Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 MIR452-201ENST00000385020 85 ntBASIC2.14□□□□□ -2.07
DDX53Q86TM3 JTBP1-201ENST00000441314 247 ntBASIC2.14□□□□□ -2.07
DDX53Q86TM3 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
DDX53Q86TM3 AC079804.2-201ENST00000490376 200 ntBASIC2.14□□□□□ -2.07
DDX53Q86TM3 SUMO2P16-201ENST00000519475 264 ntBASIC2.14□□□□□ -2.07
DDX53Q86TM3 MIR4498-201ENST00000577599 66 ntBASIC2.14□□□□□ -2.07
DDX53Q86TM3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.14□□□□□ -2.07
DDX53Q86TM3 RNU6-661P-201ENST00000362409 107 ntBASIC2.13□□□□□ -2.07
DDX53Q86TM3 Y_RNA.118-201ENST00000363300 101 ntBASIC2.13□□□□□ -2.07
DDX53Q86TM3 SNORD115-28-201ENST00000363931 81 ntBASIC2.13□□□□□ -2.07
DDX53Q86TM3 RNU6-457P-201ENST00000363999 107 ntBASIC2.13□□□□□ -2.07
DDX53Q86TM3 RNU6-704P-201ENST00000364162 103 ntBASIC2.13□□□□□ -2.07
DDX53Q86TM3 RNU6-460P-201ENST00000391158 108 ntBASIC2.13□□□□□ -2.07
DDX53Q86TM3 RNA5SP127-201ENST00000411051 133 ntBASIC2.13□□□□□ -2.07
DDX53Q86TM3 AC004965.1-201ENST00000413033 213 ntBASIC2.13□□□□□ -2.07
DDX53Q86TM3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.13□□□□□ -2.07
DDX53Q86TM3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.13□□□□□ -2.07
DDX53Q86TM3 MIR5002-201ENST00000584713 97 ntBASIC2.13□□□□□ -2.07
DDX53Q86TM3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
DDX53Q86TM3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
DDX53Q86TM3 Y_RNA.251-201ENST00000364551 99 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 SNORD50.2-201ENST00000365465 70 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 MIR526A1-201ENST00000384897 85 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 MIR624-201ENST00000385217 97 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 Y_RNA.584-201ENST00000391090 114 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 SNORD77.3-201ENST00000391113 65 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 SNORA40.18-201ENST00000391200 128 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.12□□□□□ -2.07
DDX53Q86TM3 RNA5SP233-201ENST00000459153 113 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 MIR3910-1-201ENST00000580936 111 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 MIR4781-201ENST00000585250 76 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 AC134878.1-201ENST00000619901 243 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 AC106754.2-201ENST00000623006 233 ntBASIC2.12□□□□□ -2.07
DDX53Q86TM3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.12□□□□□ -2.07
DDX53Q86TM3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.11□□□□□ -2.07
DDX53Q86TM3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
DDX53Q86TM3 Y_RNA.37-201ENST00000362606 108 ntBASIC2.11□□□□□ -2.07
DDX53Q86TM3 RNU1-17P-201ENST00000363022 152 ntBASIC2.11□□□□□ -2.07
DDX53Q86TM3 RNU6-1292P-201ENST00000383856 107 ntBASIC2.11□□□□□ -2.07
DDX53Q86TM3 Y_RNA.420-201ENST00000384043 110 ntBASIC2.11□□□□□ -2.07
DDX53Q86TM3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
DDX53Q86TM3 MIR1267-201ENST00000408723 78 ntBASIC2.11□□□□□ -2.07
DDX53Q86TM3 AL161935.2-201ENST00000414627 60 ntBASIC2.11□□□□□ -2.07
DDX53Q86TM3 AP001485.1-201ENST00000604799 199 ntBASIC2.11□□□□□ -2.07
DDX53Q86TM3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.11□□□□□ -2.07
DDX53Q86TM3 MIR136-201ENST00000385207 82 ntBASIC2.1□□□□□ -2.07
DDX53Q86TM3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.1□□□□□ -2.07
DDX53Q86TM3 TMSB4XP3-201ENST00000445144 114 ntBASIC2.1□□□□□ -2.07
DDX53Q86TM3 RNU6-830P-201ENST00000516353 107 ntBASIC2.1□□□□□ -2.07
DDX53Q86TM3 MIR5089-201ENST00000580047 84 ntBASIC2.1□□□□□ -2.07
DDX53Q86TM3 AC131055.1-201ENST00000584626 316 ntBASIC2.1□□□□□ -2.07
DDX53Q86TM3 AC010332.2-201ENST00000613083 1904 ntBASIC2.1□□□□□ -2.07
DDX53Q86TM3 Y_RNA.508-201ENST00000384502 114 ntBASIC2.09□□□□□ -2.07
DDX53Q86TM3 AL445685.2-201ENST00000422551 342 ntBASIC2.09□□□□□ -2.07
DDX53Q86TM3 AC090255.1-201ENST00000495779 349 ntBASIC2.09□□□□□ -2.07
DDX53Q86TM3 RNU4-57P-201ENST00000515980 135 ntBASIC2.09□□□□□ -2.07
DDX53Q86TM3 SNORD36C-201ENST00000516733 66 ntBASIC2.09□□□□□ -2.07
DDX53Q86TM3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.09□□□□□ -2.07
DDX53Q86TM3 MIR8074-201ENST00000615081 81 ntBASIC2.09□□□□□ -2.07
DDX53Q86TM3 AC091895.1-201ENST00000624494 256 ntBASIC2.09□□□□□ -2.07
DDX53Q86TM3 MIR376A2-201ENST00000636782 80 ntBASIC2.09□□□□□ -2.07
DDX53Q86TM3 AP000553.5-201ENST00000641933 54 ntBASIC2.09□□□□□ -2.07
DDX53Q86TM3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
DDX53Q86TM3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
DDX53Q86TM3 AL442644.1-201ENST00000454390 3105 ntBASIC2.08□□□□□ -2.08
DDX53Q86TM3 Y_RNA.52-201ENST00000362760 96 ntBASIC2.08□□□□□ -2.08
DDX53Q86TM3 RNA5SP259-201ENST00000365541 109 ntBASIC2.08□□□□□ -2.08
DDX53Q86TM3 RNU6-1189P-201ENST00000383958 107 ntBASIC2.08□□□□□ -2.08
DDX53Q86TM3 RNU6-257P-201ENST00000410238 98 ntBASIC2.08□□□□□ -2.08
DDX53Q86TM3 RNU6-938P-201ENST00000411285 103 ntBASIC2.08□□□□□ -2.08
DDX53Q86TM3 SNORA77B-201ENST00000578179 125 ntBASIC2.08□□□□□ -2.08
DDX53Q86TM3 FAM106DP-201ENST00000586416 501 ntBASIC2.08□□□□□ -2.08
DDX53Q86TM3 AC103810.8-201ENST00000607347 118 ntBASIC2.08□□□□□ -2.08
DDX53Q86TM3 AL627230.6-201ENST00000611129 280 ntBASIC2.08□□□□□ -2.08
DDX53Q86TM3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
DDX53Q86TM3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
DDX53Q86TM3 Y_RNA.410-201ENST00000383992 113 ntBASIC2.07□□□□□ -2.08
DDX53Q86TM3 MIR513A1-201ENST00000385138 129 ntBASIC2.07□□□□□ -2.08
DDX53Q86TM3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.07□□□□□ -2.08
DDX53Q86TM3 RNU6-789P-201ENST00000517105 102 ntBASIC2.07□□□□□ -2.08
DDX53Q86TM3 RNU7-181P-201ENST00000517234 74 ntBASIC2.07□□□□□ -2.08
DDX53Q86TM3 AP003484.1-201ENST00000530974 250 ntBASIC2.07□□□□□ -2.08
DDX53Q86TM3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
DDX53Q86TM3 U8.1-201ENST00000362843 134 ntBASIC2.06□□□□□ -2.08
DDX53Q86TM3 SNORA40-201ENST00000388090 126 ntBASIC2.06□□□□□ -2.08
DDX53Q86TM3 U8.17-201ENST00000391292 132 ntBASIC2.06□□□□□ -2.08
DDX53Q86TM3 MTND4LP9-201ENST00000427694 174 ntBASIC2.06□□□□□ -2.08
DDX53Q86TM3 AC087499.4-201ENST00000448505 178 ntBASIC2.06□□□□□ -2.08
DDX53Q86TM3 RNU6-917P-201ENST00000516294 104 ntBASIC2.06□□□□□ -2.08
DDX53Q86TM3 Y_RNA.686-201ENST00000516548 134 ntBASIC2.06□□□□□ -2.08
DDX53Q86TM3 AP001328.1-201ENST00000528550 176 ntBASIC2.06□□□□□ -2.08
DDX53Q86TM3 MIR5197-201ENST00000583721 112 ntBASIC2.06□□□□□ -2.08
DDX53Q86TM3 MTND5P32-201ENST00000560711 1802 ntBASIC2.05□□□□□ -2.08
DDX53Q86TM3 AL359851.1-201ENST00000569460 4997 ntBASIC2.05□□□□□ -2.08
DDX53Q86TM3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
DDX53Q86TM3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
DDX53Q86TM3 RNU6-915P-201ENST00000364943 103 ntBASIC2.05□□□□□ -2.08
DDX53Q86TM3 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
DDX53Q86TM3 Y_RNA.586-201ENST00000391146 98 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 310.1 ms