Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC023141.11-201ENST00000508864 202 ntBASIC4.42□□□□□ -1.7
RNF39Q9H2S5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC4.42□□□□□ -1.7
RNF39Q9H2S5 AC138907.6-201ENST00000568401 126 ntBASIC4.42□□□□□ -1.7
RNF39Q9H2S5 AC138869.1-201ENST00000568623 124 ntBASIC4.42□□□□□ -1.7
RNF39Q9H2S5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF39Q9H2S5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RNF39Q9H2S5 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.42□□□□□ -1.7
RNF39Q9H2S5 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNF39Q9H2S5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF39Q9H2S5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF39Q9H2S5 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF39Q9H2S5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF39Q9H2S5 RNU1-36P-201ENST00000365130 165 ntBASIC4.41□□□□□ -1.7
RNF39Q9H2S5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF39Q9H2S5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF39Q9H2S5 RNU7-143P-201ENST00000516781 65 ntBASIC4.41□□□□□ -1.7
RNF39Q9H2S5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF39Q9H2S5 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
RNF39Q9H2S5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF39Q9H2S5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF39Q9H2S5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF39Q9H2S5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
RNF39Q9H2S5 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF39Q9H2S5 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RNF39Q9H2S5 MIR424-201ENST00000362227 98 ntBASIC4.4□□□□□ -1.71
RNF39Q9H2S5 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.4□□□□□ -1.71
RNF39Q9H2S5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF39Q9H2S5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF39Q9H2S5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF39Q9H2S5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.39□□□□□ -1.71
RNF39Q9H2S5 RNA5SP296-201ENST00000410523 111 ntBASIC4.39□□□□□ -1.71
RNF39Q9H2S5 AC055731.1-201ENST00000474387 401 ntBASIC4.39□□□□□ -1.71
RNF39Q9H2S5 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF39Q9H2S5 AC025627.2-201ENST00000576220 160 ntBASIC4.39□□□□□ -1.71
RNF39Q9H2S5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF39Q9H2S5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RNF39Q9H2S5 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF39Q9H2S5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF39Q9H2S5 AL359851.1-201ENST00000569460 4997 ntBASIC4.38□□□□□ -1.71
RNF39Q9H2S5 Z82217.1-201ENST00000625157 8149 ntBASIC4.38□□□□□ -1.71
RNF39Q9H2S5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF39Q9H2S5 SNORD35B-201ENST00000363660 87 ntBASIC4.38□□□□□ -1.71
RNF39Q9H2S5 AC099513.1-201ENST00000490423 301 ntBASIC4.38□□□□□ -1.71
RNF39Q9H2S5 SNORA31.11-201ENST00000516528 139 ntBASIC4.38□□□□□ -1.71
RNF39Q9H2S5 SNORA67.7-201ENST00000516664 135 ntBASIC4.38□□□□□ -1.71
RNF39Q9H2S5 uc_338.6-201ENST00000613544 171 ntBASIC4.38□□□□□ -1.71
RNF39Q9H2S5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RNF39Q9H2S5 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF39Q9H2S5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF39Q9H2S5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF39Q9H2S5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF39Q9H2S5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF39Q9H2S5 SNORA60-201ENST00000362396 134 ntBASIC4.37□□□□□ -1.71
RNF39Q9H2S5 RNA5SP372-201ENST00000390836 115 ntBASIC4.37□□□□□ -1.71
RNF39Q9H2S5 RPL29P14-201ENST00000495837 428 ntBASIC4.37□□□□□ -1.71
RNF39Q9H2S5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF39Q9H2S5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF39Q9H2S5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RNF39Q9H2S5 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF39Q9H2S5 MAPK10-320ENST00000641462 6696 ntBASIC4.36□□□□□ -1.71
RNF39Q9H2S5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF39Q9H2S5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF39Q9H2S5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RNF39Q9H2S5 SNORA62.3-201ENST00000365110 153 ntBASIC4.36□□□□□ -1.71
RNF39Q9H2S5 MIR554-201ENST00000384874 96 ntBASIC4.36□□□□□ -1.71
RNF39Q9H2S5 HDGFP1-201ENST00000405943 252 ntBASIC4.36□□□□□ -1.71
RNF39Q9H2S5 MIR5685-201ENST00000579080 79 ntBASIC4.36□□□□□ -1.71
RNF39Q9H2S5 MIR3158-1-201ENST00000583596 81 ntBASIC4.36□□□□□ -1.71
RNF39Q9H2S5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC4.36□□□□□ -1.71
RNF39Q9H2S5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF39Q9H2S5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF39Q9H2S5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF39Q9H2S5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF39Q9H2S5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF39Q9H2S5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF39Q9H2S5 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF39Q9H2S5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF39Q9H2S5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF39Q9H2S5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF39Q9H2S5 MIR670-201ENST00000390142 98 ntBASIC4.35□□□□□ -1.71
RNF39Q9H2S5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF39Q9H2S5 RPL30P7-201ENST00000479312 323 ntBASIC4.35□□□□□ -1.71
RNF39Q9H2S5 SNORA31.26-201ENST00000517250 137 ntBASIC4.35□□□□□ -1.71
RNF39Q9H2S5 SNORA40.17-201ENST00000517256 115 ntBASIC4.35□□□□□ -1.71
RNF39Q9H2S5 RNA5SP179-201ENST00000517284 121 ntBASIC4.35□□□□□ -1.71
RNF39Q9H2S5 MIR548AL-201ENST00000578416 97 ntBASIC4.35□□□□□ -1.71
RNF39Q9H2S5 AC091167.4-201ENST00000605079 184 ntBASIC4.35□□□□□ -1.71
RNF39Q9H2S5 U2.7-201ENST00000619197 100 ntBASIC4.35□□□□□ -1.71
RNF39Q9H2S5 AC110079.1-202ENST00000635213 138 ntBASIC4.35□□□□□ -1.71
RNF39Q9H2S5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF39Q9H2S5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RNF39Q9H2S5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF39Q9H2S5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
RNF39Q9H2S5 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RNF39Q9H2S5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF39Q9H2S5 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF39Q9H2S5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF39Q9H2S5 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RNF39Q9H2S5 RNA5SP171-201ENST00000391071 115 ntBASIC4.34□□□□□ -1.71
RNF39Q9H2S5 AL591623.2-201ENST00000449978 222 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms