Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU6-675P-201ENST00000384236 104 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 Y_RNA.531-201ENST00000384589 121 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 Y_RNA.547-201ENST00000384654 119 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 MIR759-201ENST00000390224 91 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 RNU6-279P-201ENST00000391297 101 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.06□□□□□ -1.92
PTCD1O75127 RNU6-402P-201ENST00000410678 103 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 SNORA31.4-201ENST00000516049 129 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 RNU7-6P-201ENST00000516845 62 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 RNA5SP380-201ENST00000517190 98 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 MIR3163-201ENST00000581592 73 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 MIR4305-201ENST00000583252 102 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 AL513534.2-201ENST00000603836 250 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 SNORA28-201ENST00000606769 126 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.06□□□□□ -1.92
PTCD1O75127 AC087741.2-201ENST00000619415 172 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTCD1O75127 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTCD1O75127 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.05□□□□□ -1.92
PTCD1O75127 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.05□□□□□ -1.92
PTCD1O75127 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTCD1O75127 RNU6-170P-201ENST00000362832 104 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 Y_RNA.190-201ENST00000363964 101 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 SNORA4.2-201ENST00000365313 147 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 MIR577-201ENST00000385196 96 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 AL445646.1-201ENST00000431784 216 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 AL591806.2-201ENST00000433122 173 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 HMGN2P3-201ENST00000433603 273 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 HMGN2P5-201ENST00000436882 273 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 AC114811.1-201ENST00000507207 168 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 RNU6-857P-201ENST00000515893 110 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 MIR3618-201ENST00000580330 88 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 MIR5092-201ENST00000583139 88 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 AC095038.3-201ENST00000634439 195 ntBASIC3.05□□□□□ -1.92
PTCD1O75127 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTCD1O75127 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PTCD1O75127 Y_RNA.37-201ENST00000362606 108 ntBASIC3.04□□□□□ -1.92
PTCD1O75127 Y_RNA.440-201ENST00000384120 114 ntBASIC3.04□□□□□ -1.92
PTCD1O75127 Y_RNA.601-201ENST00000410500 113 ntBASIC3.04□□□□□ -1.92
PTCD1O75127 AC004941.2-201ENST00000427009 228 ntBASIC3.04□□□□□ -1.92
PTCD1O75127 SNRPGP14-201ENST00000435400 219 ntBASIC3.04□□□□□ -1.92
PTCD1O75127 AC069257.2-201ENST00000441819 155 ntBASIC3.04□□□□□ -1.92
PTCD1O75127 snoU13.23-201ENST00000458863 104 ntBASIC3.04□□□□□ -1.92
PTCD1O75127 SNORA31.10-201ENST00000516482 106 ntBASIC3.04□□□□□ -1.92
PTCD1O75127 RPPH1-2P-201ENST00000516688 293 ntBASIC3.04□□□□□ -1.92
PTCD1O75127 SNORA31.26-201ENST00000517250 137 ntBASIC3.04□□□□□ -1.92
PTCD1O75127 MIR5588-201ENST00000581890 63 ntBASIC3.04□□□□□ -1.92
PTCD1O75127 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PTCD1O75127 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTCD1O75127 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.03□□□□□ -1.92
PTCD1O75127 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PTCD1O75127 RNU6-1296P-201ENST00000383879 107 ntBASIC3.03□□□□□ -1.92
PTCD1O75127 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PTCD1O75127 MIR1912-201ENST00000410389 80 ntBASIC3.03□□□□□ -1.92
PTCD1O75127 AC092185.1-201ENST00000491371 97 ntBASIC3.03□□□□□ -1.92
PTCD1O75127 RNU7-70P-201ENST00000516941 66 ntBASIC3.03□□□□□ -1.92
PTCD1O75127 AC015712.3-201ENST00000559380 164 ntBASIC3.03□□□□□ -1.92
PTCD1O75127 MIR4777-201ENST00000583710 86 ntBASIC3.03□□□□□ -1.92
PTCD1O75127 AC016717.2-201ENST00000609089 5141 ntBASIC3.02□□□□□ -1.93
PTCD1O75127 RNU6-219P-201ENST00000364728 107 ntBASIC3.02□□□□□ -1.93
PTCD1O75127 MIR518A2-201ENST00000384966 87 ntBASIC3.02□□□□□ -1.93
PTCD1O75127 MIR605-201ENST00000385078 83 ntBASIC3.02□□□□□ -1.93
PTCD1O75127 AL451046.2-201ENST00000403074 277 ntBASIC3.02□□□□□ -1.93
PTCD1O75127 RN7SKP200-201ENST00000410564 320 ntBASIC3.02□□□□□ -1.93
PTCD1O75127 HSPE1P9-201ENST00000440046 311 ntBASIC3.02□□□□□ -1.93
PTCD1O75127 MIR6873-201ENST00000622788 63 ntBASIC3.02□□□□□ -1.93
PTCD1O75127 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PTCD1O75127 SNORD114-1-201ENST00000362705 72 ntBASIC3.01□□□□□ -1.93
PTCD1O75127 RNU1-133P-201ENST00000364867 167 ntBASIC3.01□□□□□ -1.93
PTCD1O75127 Y_RNA.360-201ENST00000365512 102 ntBASIC3.01□□□□□ -1.93
PTCD1O75127 RNU6-242P-201ENST00000384359 107 ntBASIC3.01□□□□□ -1.93
PTCD1O75127 SNORD38C-201ENST00000384381 69 ntBASIC3.01□□□□□ -1.93
PTCD1O75127 MIR1283-2-201ENST00000408621 87 ntBASIC3.01□□□□□ -1.93
PTCD1O75127 AC091932.4-201ENST00000623386 200 ntBASIC3.01□□□□□ -1.93
PTCD1O75127 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTCD1O75127 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PTCD1O75127 RNU6-832P-201ENST00000363319 107 ntBASIC3□□□□□ -1.93
PTCD1O75127 SNORD115-13-201ENST00000363358 82 ntBASIC3□□□□□ -1.93
PTCD1O75127 SNORD115-16-201ENST00000363887 82 ntBASIC3□□□□□ -1.93
PTCD1O75127 SNORD115-1-201ENST00000364961 82 ntBASIC3□□□□□ -1.93
PTCD1O75127 SNORD115-35-201ENST00000365122 82 ntBASIC3□□□□□ -1.93
PTCD1O75127 Y_RNA.437-201ENST00000384113 113 ntBASIC3□□□□□ -1.93
PTCD1O75127 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3□□□□□ -1.93
PTCD1O75127 AL034345.1-201ENST00000407768 123 ntBASIC3□□□□□ -1.93
PTCD1O75127 RPS12P2-201ENST00000439728 269 ntBASIC3□□□□□ -1.93
PTCD1O75127 RNVU1-2-201ENST00000516326 135 ntBASIC3□□□□□ -1.93
PTCD1O75127 SNORA18.7-201ENST00000516910 131 ntBASIC3□□□□□ -1.93
PTCD1O75127 MIR4666B-201ENST00000578142 81 ntBASIC3□□□□□ -1.93
PTCD1O75127 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
PTCD1O75127 RNA5SP465-201ENST00000391195 109 ntBASIC2.99□□□□□ -1.93
PTCD1O75127 RNU2-7P-201ENST00000410794 178 ntBASIC2.99□□□□□ -1.93
PTCD1O75127 AC096949.1-201ENST00000412047 152 ntBASIC2.99□□□□□ -1.93
PTCD1O75127 AL512326.2-201ENST00000426359 151 ntBASIC2.99□□□□□ -1.93
PTCD1O75127 MIR4694-201ENST00000578534 80 ntBASIC2.99□□□□□ -1.93
PTCD1O75127 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PTCD1O75127 RNU6-950P-201ENST00000384651 107 ntBASIC2.98□□□□□ -1.93
PTCD1O75127 SNORA64-201ENST00000384674 134 ntBASIC2.98□□□□□ -1.93
PTCD1O75127 HMGN2P39-201ENST00000398005 273 ntBASIC2.98□□□□□ -1.93
PTCD1O75127 RNU7-171P-201ENST00000459581 62 ntBASIC2.98□□□□□ -1.93
PTCD1O75127 AP003484.1-201ENST00000530974 250 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms