Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RNU1-45P-201ENST00000517191 141 ntBASIC3.65□□□□□ -1.83
MS4A3Q96HJ5 IST1-227ENST00000626438 126 ntTSL 5 BASIC3.65□□□□□ -1.83
MS4A3Q96HJ5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MS4A3Q96HJ5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MS4A3Q96HJ5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 MIR1179-201ENST00000408703 91 ntBASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 PARP1P2-201ENST00000556806 195 ntBASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 MTRNR2L2-201ENST00000604882 87 ntBASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 AC007179.3-201ENST00000604976 235 ntBASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 MIR8059-201ENST00000620427 81 ntBASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 U6.100-201ENST00000636230 99 ntBASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MS4A3Q96HJ5 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
MS4A3Q96HJ5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.63□□□□□ -1.83
MS4A3Q96HJ5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.63□□□□□ -1.83
MS4A3Q96HJ5 RNU6-935P-201ENST00000410371 100 ntBASIC3.63□□□□□ -1.83
MS4A3Q96HJ5 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
MS4A3Q96HJ5 RN7SL600P-201ENST00000581811 299 ntBASIC3.63□□□□□ -1.83
MS4A3Q96HJ5 MIR486-1-201ENST00000612171 68 ntBASIC3.63□□□□□ -1.83
MS4A3Q96HJ5 MIR6740-201ENST00000618268 113 ntBASIC3.63□□□□□ -1.83
MS4A3Q96HJ5 AC007318.2-201ENST00000620999 243 ntBASIC3.63□□□□□ -1.83
MS4A3Q96HJ5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
MS4A3Q96HJ5 Z82217.1-201ENST00000625157 8149 ntBASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 RNU6-1260P-201ENST00000362944 107 ntBASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 AC244098.3-201ENST00000424803 96 ntBASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 snoU13.27-201ENST00000459278 104 ntBASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 RNU7-41P-201ENST00000515917 61 ntBASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 SCARNA21.1-201ENST00000515996 128 ntBASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 Y_RNA.809-201ENST00000516058 95 ntBASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 MIR3920-201ENST00000581751 86 ntBASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 MIR4697-201ENST00000582977 78 ntBASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 RNU7-10P-201ENST00000607194 63 ntBASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 MIR4773-1-201ENST00000637203 78 ntBASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MS4A3Q96HJ5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.61□□□□□ -1.83
MS4A3Q96HJ5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
MS4A3Q96HJ5 AL596028.1-201ENST00000326971 197 ntBASIC3.61□□□□□ -1.83
MS4A3Q96HJ5 SNORA70C-201ENST00000384538 135 ntBASIC3.61□□□□□ -1.83
MS4A3Q96HJ5 TRAJ51-201ENST00000504127 63 ntBASIC3.61□□□□□ -1.83
MS4A3Q96HJ5 RNA5SP437-201ENST00000517249 129 ntBASIC3.61□□□□□ -1.83
MS4A3Q96HJ5 MIR3616-201ENST00000584070 92 ntBASIC3.61□□□□□ -1.83
MS4A3Q96HJ5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
MS4A3Q96HJ5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
MS4A3Q96HJ5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MS4A3Q96HJ5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
MS4A3Q96HJ5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 OTUD4P1-201ENST00000237841 3067 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 RNA5SP48-201ENST00000363969 126 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 Y_RNA.536-201ENST00000384621 113 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 MT-TF-201ENST00000387314 71 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 RNU6-1177P-201ENST00000391058 104 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 RPS26P8-201ENST00000393490 348 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 SNORD100-201ENST00000408573 76 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 RHEBP3-201ENST00000411920 351 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 AC006011.1-201ENST00000442758 349 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 HMGN2P7-201ENST00000456186 273 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 RNA5SP246-201ENST00000458909 119 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 RNA5SP481-201ENST00000516814 122 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 MIR3938-201ENST00000582157 103 ntBASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MS4A3Q96HJ5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 RNA5SP130-201ENST00000364431 114 ntBASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 MIR451A-201ENST00000385059 72 ntBASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 RNU6-1165P-201ENST00000410119 107 ntBASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 RNA5SP317-201ENST00000410176 116 ntBASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 RNA5SP311-201ENST00000411290 116 ntBASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 RNU6-1052P-201ENST00000411398 104 ntBASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 BX510359.4-201ENST00000423750 193 ntBASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 RN7SL604P-201ENST00000492589 296 ntBASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 RNA5SP315-201ENST00000516340 116 ntBASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 RNU6-719P-201ENST00000516671 104 ntBASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 RNA5SP312-201ENST00000517068 116 ntBASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 PRELID3BP2-201ENST00000605362 201 ntBASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MS4A3Q96HJ5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms