 ntBASIC1.79□□□□□ -2.12
EBF3Q9H4W6 AC084364.2-201ENST00000546924 395 ntBASIC1.79□□□□□ -2.12
EBF3Q9H4W6 AC007012.1-201ENST00000567192 175 ntBASIC1.79□□□□□ -2.12
EBF3Q9H4W6 MIR4303-201ENST00000581299 66 ntBASIC1.79□□□□□ -2.12
EBF3Q9H4W6 AC131280.1-202ENST00000624067 4211 ntBASIC1.79□□□□□ -2.12
EBF3Q9H4W6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
EBF3Q9H4W6 RNU6-349P-201ENST00000362402 107 ntBASIC1.78□□□□□ -2.12
EBF3Q9H4W6 Y_RNA.37-201ENST00000362606 108 ntBASIC1.78□□□□□ -2.12
EBF3Q9H4W6 RNU6-1107P-201ENST00000364817 104 ntBASIC1.78□□□□□ -2.12
EBF3Q9H4W6 Y_RNA.309-201ENST00000365046 111 ntBASIC1.78□□□□□ -2.12
EBF3Q9H4W6 MIR570-201ENST00000384917 97 ntBASIC1.78□□□□□ -2.12
EBF3Q9H4W6 RPS26P48-201ENST00000491713 339 ntBASIC1.78□□□□□ -2.12
EBF3Q9H4W6 SNORD45.4-201ENST00000516629 73 ntBASIC1.78□□□□□ -2.12
EBF3Q9H4W6 RNU6-113P-201ENST00000516653 101 ntBASIC1.78□□□□□ -2.12
EBF3Q9H4W6 SUB1P4-201ENST00000566062 339 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms