Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RNU7-28P-201ENST00000516759 62 ntBASIC2.82□□□□□ -1.96
RSPO4Q2I0M5 AC104027.1-201ENST00000521887 300 ntBASIC2.82□□□□□ -1.96
RSPO4Q2I0M5 AC024995.1-201ENST00000523014 93 ntBASIC2.82□□□□□ -1.96
RSPO4Q2I0M5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.82□□□□□ -1.96
RSPO4Q2I0M5 AC110741.2-201ENST00000605278 268 ntBASIC2.82□□□□□ -1.96
RSPO4Q2I0M5 U1.23-201ENST00000610293 146 ntBASIC2.82□□□□□ -1.96
RSPO4Q2I0M5 RNU1-68P-201ENST00000615382 146 ntBASIC2.82□□□□□ -1.96
RSPO4Q2I0M5 U1.39-201ENST00000621562 146 ntBASIC2.82□□□□□ -1.96
RSPO4Q2I0M5 MIR6717-201ENST00000622747 73 ntBASIC2.82□□□□□ -1.96
RSPO4Q2I0M5 SNORD3E-202ENST00000627253 216 ntBASIC2.82□□□□□ -1.96
RSPO4Q2I0M5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RSPO4Q2I0M5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
RSPO4Q2I0M5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RSPO4Q2I0M5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
RSPO4Q2I0M5 Y_RNA.226-201ENST00000364337 114 ntBASIC2.81□□□□□ -1.96
RSPO4Q2I0M5 RNA5SP252-201ENST00000391131 119 ntBASIC2.81□□□□□ -1.96
RSPO4Q2I0M5 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.81□□□□□ -1.96
RSPO4Q2I0M5 TRIAP1P1-201ENST00000427062 225 ntBASIC2.81□□□□□ -1.96
RSPO4Q2I0M5 AL161788.1-201ENST00000441805 169 ntBASIC2.81□□□□□ -1.96
RSPO4Q2I0M5 snoU13.11-201ENST00000459219 104 ntBASIC2.81□□□□□ -1.96
RSPO4Q2I0M5 DNAJC19P9-201ENST00000555084 351 ntBASIC2.81□□□□□ -1.96
RSPO4Q2I0M5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.81□□□□□ -1.96
RSPO4Q2I0M5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 SNORA63.2-201ENST00000362603 126 ntBASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 RNU6-865P-201ENST00000364772 107 ntBASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 Y_RNA.338-201ENST00000365320 114 ntBASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 RNU6-163P-201ENST00000384396 106 ntBASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 MIR9-1-201ENST00000385198 89 ntBASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 AC015922.2-201ENST00000435593 184 ntBASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 RNU6-687P-201ENST00000516443 89 ntBASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 RNU7-53P-201ENST00000516705 60 ntBASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 MIR4648-201ENST00000580107 72 ntBASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 AL353997.5-201ENST00000618886 171 ntBASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 AC012676.2-201ENST00000619258 186 ntBASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 AL442644.1-201ENST00000454390 3105 ntBASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RSPO4Q2I0M5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 SNORD56.3-201ENST00000363507 71 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 SNORA9.2-201ENST00000365361 133 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 SNORA70.7-201ENST00000384159 133 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 Y_RNA.448-201ENST00000384185 108 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 RNU6-1190P-201ENST00000410811 104 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 SRIP3-201ENST00000413200 219 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 RNU7-170P-201ENST00000459303 61 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 RNU6-70P-201ENST00000516438 60 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 SNORA64.4-201ENST00000516632 81 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 RNU6-958P-201ENST00000516995 106 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 RNU6-1116P-201ENST00000517269 99 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 FAM106DP-201ENST00000586416 501 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 MIR4791-201ENST00000607666 84 ntBASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.79□□□□□ -1.96
RSPO4Q2I0M5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 RNU1-105P-201ENST00000363470 161 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 RNA5SP138-201ENST00000365098 114 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 SNORD38.2-201ENST00000384470 69 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 RNU6-800P-201ENST00000384473 103 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 SNORA2B-201ENST00000384583 137 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 RNU6-296P-201ENST00000384608 107 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 RNA5SP425-201ENST00000410336 112 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 RNU7-67P-201ENST00000459003 62 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 SNORD4B-201ENST00000459083 72 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 RN7SL297P-201ENST00000483161 293 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 SCARNA17.1-201ENST00000516211 143 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 SCARNA17.2-201ENST00000516334 143 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 RNU7-35P-201ENST00000517174 62 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 SCARNA17.4-201ENST00000614296 143 ntBASIC2.78□□□□□ -1.96
RSPO4Q2I0M5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 AC073325.2-201ENST00000339545 159 ntBASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 RNU6-161P-201ENST00000363051 106 ntBASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 RNA5SP133-201ENST00000363368 119 ntBASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 RNU1-112P-201ENST00000364401 164 ntBASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 SNORA1.2-201ENST00000365189 134 ntBASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 RNU6-342P-201ENST00000384521 104 ntBASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 AL138827.1-201ENST00000402666 306 ntBASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 AC245047.3-201ENST00000429428 127 ntBASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 ATP5J2P3-201ENST00000451550 258 ntBASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 AC234781.5-201ENST00000508429 271 ntBASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 Y_RNA.681-201ENST00000516445 113 ntBASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RSPO4Q2I0M5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 MIRLET7C-201ENST00000362160 84 ntBASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 Y_RNA.370-201ENST00000365589 108 ntBASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 RNU6-471P-201ENST00000383944 106 ntBASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 Y_RNA.532-201ENST00000384590 113 ntBASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 MIR512-1-201ENST00000384913 84 ntBASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 SNORD30.1-201ENST00000391309 70 ntBASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 RPS29P29-201ENST00000456396 171 ntBASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 CKS1BP2-201ENST00000497342 240 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms