Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL627390.1-201ENST00000396055 340 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 MRPL35P3-201ENST00000421557 364 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 AL353813.1-201ENST00000440700 253 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 RNU7-94P-201ENST00000459576 63 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 AL163195.1-201ENST00000496941 348 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 SNORA31.4-201ENST00000516049 129 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 RNA5SP24-201ENST00000516478 95 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF43Q68DV7 AL353149.1-201ENST00000610667 244 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.85□□□□□ -1.95
RNF43Q68DV7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
RNF43Q68DV7 AL161431.1-201ENST00000618966 4205 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.84□□□□□ -1.95
RNF43Q68DV7 SNORD115-35-201ENST00000365122 82 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 RNU6-1296P-201ENST00000383879 107 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 SNORD21-201ENST00000383953 95 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 Y_RNA.437-201ENST00000384113 113 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 SNORA18-201ENST00000384416 132 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 SNORA7.5-201ENST00000410672 110 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 AL022718.1-201ENST00000412004 84 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 AC003685.2-201ENST00000422795 395 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF43Q68DV7 AC003982.1-202ENST00000469928 248 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 RNU6-857P-201ENST00000515893 110 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 MIR4666B-201ENST00000578142 81 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 MIR3605-201ENST00000583214 100 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 CTSLP2-204ENST00000629029 392 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 MIR7157-201ENST00000635801 60 ntBASIC2.84□□□□□ -1.95
RNF43Q68DV7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
RNF43Q68DV7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RNF43Q68DV7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.84□□□□□ -1.96
RNF43Q68DV7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
RNF43Q68DV7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
RNF43Q68DV7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RNF43Q68DV7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RNF43Q68DV7 RNU6-679P-201ENST00000391003 106 ntBASIC2.83□□□□□ -1.96
RNF43Q68DV7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF43Q68DV7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.83□□□□□ -1.96
RNF43Q68DV7 CYP2C59P-201ENST00000457790 269 ntBASIC2.83□□□□□ -1.96
RNF43Q68DV7 RNU2-11P-201ENST00000459191 187 ntBASIC2.83□□□□□ -1.96
RNF43Q68DV7 SNORD53-201ENST00000579969 78 ntBASIC2.83□□□□□ -1.96
RNF43Q68DV7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.83□□□□□ -1.96
RNF43Q68DV7 MIR26A1-201ENST00000362205 77 ntBASIC2.82□□□□□ -1.96
RNF43Q68DV7 RNU6-219P-201ENST00000364728 107 ntBASIC2.82□□□□□ -1.96
RNF43Q68DV7 SNORA27-201ENST00000384323 126 ntBASIC2.82□□□□□ -1.96
RNF43Q68DV7 AL035398.1-201ENST00000430869 322 ntBASIC2.82□□□□□ -1.96
RNF43Q68DV7 RNU7-171P-201ENST00000459581 62 ntBASIC2.82□□□□□ -1.96
RNF43Q68DV7 RPS29P12-201ENST00000460178 152 ntBASIC2.82□□□□□ -1.96
RNF43Q68DV7 AC021613.1-201ENST00000623880 111 ntBASIC2.82□□□□□ -1.96
RNF43Q68DV7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF43Q68DV7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RNF43Q68DV7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
RNF43Q68DV7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RNF43Q68DV7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RNF43Q68DV7 Y_RNA.95-201ENST00000363079 95 ntBASIC2.81□□□□□ -1.96
RNF43Q68DV7 SNORD115-13-201ENST00000363358 82 ntBASIC2.81□□□□□ -1.96
RNF43Q68DV7 SNORD115-16-201ENST00000363887 82 ntBASIC2.81□□□□□ -1.96
RNF43Q68DV7 SNORD114-6-201ENST00000364393 72 ntBASIC2.81□□□□□ -1.96
RNF43Q68DV7 SNORD45B-201ENST00000364617 72 ntBASIC2.81□□□□□ -1.96
RNF43Q68DV7 SNORD115-1-201ENST00000364961 82 ntBASIC2.81□□□□□ -1.96
RNF43Q68DV7 Y_RNA.467-201ENST00000384297 102 ntBASIC2.81□□□□□ -1.96
RNF43Q68DV7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.81□□□□□ -1.96
RNF43Q68DV7 RPL23AP63-201ENST00000498752 471 ntBASIC2.81□□□□□ -1.96
RNF43Q68DV7 SNORA48.11-201ENST00000517015 89 ntBASIC2.81□□□□□ -1.96
RNF43Q68DV7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.81□□□□□ -1.96
RNF43Q68DV7 AC010297.1-201ENST00000623948 149 ntBASIC2.81□□□□□ -1.96
RNF43Q68DV7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RNF43Q68DV7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
RNF43Q68DV7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.81□□□□□ -1.96
RNF43Q68DV7 AC007336.1-201ENST00000576365 3828 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RNF43Q68DV7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 RNA5SP68-201ENST00000363885 119 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 Y_RNA.241-201ENST00000364470 117 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 Y_RNA.494-201ENST00000384432 111 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 POLR2J4-204ENST00000418424 324 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 RNU6-998P-201ENST00000515894 101 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 Y_RNA.659-201ENST00000515994 113 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 RNA5SP282-201ENST00000516355 108 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 RNU6-667P-201ENST00000517186 102 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 AL356280.1-201ENST00000603614 379 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 MIR6817-201ENST00000615588 66 ntBASIC2.8□□□□□ -1.96
RNF43Q68DV7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RNF43Q68DV7 Y_RNA.96-201ENST00000363092 109 ntBASIC2.79□□□□□ -1.96
RNF43Q68DV7 Y_RNA.171-201ENST00000363760 102 ntBASIC2.79□□□□□ -1.96
RNF43Q68DV7 RNA5SP482-201ENST00000391269 118 ntBASIC2.79□□□□□ -1.96
RNF43Q68DV7 RNU4-69P-201ENST00000410677 143 ntBASIC2.79□□□□□ -1.96
RNF43Q68DV7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.79□□□□□ -1.96
RNF43Q68DV7 Y_RNA.705-201ENST00000516862 110 ntBASIC2.79□□□□□ -1.96
RNF43Q68DV7 AC024995.1-201ENST00000523014 93 ntBASIC2.79□□□□□ -1.96
RNF43Q68DV7 ZNF861P-201ENST00000588126 639 ntBASIC2.79□□□□□ -1.96
RNF43Q68DV7 AC092881.1-201ENST00000638218 2733 ntBASIC2.79□□□□□ -1.96
RNF43Q68DV7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF43Q68DV7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
RNF43Q68DV7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.78□□□□□ -1.96
RNF43Q68DV7 Y_RNA.299-201ENST00000364973 94 ntBASIC2.78□□□□□ -1.96
RNF43Q68DV7 RNU6-1201P-201ENST00000384227 107 ntBASIC2.78□□□□□ -1.96
RNF43Q68DV7 SNORD38C-201ENST00000384381 69 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms