Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SNORA64.4-201ENST00000516632 81 ntBASIC3.5□□□□□ -1.85
RC3H1Q5TC82 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
RC3H1Q5TC82 AC093010.3-201ENST00000570269 15214 ntBASIC3.5□□□□□ -1.85
RC3H1Q5TC82 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RC3H1Q5TC82 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RC3H1Q5TC82 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-34-201ENST00000362441 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-12-201ENST00000362583 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-29-201ENST00000362834 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-9-201ENST00000362912 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-21-201ENST00000362963 81 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-14-201ENST00000363090 81 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-41-201ENST00000363608 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-11-201ENST00000363616 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-5-201ENST00000363633 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-39-201ENST00000363694 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-4-201ENST00000363810 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-6-201ENST00000363942 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-42-201ENST00000364273 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORA1.1-201ENST00000364671 133 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-15-201ENST00000364809 81 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-26-201ENST00000365067 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-10-201ENST00000365073 81 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-43-201ENST00000365503 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 SNORD115-36-201ENST00000365629 82 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 FO393413.1-201ENST00000402892 195 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.49□□□□□ -1.85
RC3H1Q5TC82 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.49□□□□□ -1.85
RC3H1Q5TC82 CYP2C59P-201ENST00000457790 269 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.49□□□□□ -1.85
RC3H1Q5TC82 MIR7157-201ENST00000635801 60 ntBASIC3.49□□□□□ -1.85
RC3H1Q5TC82 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RC3H1Q5TC82 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RC3H1Q5TC82 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RC3H1Q5TC82 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RC3H1Q5TC82 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
RC3H1Q5TC82 AC009487.2-201ENST00000420969 6821 ntBASIC3.48□□□□□ -1.85
RC3H1Q5TC82 RNA5SP383-201ENST00000362934 120 ntBASIC3.48□□□□□ -1.85
RC3H1Q5TC82 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.48□□□□□ -1.85
RC3H1Q5TC82 MIR1270-201ENST00000459320 83 ntBASIC3.48□□□□□ -1.85
RC3H1Q5TC82 AC108729.3-201ENST00000513484 108 ntBASIC3.48□□□□□ -1.85
RC3H1Q5TC82 AC090821.2-201ENST00000523552 176 ntBASIC3.48□□□□□ -1.85
RC3H1Q5TC82 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.48□□□□□ -1.85
RC3H1Q5TC82 MIR548AE2-201ENST00000583456 67 ntBASIC3.48□□□□□ -1.85
RC3H1Q5TC82 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.48□□□□□ -1.85
RC3H1Q5TC82 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RC3H1Q5TC82 Y_RNA.470-201ENST00000384307 117 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 MIR512-1-201ENST00000384913 84 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 RNU6-1319P-201ENST00000390855 104 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 RNU6-747P-201ENST00000390928 104 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 RNU6-241P-201ENST00000391148 104 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 RNU2-63P-201ENST00000410792 194 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 RNU6-177P-201ENST00000411257 104 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 SRIP3-201ENST00000413200 219 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 RNU7-45P-201ENST00000459460 63 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 UBL5P3-201ENST00000475112 231 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 CKS1BP2-201ENST00000497342 240 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 RNA5SP33-201ENST00000516687 98 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 RNU7-28P-201ENST00000516759 62 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 SNORA48.11-201ENST00000517015 89 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 SNORA31.26-201ENST00000517250 137 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 MIR3199-1-201ENST00000582434 88 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 AC103810.7-201ENST00000607821 91 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 MIR376B-201ENST00000614515 100 ntBASIC3.47□□□□□ -1.85
RC3H1Q5TC82 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RC3H1Q5TC82 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
RC3H1Q5TC82 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.46□□□□□ -1.86
RC3H1Q5TC82 AC090844.1-201ENST00000422019 156 ntBASIC3.46□□□□□ -1.86
RC3H1Q5TC82 AC104332.2-201ENST00000429959 156 ntBASIC3.46□□□□□ -1.86
RC3H1Q5TC82 ATP5J2P3-201ENST00000451550 258 ntBASIC3.46□□□□□ -1.86
RC3H1Q5TC82 RN7SL636P-201ENST00000497504 294 ntBASIC3.46□□□□□ -1.86
RC3H1Q5TC82 AC114811.1-201ENST00000507207 168 ntBASIC3.46□□□□□ -1.86
RC3H1Q5TC82 RNA5SP282-201ENST00000516355 108 ntBASIC3.46□□□□□ -1.86
RC3H1Q5TC82 RPPH1-2P-201ENST00000516688 293 ntBASIC3.46□□□□□ -1.86
RC3H1Q5TC82 RNU6-86P-201ENST00000606534 107 ntBASIC3.46□□□□□ -1.86
RC3H1Q5TC82 SNORA25.6-201ENST00000364121 118 ntBASIC3.45□□□□□ -1.86
RC3H1Q5TC82 SNORA46-201ENST00000384762 135 ntBASIC3.45□□□□□ -1.86
RC3H1Q5TC82 SNORA3.2-201ENST00000408221 125 ntBASIC3.45□□□□□ -1.86
RC3H1Q5TC82 Y_RNA.609-201ENST00000410669 89 ntBASIC3.45□□□□□ -1.86
RC3H1Q5TC82 CST2P1-201ENST00000425770 87 ntBASIC3.45□□□□□ -1.86
RC3H1Q5TC82 RN7SL297P-201ENST00000483161 293 ntBASIC3.45□□□□□ -1.86
RC3H1Q5TC82 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.45□□□□□ -1.86
RC3H1Q5TC82 MIR3152-201ENST00000579801 74 ntBASIC3.45□□□□□ -1.86
RC3H1Q5TC82 AL356280.1-201ENST00000603614 379 ntBASIC3.45□□□□□ -1.86
RC3H1Q5TC82 AC110079.1-202ENST00000635213 138 ntBASIC3.45□□□□□ -1.86
RC3H1Q5TC82 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RC3H1Q5TC82 ZNF658B-202ENST00000615961 3375 ntBASIC3.45□□□□□ -1.86
RC3H1Q5TC82 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RC3H1Q5TC82 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RC3H1Q5TC82 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RC3H1Q5TC82 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RC3H1Q5TC82 Y_RNA.565-201ENST00000384719 101 ntBASIC3.44□□□□□ -1.86
RC3H1Q5TC82 IGLV3-17-201ENST00000519099 244 ntBASIC3.44□□□□□ -1.86
RC3H1Q5TC82 MIR7515-201ENST00000637837 67 ntBASIC3.44□□□□□ -1.86
RC3H1Q5TC82 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RC3H1Q5TC82 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
RC3H1Q5TC82 MIR26A1-201ENST00000362205 77 ntBASIC3.43□□□□□ -1.86
RC3H1Q5TC82 SNORD114-6-201ENST00000364393 72 ntBASIC3.43□□□□□ -1.86
RC3H1Q5TC82 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
RC3H1Q5TC82 snoU13.15-201ENST00000459407 104 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms