Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU1-58P-201ENST00000362413 163 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 SNORD9-201ENST00000362566 104 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP383-201ENST00000362934 120 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP123-201ENST00000363244 119 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP507-201ENST00000363603 121 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 U8.4-201ENST00000363626 134 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 SNORD8-201ENST00000363915 110 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 SNORD114-6-201ENST00000364393 72 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU1-36P-201ENST00000365130 165 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-580P-201ENST00000365159 107 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU1-136P-201ENST00000384181 164 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR223-201ENST00000385204 110 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR516B1-201ENST00000385211 90 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR1286-201ENST00000408112 78 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU4-34P-201ENST00000410431 124 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP247-201ENST00000411181 105 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 AC093162.1-201ENST00000419682 124 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RPS29P31-201ENST00000446147 164 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 AC073850.1-201ENST00000449243 255 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SL727P-201ENST00000482164 296 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SL636P-201ENST00000497504 294 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 IFITM8P-201ENST00000522529 394 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 AC105129.1-201ENST00000560250 297 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 AC120024.2-201ENST00000576526 175 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR4260-201ENST00000583107 67 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR4264-201ENST00000583520 66 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 AL356218.2-201ENST00000605264 187 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 AC090607.5-201ENST00000615692 224 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 AC109583.2-201ENST00000617367 129 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR6730-201ENST00000622213 67 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR1248-201ENST00000629190 106 ntBASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-4Q9BYR3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP403-201ENST00000363598 108 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP322-201ENST00000363617 119 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RNY4P7-201ENST00000364600 96 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR582-201ENST00000365731 98 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-665P-201ENST00000384639 107 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR105-2-201ENST00000385083 81 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP109-201ENST00000391010 116 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-1197P-201ENST00000391183 107 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR548E-201ENST00000408287 88 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR548AJ2-201ENST00000408539 92 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 SDHDP6-201ENST00000414693 480 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 AC083863.1-201ENST00000438811 231 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 AL356535.1-201ENST00000440335 398 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 AZGP1P2-201ENST00000454506 345 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU7-62P-201ENST00000458856 62 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RPS29P1-201ENST00000465274 159 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP228-201ENST00000516232 133 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 Y_RNA.684-201ENST00000516510 99 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 SCARNA16.4-201ENST00000516956 187 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP373-201ENST00000517271 95 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-1174P-201ENST00000517278 101 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SL290P-201ENST00000578661 300 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SL708P-201ENST00000580952 299 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR4480-201ENST00000582492 71 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR5194-201ENST00000582634 120 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR4723-201ENST00000585070 81 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 AC012616.1-201ENST00000600294 197 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 IMMP1LP3-201ENST00000604197 224 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 AL355297.2-201ENST00000604792 129 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 IGLCOR22-2-201ENST00000605398 313 ntBASIC0.97□□□□□ -2.25
KRTAP4-4Q9BYR3 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms