Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MIR512-1-201ENST00000384913 84 ntBASIC3.33□□□□□ -1.88
PRPF38BQ5VTL8 RNU4-69P-201ENST00000410677 143 ntBASIC3.33□□□□□ -1.88
PRPF38BQ5VTL8 POLR2J4-204ENST00000418424 324 ntBASIC3.33□□□□□ -1.88
PRPF38BQ5VTL8 RNU6-56P-201ENST00000516986 93 ntBASIC3.33□□□□□ -1.88
PRPF38BQ5VTL8 RNU6-958P-201ENST00000516995 106 ntBASIC3.33□□□□□ -1.88
PRPF38BQ5VTL8 MIR4498-201ENST00000577599 66 ntBASIC3.33□□□□□ -1.88
PRPF38BQ5VTL8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.33□□□□□ -1.88
PRPF38BQ5VTL8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRPF38BQ5VTL8 Y_RNA.171-201ENST00000363760 102 ntBASIC3.32□□□□□ -1.88
PRPF38BQ5VTL8 Y_RNA.437-201ENST00000384113 113 ntBASIC3.32□□□□□ -1.88
PRPF38BQ5VTL8 MIR452-201ENST00000385020 85 ntBASIC3.32□□□□□ -1.88
PRPF38BQ5VTL8 MIR518E-201ENST00000385252 88 ntBASIC3.32□□□□□ -1.88
PRPF38BQ5VTL8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.32□□□□□ -1.88
PRPF38BQ5VTL8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRPF38BQ5VTL8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PRPF38BQ5VTL8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PRPF38BQ5VTL8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
PRPF38BQ5VTL8 MIR136-201ENST00000385207 82 ntBASIC3.31□□□□□ -1.88
PRPF38BQ5VTL8 SNORD77B-201ENST00000391112 67 ntBASIC3.31□□□□□ -1.88
PRPF38BQ5VTL8 SNORA7.5-201ENST00000410672 110 ntBASIC3.31□□□□□ -1.88
PRPF38BQ5VTL8 UBBP3-201ENST00000445497 241 ntBASIC3.31□□□□□ -1.88
PRPF38BQ5VTL8 RNU7-53P-201ENST00000516705 60 ntBASIC3.31□□□□□ -1.88
PRPF38BQ5VTL8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF38BQ5VTL8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PRPF38BQ5VTL8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 SNORD56.5-201ENST00000364281 72 ntBASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 SNORA18-201ENST00000384416 132 ntBASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 RNU6-1319P-201ENST00000390855 104 ntBASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 RNU6-747P-201ENST00000390928 104 ntBASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 RNU6-679P-201ENST00000391003 106 ntBASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 RNU6-241P-201ENST00000391148 104 ntBASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 RNU6-177P-201ENST00000411257 104 ntBASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 HMGN2P23-201ENST00000456759 269 ntBASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 RNU7-34P-201ENST00000459394 64 ntBASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PRPF38BQ5VTL8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PRPF38BQ5VTL8 RNA5SP42-201ENST00000364278 115 ntBASIC3.29□□□□□ -1.88
PRPF38BQ5VTL8 SNORD45B-201ENST00000364617 72 ntBASIC3.29□□□□□ -1.88
PRPF38BQ5VTL8 RNU6-1031P-201ENST00000384773 107 ntBASIC3.29□□□□□ -1.88
PRPF38BQ5VTL8 AC093850.1-201ENST00000454121 251 ntBASIC3.29□□□□□ -1.88
PRPF38BQ5VTL8 RNA5SP33-201ENST00000516687 98 ntBASIC3.29□□□□□ -1.88
PRPF38BQ5VTL8 RPPH1-2P-201ENST00000516688 293 ntBASIC3.29□□□□□ -1.88
PRPF38BQ5VTL8 AP000942.3-201ENST00000603702 160 ntBASIC3.29□□□□□ -1.88
PRPF38BQ5VTL8 uc_338.1-201ENST00000612113 180 ntBASIC3.29□□□□□ -1.88
PRPF38BQ5VTL8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PRPF38BQ5VTL8 AC007336.1-201ENST00000576365 3828 ntBASIC3.29□□□□□ -1.88
PRPF38BQ5VTL8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 SNORA22.1-201ENST00000362701 134 ntBASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 Y_RNA.140-201ENST00000363474 103 ntBASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 RNU1-109P-201ENST00000383960 147 ntBASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 Y_RNA.467-201ENST00000384297 102 ntBASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 RNU1-148P-201ENST00000384472 162 ntBASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 RNA5SP261-201ENST00000410536 106 ntBASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 snoU13.18-201ENST00000459483 104 ntBASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 RPL23AP63-201ENST00000498752 471 ntBASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 RNA5SP148-201ENST00000516527 94 ntBASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
PRPF38BQ5VTL8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 Y_RNA.95-201ENST00000363079 95 ntBASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 Y_RNA.377-201ENST00000365644 108 ntBASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 RNU6-24P-201ENST00000384440 107 ntBASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 RNA5SP229-201ENST00000410809 99 ntBASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 Y_RNA.620-201ENST00000411009 88 ntBASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 RPS29P29-201ENST00000456396 171 ntBASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 AC092185.1-201ENST00000491371 97 ntBASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 Y_RNA.705-201ENST00000516862 110 ntBASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.27□□□□□ -1.89
PRPF38BQ5VTL8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 WWP1P1-201ENST00000466609 2769 ntBASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 Y_RNA.96-201ENST00000363092 109 ntBASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 MIR520A-201ENST00000384862 85 ntBASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 MIR499A-201ENST00000384903 122 ntBASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 MIR9-1-201ENST00000385198 89 ntBASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 SNORD67-201ENST00000390833 111 ntBASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 RNU6-887P-201ENST00000410660 100 ntBASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 RN7SL499P-201ENST00000481141 276 ntBASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 AC019288.1-201ENST00000557918 224 ntBASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 AC103810.6-201ENST00000606708 136 ntBASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.26□□□□□ -1.89
PRPF38BQ5VTL8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRPF38BQ5VTL8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PRPF38BQ5VTL8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.25□□□□□ -1.89
PRPF38BQ5VTL8 RNU6-1201P-201ENST00000384227 107 ntBASIC3.25□□□□□ -1.89
PRPF38BQ5VTL8 RNA5SP137-201ENST00000516833 135 ntBASIC3.25□□□□□ -1.89
PRPF38BQ5VTL8 RNU6-1258P-201ENST00000516911 111 ntBASIC3.25□□□□□ -1.89
PRPF38BQ5VTL8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.25□□□□□ -1.89
PRPF38BQ5VTL8 DNAJC19P9-201ENST00000555084 351 ntBASIC3.25□□□□□ -1.89
PRPF38BQ5VTL8 MIR4668-201ENST00000582284 70 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms