Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TRBV12-1-201ENST00000479785 344 ntBASIC2.79□□□□□ -1.96
SHKBP1Q8TBC3 RNU6-998P-201ENST00000515894 101 ntBASIC2.79□□□□□ -1.96
SHKBP1Q8TBC3 AC021613.1-201ENST00000623880 111 ntBASIC2.79□□□□□ -1.96
SHKBP1Q8TBC3 ICE2P2-201ENST00000483823 2787 ntBASIC2.78□□□□□ -1.96
SHKBP1Q8TBC3 SNORD114-6-201ENST00000364393 72 ntBASIC2.78□□□□□ -1.96
SHKBP1Q8TBC3 RNA5SP482-201ENST00000391269 118 ntBASIC2.78□□□□□ -1.96
SHKBP1Q8TBC3 SNORD88.1-201ENST00000408684 91 ntBASIC2.78□□□□□ -1.96
SHKBP1Q8TBC3 RNU6-887P-201ENST00000410660 100 ntBASIC2.78□□□□□ -1.96
SHKBP1Q8TBC3 CKS1BP2-201ENST00000497342 240 ntBASIC2.78□□□□□ -1.96
SHKBP1Q8TBC3 Y_RNA.705-201ENST00000516862 110 ntBASIC2.78□□□□□ -1.96
SHKBP1Q8TBC3 MIR3124-201ENST00000582636 67 ntBASIC2.78□□□□□ -1.96
SHKBP1Q8TBC3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.78□□□□□ -1.97
SHKBP1Q8TBC3 Y_RNA.299-201ENST00000364973 94 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 RNU6-1201P-201ENST00000384227 107 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 Y_RNA.467-201ENST00000384297 102 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 RNU6-24P-201ENST00000384440 107 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 SNORA67.4-201ENST00000384688 142 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 SNORA7.5-201ENST00000410672 110 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 RNU4-69P-201ENST00000410677 143 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 RNU2-63P-201ENST00000410792 194 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 Y_RNA.620-201ENST00000411009 88 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 RNA5SP508-201ENST00000411327 119 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 SRIP3-201ENST00000413200 219 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 RNU7-96P-201ENST00000459535 64 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 AC018868.1-201ENST00000491307 315 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 RN7SL636P-201ENST00000497504 294 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 RPL23AP63-201ENST00000498752 471 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 RNU6-711P-201ENST00000517255 106 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 AC092881.1-201ENST00000638218 2733 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 MAPK10-266ENST00000641066 6555 ntBASIC2.77□□□□□ -1.97
SHKBP1Q8TBC3 Y_RNA.241-201ENST00000364470 117 ntBASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 Y_RNA.494-201ENST00000384432 111 ntBASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 CST2P1-201ENST00000425770 87 ntBASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 AL606517.2-201ENST00000442855 241 ntBASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 RNA5SP282-201ENST00000516355 108 ntBASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 RNU6-1018P-201ENST00000516577 106 ntBASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 RNU6-667P-201ENST00000517186 102 ntBASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 AC019288.1-201ENST00000557918 224 ntBASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 MIR4668-201ENST00000582284 70 ntBASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 MIR3605-201ENST00000583214 100 ntBASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHKBP1Q8TBC3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SHKBP1Q8TBC3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.75□□□□□ -1.97
SHKBP1Q8TBC3 SNORA25.6-201ENST00000364121 118 ntBASIC2.75□□□□□ -1.97
SHKBP1Q8TBC3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.75□□□□□ -1.97
SHKBP1Q8TBC3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.75□□□□□ -1.97
SHKBP1Q8TBC3 Y_RNA.659-201ENST00000515994 113 ntBASIC2.75□□□□□ -1.97
SHKBP1Q8TBC3 RNU6-1258P-201ENST00000516911 111 ntBASIC2.75□□□□□ -1.97
SHKBP1Q8TBC3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SHKBP1Q8TBC3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SHKBP1Q8TBC3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SHKBP1Q8TBC3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SHKBP1Q8TBC3 AL442644.1-201ENST00000454390 3105 ntBASIC2.74□□□□□ -1.97
SHKBP1Q8TBC3 Y_RNA.171-201ENST00000363760 102 ntBASIC2.74□□□□□ -1.97
SHKBP1Q8TBC3 Y_RNA.426-201ENST00000384068 113 ntBASIC2.74□□□□□ -1.97
SHKBP1Q8TBC3 RNU6-616P-201ENST00000384353 107 ntBASIC2.74□□□□□ -1.97
SHKBP1Q8TBC3 SNORD38C-201ENST00000384381 69 ntBASIC2.74□□□□□ -1.97
SHKBP1Q8TBC3 RNU2-40P-201ENST00000410833 196 ntBASIC2.74□□□□□ -1.97
SHKBP1Q8TBC3 MIR1270-201ENST00000459320 83 ntBASIC2.74□□□□□ -1.97
SHKBP1Q8TBC3 AC114811.1-201ENST00000507207 168 ntBASIC2.74□□□□□ -1.97
SHKBP1Q8TBC3 AC008413.1-201ENST00000511864 177 ntBASIC2.74□□□□□ -1.97
SHKBP1Q8TBC3 RNU7-28P-201ENST00000516759 62 ntBASIC2.74□□□□□ -1.97
SHKBP1Q8TBC3 SNORD59.2-201ENST00000516873 68 ntBASIC2.74□□□□□ -1.97
SHKBP1Q8TBC3 AC090821.2-201ENST00000523552 176 ntBASIC2.74□□□□□ -1.97
SHKBP1Q8TBC3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-34-201ENST00000362441 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-12-201ENST00000362583 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-29-201ENST00000362834 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-2-201ENST00000362842 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-9-201ENST00000362912 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-21-201ENST00000362963 81 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-14-201ENST00000363090 81 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-41-201ENST00000363608 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-11-201ENST00000363616 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-5-201ENST00000363633 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-39-201ENST00000363694 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-4-201ENST00000363810 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-6-201ENST00000363942 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-42-201ENST00000364273 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORA68.1-201ENST00000364537 132 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-15-201ENST00000364809 81 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-26-201ENST00000365067 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-10-201ENST00000365073 81 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-20-201ENST00000365099 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-43-201ENST00000365503 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 SNORD115-36-201ENST00000365629 82 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 MIR561-201ENST00000385216 97 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 RNU7-113P-201ENST00000459273 62 ntBASIC2.73□□□□□ -1.97
SHKBP1Q8TBC3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms