Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SNORD38.1-201ENST00000363863 68 ntBASIC2.99□□□□□ -1.93
RNF144AP50876 RNU1-33P-201ENST00000364249 162 ntBASIC2.99□□□□□ -1.93
RNF144AP50876 RNU6-1163P-201ENST00000364516 107 ntBASIC2.99□□□□□ -1.93
RNF144AP50876 RNU6-950P-201ENST00000384651 107 ntBASIC2.99□□□□□ -1.93
RNF144AP50876 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF144AP50876 MIR5094-201ENST00000578766 85 ntBASIC2.99□□□□□ -1.93
RNF144AP50876 AL020996.3-201ENST00000606617 222 ntBASIC2.99□□□□□ -1.93
RNF144AP50876 AC243994.1-201ENST00000618627 109 ntBASIC2.99□□□□□ -1.93
RNF144AP50876 SNORD3E-202ENST00000627253 216 ntBASIC2.99□□□□□ -1.93
RNF144AP50876 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RNF144AP50876 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF144AP50876 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF144AP50876 SNORD46.1-201ENST00000364139 104 ntBASIC2.98□□□□□ -1.93
RNF144AP50876 SNORA24-201ENST00000384096 131 ntBASIC2.98□□□□□ -1.93
RNF144AP50876 RNVU1-14-201ENST00000384770 164 ntBASIC2.98□□□□□ -1.93
RNF144AP50876 MIR34B-201ENST00000385076 84 ntBASIC2.98□□□□□ -1.93
RNF144AP50876 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RNF144AP50876 RNU6-913P-201ENST00000390913 95 ntBASIC2.98□□□□□ -1.93
RNF144AP50876 RNA5SP229-201ENST00000410809 99 ntBASIC2.98□□□□□ -1.93
RNF144AP50876 RNU7-73P-201ENST00000458743 63 ntBASIC2.98□□□□□ -1.93
RNF144AP50876 RNU1-143P-201ENST00000516296 146 ntBASIC2.98□□□□□ -1.93
RNF144AP50876 U1.23-201ENST00000610293 146 ntBASIC2.98□□□□□ -1.93
RNF144AP50876 RNU1-68P-201ENST00000615382 146 ntBASIC2.98□□□□□ -1.93
RNF144AP50876 U1.39-201ENST00000621562 146 ntBASIC2.98□□□□□ -1.93
RNF144AP50876 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
RNF144AP50876 RNU1-58P-201ENST00000362413 163 ntBASIC2.97□□□□□ -1.93
RNF144AP50876 AL445685.2-201ENST00000422551 342 ntBASIC2.97□□□□□ -1.93
RNF144AP50876 RPS29P28-201ENST00000446439 141 ntBASIC2.97□□□□□ -1.93
RNF144AP50876 RNU6-826P-201ENST00000516827 104 ntBASIC2.97□□□□□ -1.93
RNF144AP50876 RNU6-1006P-201ENST00000516998 103 ntBASIC2.97□□□□□ -1.93
RNF144AP50876 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.97□□□□□ -1.93
RNF144AP50876 MIR7975-201ENST00000619350 68 ntBASIC2.97□□□□□ -1.93
RNF144AP50876 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF144AP50876 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF144AP50876 AC005336.3-201ENST00000623833 2679 ntBASIC2.97□□□□□ -1.93
RNF144AP50876 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.97□□□□□ -1.93
RNF144AP50876 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF144AP50876 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF144AP50876 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RNF144AP50876 MIR887-201ENST00000401258 79 ntBASIC2.96□□□□□ -1.94
RNF144AP50876 AC093850.1-201ENST00000454121 251 ntBASIC2.96□□□□□ -1.94
RNF144AP50876 AC091153.1-201ENST00000466297 402 ntBASIC2.96□□□□□ -1.94
RNF144AP50876 RNU6-56P-201ENST00000516986 93 ntBASIC2.96□□□□□ -1.94
RNF144AP50876 MIR548AR-201ENST00000582191 57 ntBASIC2.96□□□□□ -1.94
RNF144AP50876 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF144AP50876 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF144AP50876 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF144AP50876 Y_RNA.316-201ENST00000365118 111 ntBASIC2.95□□□□□ -1.94
RNF144AP50876 MIR206-201ENST00000384872 86 ntBASIC2.95□□□□□ -1.94
RNF144AP50876 snoU13.22-201ENST00000459428 104 ntBASIC2.95□□□□□ -1.94
RNF144AP50876 MIR2682-201ENST00000580305 110 ntBASIC2.95□□□□□ -1.94
RNF144AP50876 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.95□□□□□ -1.94
RNF144AP50876 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RNF144AP50876 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF144AP50876 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
RNF144AP50876 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF144AP50876 RNU6-342P-201ENST00000384521 104 ntBASIC2.94□□□□□ -1.94
RNF144AP50876 RNU6-1031P-201ENST00000384773 107 ntBASIC2.94□□□□□ -1.94
RNF144AP50876 SNORD28B-201ENST00000390993 75 ntBASIC2.94□□□□□ -1.94
RNF144AP50876 AC245047.7-201ENST00000440265 293 ntBASIC2.94□□□□□ -1.94
RNF144AP50876 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF144AP50876 SNORD123-201ENST00000459473 70 ntBASIC2.94□□□□□ -1.94
RNF144AP50876 AC139453.2-201ENST00000487255 133 ntBASIC2.94□□□□□ -1.94
RNF144AP50876 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.94□□□□□ -1.94
RNF144AP50876 SEPT14P17-201ENST00000617978 177 ntBASIC2.94□□□□□ -1.94
RNF144AP50876 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
RNF144AP50876 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.94□□□□□ -1.94
RNF144AP50876 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF144AP50876 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
RNF144AP50876 Y_RNA.567-201ENST00000384736 106 ntBASIC2.93□□□□□ -1.94
RNF144AP50876 RNU6-1067P-201ENST00000384752 107 ntBASIC2.93□□□□□ -1.94
RNF144AP50876 MIR34C-201ENST00000384831 77 ntBASIC2.93□□□□□ -1.94
RNF144AP50876 MIR29C-201ENST00000385231 88 ntBASIC2.93□□□□□ -1.94
RNF144AP50876 BX510359.4-201ENST00000423750 193 ntBASIC2.93□□□□□ -1.94
RNF144AP50876 HMGN1P33-201ENST00000432945 451 ntBASIC2.93□□□□□ -1.94
RNF144AP50876 AC022202.1-201ENST00000613515 211 ntBASIC2.93□□□□□ -1.94
RNF144AP50876 MIR7112-201ENST00000616126 65 ntBASIC2.93□□□□□ -1.94
RNF144AP50876 AL449363.1-201ENST00000617815 186 ntBASIC2.93□□□□□ -1.94
RNF144AP50876 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.93□□□□□ -1.94
RNF144AP50876 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF144AP50876 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RNF144AP50876 AC093831.2-201ENST00000624393 3427 ntBASIC2.93□□□□□ -1.94
RNF144AP50876 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
RNF144AP50876 SNORD67-201ENST00000390833 111 ntBASIC2.92□□□□□ -1.94
RNF144AP50876 RNU6-1307P-201ENST00000391012 103 ntBASIC2.92□□□□□ -1.94
RNF144AP50876 MIR889-201ENST00000401280 79 ntBASIC2.92□□□□□ -1.94
RNF144AP50876 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.92□□□□□ -1.94
RNF144AP50876 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.92□□□□□ -1.94
RNF144AP50876 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.92□□□□□ -1.94
RNF144AP50876 AC005326.1-201ENST00000429197 123 ntBASIC2.92□□□□□ -1.94
RNF144AP50876 BX510359.1-201ENST00000456973 237 ntBASIC2.92□□□□□ -1.94
RNF144AP50876 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RNF144AP50876 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
RNF144AP50876 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RNF144AP50876 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RNF144AP50876 MIR208A-201ENST00000362287 71 ntBASIC2.91□□□□□ -1.94
RNF144AP50876 Y_RNA.94-201ENST00000363068 106 ntBASIC2.91□□□□□ -1.94
RNF144AP50876 RNU6-1244P-201ENST00000363614 108 ntBASIC2.91□□□□□ -1.94
RNF144AP50876 RNU6-865P-201ENST00000364772 107 ntBASIC2.91□□□□□ -1.94
RNF144AP50876 SNORA70.4-201ENST00000365509 134 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms