Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNA5SP138-201ENST00000365098 114 ntBASIC3.38□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-480P-201ENST00000384332 107 ntBASIC3.38□□□□□ -1.87
PCDHB3Q9Y5E6 MIR490-201ENST00000384865 128 ntBASIC3.38□□□□□ -1.87
PCDHB3Q9Y5E6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-519P-201ENST00000410590 108 ntBASIC3.38□□□□□ -1.87
PCDHB3Q9Y5E6 AC087499.7-201ENST00000441958 109 ntBASIC3.38□□□□□ -1.87
PCDHB3Q9Y5E6 MIR548AR-201ENST00000582191 57 ntBASIC3.38□□□□□ -1.87
PCDHB3Q9Y5E6 FAM106DP-201ENST00000586416 501 ntBASIC3.38□□□□□ -1.87
PCDHB3Q9Y5E6 MIR3651-201ENST00000630427 90 ntBASIC3.38□□□□□ -1.87
PCDHB3Q9Y5E6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHB3Q9Y5E6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 AL021368.2-201ENST00000606125 5352 ntBASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 RNU1-33P-201ENST00000364249 162 ntBASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 SNORD38.2-201ENST00000384470 69 ntBASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 MIR1236-201ENST00000408340 102 ntBASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 RNA5SP120-201ENST00000410900 112 ntBASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 AL450471.1-201ENST00000447509 127 ntBASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 RN7SL442P-201ENST00000473804 320 ntBASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 SNORA70.18-201ENST00000516696 98 ntBASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 AC105081.1-201ENST00000617727 106 ntBASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB3Q9Y5E6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHB3Q9Y5E6 Y_RNA.168-201ENST00000363740 102 ntBASIC3.36□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-1019P-201ENST00000364424 107 ntBASIC3.36□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-1086P-201ENST00000410930 100 ntBASIC3.36□□□□□ -1.87
PCDHB3Q9Y5E6 RN7SL594P-201ENST00000470590 287 ntBASIC3.36□□□□□ -1.87
PCDHB3Q9Y5E6 RNU7-79P-201ENST00000516082 62 ntBASIC3.36□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-539P-201ENST00000516665 103 ntBASIC3.36□□□□□ -1.87
PCDHB3Q9Y5E6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.36□□□□□ -1.87
PCDHB3Q9Y5E6 MIR2276-201ENST00000516886 89 ntBASIC3.36□□□□□ -1.87
PCDHB3Q9Y5E6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHB3Q9Y5E6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHB3Q9Y5E6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHB3Q9Y5E6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 SNORA2B-201ENST00000384583 137 ntBASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 CST9LP2-201ENST00000437612 320 ntBASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 SNORD123-201ENST00000459473 70 ntBASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 RNU7-137P-201ENST00000516788 62 ntBASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 MTND5P40-201ENST00000559945 246 ntBASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 AC069114.2-201ENST00000604699 304 ntBASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 MIR8065-201ENST00000620577 100 ntBASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHB3Q9Y5E6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU4-35P-201ENST00000362588 141 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 SNORD114-10-201ENST00000363409 72 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-624P-201ENST00000363411 107 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-447P-201ENST00000410293 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-1118P-201ENST00000410382 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-1076P-201ENST00000410397 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-355P-201ENST00000410427 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-791P-201ENST00000410467 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-705P-201ENST00000410601 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-1100P-201ENST00000410691 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-860P-201ENST00000410860 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-1217P-201ENST00000411276 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-785P-201ENST00000411324 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU7-48P-201ENST00000458875 63 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 AC025518.1-201ENST00000479856 347 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 AC234781.5-201ENST00000508429 271 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-917P-201ENST00000516294 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 MIR8055-201ENST00000610739 97 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 U6.90-201ENST00000614007 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 U6.70-201ENST00000620287 104 ntBASIC3.34□□□□□ -1.87
PCDHB3Q9Y5E6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
PCDHB3Q9Y5E6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHB3Q9Y5E6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB3Q9Y5E6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PCDHB3Q9Y5E6 SNORD17-201ENST00000390930 237 ntBASIC3.33□□□□□ -1.88
PCDHB3Q9Y5E6 MIR1289-1-201ENST00000408836 144 ntBASIC3.33□□□□□ -1.88
PCDHB3Q9Y5E6 AC093850.1-201ENST00000454121 251 ntBASIC3.33□□□□□ -1.88
PCDHB3Q9Y5E6 U4.6-201ENST00000621618 127 ntBASIC3.33□□□□□ -1.88
PCDHB3Q9Y5E6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.33□□□□□ -1.88
PCDHB3Q9Y5E6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB3Q9Y5E6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB3Q9Y5E6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB3Q9Y5E6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDHB3Q9Y5E6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB3Q9Y5E6 AC093831.2-201ENST00000624393 3427 ntBASIC3.32□□□□□ -1.88
PCDHB3Q9Y5E6 AL365361.1-201ENST00000566942 3481 ntBASIC3.32□□□□□ -1.88
PCDHB3Q9Y5E6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PCDHB3Q9Y5E6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PCDHB3Q9Y5E6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB3Q9Y5E6 Y_RNA.98-201ENST00000363109 102 ntBASIC3.32□□□□□ -1.88
PCDHB3Q9Y5E6 RNA5SP133-201ENST00000363368 119 ntBASIC3.32□□□□□ -1.88
PCDHB3Q9Y5E6 RNU4-32P-201ENST00000363404 141 ntBASIC3.32□□□□□ -1.88
PCDHB3Q9Y5E6 RNU6-805P-201ENST00000365643 106 ntBASIC3.32□□□□□ -1.88
PCDHB3Q9Y5E6 Y_RNA.537-201ENST00000384626 109 ntBASIC3.32□□□□□ -1.88
PCDHB3Q9Y5E6 RNU6-602P-201ENST00000411155 105 ntBASIC3.32□□□□□ -1.88
PCDHB3Q9Y5E6 snoU13.16-201ENST00000459350 104 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms