Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RNU6-762P-201ENST00000517107 102 ntBASIC2.9□□□□□ -1.95
EPHA4P54764 AL513534.2-201ENST00000603836 250 ntBASIC2.9□□□□□ -1.95
EPHA4P54764 AL513423.1-201ENST00000621695 132 ntBASIC2.9□□□□□ -1.95
EPHA4P54764 AL137790.1-201ENST00000634283 177 ntBASIC2.9□□□□□ -1.95
EPHA4P54764 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
EPHA4P54764 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.89□□□□□ -1.95
EPHA4P54764 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
EPHA4P54764 SNORA22.1-201ENST00000362701 134 ntBASIC2.89□□□□□ -1.95
EPHA4P54764 RNU4-67P-201ENST00000364569 141 ntBASIC2.89□□□□□ -1.95
EPHA4P54764 SNORA46-201ENST00000384762 135 ntBASIC2.89□□□□□ -1.95
EPHA4P54764 MIR518A2-201ENST00000384966 87 ntBASIC2.89□□□□□ -1.95
EPHA4P54764 SNORA48.1-201ENST00000390879 135 ntBASIC2.89□□□□□ -1.95
EPHA4P54764 AL139132.1-201ENST00000431587 344 ntBASIC2.89□□□□□ -1.95
EPHA4P54764 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.89□□□□□ -1.95
EPHA4P54764 AC064859.1-201ENST00000624741 174 ntBASIC2.89□□□□□ -1.95
EPHA4P54764 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
EPHA4P54764 Y_RNA.96-201ENST00000363092 109 ntBASIC2.88□□□□□ -1.95
EPHA4P54764 RNU6-1099P-201ENST00000363533 107 ntBASIC2.88□□□□□ -1.95
EPHA4P54764 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
EPHA4P54764 MIR1283-2-201ENST00000408621 87 ntBASIC2.88□□□□□ -1.95
EPHA4P54764 RNA5SP274-201ENST00000410484 108 ntBASIC2.88□□□□□ -1.95
EPHA4P54764 RPL23AP63-201ENST00000498752 471 ntBASIC2.88□□□□□ -1.95
EPHA4P54764 AC006023.1-201ENST00000603944 259 ntBASIC2.88□□□□□ -1.95
EPHA4P54764 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
EPHA4P54764 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.87□□□□□ -1.95
EPHA4P54764 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
EPHA4P54764 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
EPHA4P54764 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
EPHA4P54764 SNORA9.2-201ENST00000365361 133 ntBASIC2.87□□□□□ -1.95
EPHA4P54764 RNY1P7-201ENST00000384743 110 ntBASIC2.87□□□□□ -1.95
EPHA4P54764 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.87□□□□□ -1.95
EPHA4P54764 PGBD4P5-201ENST00000445958 426 ntBASIC2.87□□□□□ -1.95
EPHA4P54764 snoU13.27-201ENST00000459278 104 ntBASIC2.87□□□□□ -1.95
EPHA4P54764 SNORA59A-201ENST00000459326 152 ntBASIC2.87□□□□□ -1.95
EPHA4P54764 RNU7-45P-201ENST00000459460 63 ntBASIC2.87□□□□□ -1.95
EPHA4P54764 RN7SL20P-201ENST00000488827 297 ntBASIC2.87□□□□□ -1.95
EPHA4P54764 RNA5SP33-201ENST00000516687 98 ntBASIC2.87□□□□□ -1.95
EPHA4P54764 RNU6-56P-201ENST00000516986 93 ntBASIC2.87□□□□□ -1.95
EPHA4P54764 AC095038.3-201ENST00000634439 195 ntBASIC2.87□□□□□ -1.95
EPHA4P54764 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.87□□□□□ -1.95
EPHA4P54764 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
EPHA4P54764 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
EPHA4P54764 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.87□□□□□ -1.95
EPHA4P54764 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
EPHA4P54764 RNU6-1134P-201ENST00000365156 101 ntBASIC2.86□□□□□ -1.95
EPHA4P54764 Y_RNA.342-201ENST00000365352 113 ntBASIC2.86□□□□□ -1.95
EPHA4P54764 Y_RNA.360-201ENST00000365512 102 ntBASIC2.86□□□□□ -1.95
EPHA4P54764 Y_RNA.510-201ENST00000384511 114 ntBASIC2.86□□□□□ -1.95
EPHA4P54764 MIR660-201ENST00000385235 97 ntBASIC2.86□□□□□ -1.95
EPHA4P54764 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.86□□□□□ -1.95
EPHA4P54764 RNVU1-2-201ENST00000516326 135 ntBASIC2.86□□□□□ -1.95
EPHA4P54764 MIR1255B1-201ENST00000636325 63 ntBASIC2.86□□□□□ -1.95
EPHA4P54764 SNORD115-2-201ENST00000362842 82 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 RNU6-832P-201ENST00000363319 107 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 Y_RNA.171-201ENST00000363760 102 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 SNORD115-20-201ENST00000365099 82 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 RNU1-51P-201ENST00000365345 176 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 SNORA18-201ENST00000384416 132 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 MIR450A2-201ENST00000385022 100 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 AC093850.1-201ENST00000454121 251 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 SNORA31.4-201ENST00000516049 129 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 SCARNA16.3-201ENST00000516595 184 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 ELOCP29-201ENST00000588193 334 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 AL033523.1-201ENST00000605153 153 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 AC243994.1-201ENST00000618627 109 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 U1.36-201ENST00000620684 176 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 SNORD3E-202ENST00000627253 216 ntBASIC2.85□□□□□ -1.95
EPHA4P54764 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
EPHA4P54764 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
EPHA4P54764 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
EPHA4P54764 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.84□□□□□ -1.95
EPHA4P54764 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
EPHA4P54764 RNU6-820P-201ENST00000384273 107 ntBASIC2.84□□□□□ -1.95
EPHA4P54764 Y_RNA.466-201ENST00000384294 113 ntBASIC2.84□□□□□ -1.95
EPHA4P54764 HMGN2P39-201ENST00000398005 273 ntBASIC2.84□□□□□ -1.95
EPHA4P54764 RNA5SP270-201ENST00000411361 118 ntBASIC2.84□□□□□ -1.95
EPHA4P54764 RNU7-73P-201ENST00000458743 63 ntBASIC2.84□□□□□ -1.95
EPHA4P54764 SNORD123-201ENST00000459473 70 ntBASIC2.84□□□□□ -1.95
EPHA4P54764 RN7SL499P-201ENST00000481141 276 ntBASIC2.84□□□□□ -1.95
EPHA4P54764 RNA5SP367-201ENST00000516557 118 ntBASIC2.84□□□□□ -1.95
EPHA4P54764 Y_RNA.773-201ENST00000607168 90 ntBASIC2.84□□□□□ -1.95
EPHA4P54764 AC021506.2-201ENST00000612354 169 ntBASIC2.84□□□□□ -1.95
EPHA4P54764 AC007318.2-201ENST00000620999 243 ntBASIC2.84□□□□□ -1.95
EPHA4P54764 U8.9-201ENST00000365667 134 ntBASIC2.83□□□□□ -1.96
EPHA4P54764 Y_RNA.388-201ENST00000383919 113 ntBASIC2.83□□□□□ -1.96
EPHA4P54764 Y_RNA.430-201ENST00000384081 110 ntBASIC2.83□□□□□ -1.96
EPHA4P54764 SNORA24-201ENST00000384096 131 ntBASIC2.83□□□□□ -1.96
EPHA4P54764 RNA5SP437-201ENST00000517249 129 ntBASIC2.83□□□□□ -1.96
EPHA4P54764 SUB1P4-201ENST00000566062 339 ntBASIC2.83□□□□□ -1.96
EPHA4P54764 MIR4791-201ENST00000607666 84 ntBASIC2.83□□□□□ -1.96
EPHA4P54764 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
EPHA4P54764 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
EPHA4P54764 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
EPHA4P54764 SNORA5B-201ENST00000363786 132 ntBASIC2.82□□□□□ -1.96
EPHA4P54764 SNORD45B-201ENST00000364617 72 ntBASIC2.82□□□□□ -1.96
EPHA4P54764 MIR577-201ENST00000385196 96 ntBASIC2.82□□□□□ -1.96
EPHA4P54764 SNORA7.5-201ENST00000410672 110 ntBASIC2.82□□□□□ -1.96
EPHA4P54764 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.82□□□□□ -1.96
EPHA4P54764 AC026421.1-201ENST00000519101 163 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms