Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.73□□□□□ -2.13
CDT1Q9H211 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDT1Q9H211 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.72□□□□□ -2.13
CDT1Q9H211 RNU6-661P-201ENST00000362409 107 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 SNORD50.2-201ENST00000365465 70 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 RNU6-1031P-201ENST00000384773 107 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 RNU6-360P-201ENST00000390944 104 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 SNORA67.5-201ENST00000391036 107 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 RNU6-460P-201ENST00000391158 108 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 RN7SKP200-201ENST00000410564 320 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 RPL31P63-201ENST00000422565 375 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.72□□□□□ -2.13
CDT1Q9H211 RNU6-1299P-201ENST00000516316 100 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 RNU6-197P-201ENST00000516680 100 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 SNORA44.1-201ENST00000517031 108 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.72□□□□□ -2.13
CDT1Q9H211 MIR4709-201ENST00000577272 72 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 MIR548X2-201ENST00000579776 100 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 MIR2681-201ENST00000581814 105 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.72□□□□□ -2.13
CDT1Q9H211 MTND1P7-201ENST00000632801 297 ntBASIC1.72□□□□□ -2.13
CDT1Q9H211 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.71□□□□□ -2.14
CDT1Q9H211 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CDT1Q9H211 Y_RNA.66-201ENST00000362862 102 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 RNU6-508P-201ENST00000363231 103 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 Y_RNA.251-201ENST00000364551 99 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 Y_RNA.432-201ENST00000384087 111 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 Y_RNA.521-201ENST00000384560 114 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 Y_RNA.542-201ENST00000384641 111 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 RNU6-950P-201ENST00000384651 107 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 MIR489-201ENST00000384923 84 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 Y_RNA.586-201ENST00000391146 98 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 MIR1323-201ENST00000408090 73 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 RNU2-55P-201ENST00000411146 174 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 BTF3P4-201ENST00000418852 495 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.71□□□□□ -2.14
CDT1Q9H211 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.71□□□□□ -2.14
CDT1Q9H211 OR9P1P-201ENST00000496431 281 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 Y_RNA.666-201ENST00000516187 112 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.71□□□□□ -2.14
CDT1Q9H211 AL645939.4-201ENST00000604495 135 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 BX248123.2-201ENST00000606318 124 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 AC132825.6-201ENST00000638861 357 ntBASIC1.71□□□□□ -2.14
CDT1Q9H211 ICE2P2-201ENST00000483823 2787 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 SNORD68-201ENST00000363214 84 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 RNU6-1138P-201ENST00000365359 106 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 RNU6-81P-201ENST00000365608 104 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 Y_RNA.393-201ENST00000383936 102 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 SNORA1-201ENST00000384107 130 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 SNORD61-201ENST00000384252 73 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 RNU4-62P-201ENST00000410125 130 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 MTND4LP9-201ENST00000427694 174 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 FTH1P12-201ENST00000432137 551 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 TMSB4XP3-201ENST00000445144 114 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 AC007751.1-201ENST00000529260 376 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 AC112693.2-201ENST00000556538 232 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CDT1Q9H211 AC008507.4-201ENST00000585464 127 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 AC103810.8-201ENST00000607347 118 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 JPX_2.1-201ENST00000614161 69 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 MIR6844-201ENST00000637122 62 ntBASIC1.7□□□□□ -2.14
CDT1Q9H211 MIRLET7C-201ENST00000362160 84 ntBASIC1.69□□□□□ -2.14
CDT1Q9H211 AL034345.1-201ENST00000407768 123 ntBASIC1.69□□□□□ -2.14
CDT1Q9H211 RNU2-70P-201ENST00000410718 179 ntBASIC1.69□□□□□ -2.14
CDT1Q9H211 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.69□□□□□ -2.14
CDT1Q9H211 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.69□□□□□ -2.14
CDT1Q9H211 AC099513.1-201ENST00000490423 301 ntBASIC1.69□□□□□ -2.14
CDT1Q9H211 RNU7-28P-201ENST00000516759 62 ntBASIC1.69□□□□□ -2.14
CDT1Q9H211 AC097639.2-201ENST00000603159 172 ntBASIC1.69□□□□□ -2.14
CDT1Q9H211 AC012493.3-201ENST00000604494 112 ntBASIC1.69□□□□□ -2.14
CDT1Q9H211 AC021506.2-201ENST00000612354 169 ntBASIC1.69□□□□□ -2.14
CDT1Q9H211 AC095038.3-201ENST00000634439 195 ntBASIC1.69□□□□□ -2.14
CDT1Q9H211 AC010332.2-201ENST00000613083 1904 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 RNU1-42P-201ENST00000364033 160 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 RNU6-60P-201ENST00000364792 103 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 SNORD113-1-201ENST00000365321 69 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 RNU6-203P-201ENST00000384038 104 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 MIR548A2-201ENST00000384956 97 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 SNORD37.2-201ENST00000391075 66 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 RNA5SP482-201ENST00000391269 118 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 SNRPGP14-201ENST00000435400 219 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 RNA5SP153-201ENST00000516498 76 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.68□□□□□ -2.14
CDT1Q9H211 SNORD53B-201ENST00000577887 78 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 SNORA28-201ENST00000606769 126 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.68□□□□□ -2.14
CDT1Q9H211 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CDT1Q9H211 MTND5P32-201ENST00000560711 1802 ntBASIC1.68□□□□□ -2.14
CDT1Q9H211 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CDT1Q9H211 RNU6-414P-201ENST00000363705 104 ntBASIC1.67□□□□□ -2.14
CDT1Q9H211 Y_RNA.343-201ENST00000365354 112 ntBASIC1.67□□□□□ -2.14
CDT1Q9H211 RNU6-597P-201ENST00000365620 102 ntBASIC1.67□□□□□ -2.14
CDT1Q9H211 Y_RNA.420-201ENST00000384043 110 ntBASIC1.67□□□□□ -2.14
CDT1Q9H211 CALM2P4-201ENST00000430810 426 ntBASIC1.67□□□□□ -2.14
CDT1Q9H211 Y_RNA.686-201ENST00000516548 134 ntBASIC1.67□□□□□ -2.14
CDT1Q9H211 RNU2-60P-201ENST00000517290 128 ntBASIC1.67□□□□□ -2.14
CDT1Q9H211 AL160236.1-201ENST00000556317 195 ntBASIC1.67□□□□□ -2.14
CDT1Q9H211 MIR3198-2-201ENST00000577868 80 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms