Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXD11P31277 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD11P31277 RNU1-91P-201ENST00000364746 163 ntBASIC4.5□□□□□ -1.69
HOXD11P31277 SNORD21-201ENST00000383953 95 ntBASIC4.5□□□□□ -1.69
HOXD11P31277 MIR659-201ENST00000384963 97 ntBASIC4.5□□□□□ -1.69
HOXD11P31277 SNORA75.1-201ENST00000391130 148 ntBASIC4.5□□□□□ -1.69
HOXD11P31277 DEFB122-202ENST00000569013 197 ntBASIC4.5□□□□□ -1.69
HOXD11P31277 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD11P31277 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXD11P31277 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD11P31277 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD11P31277 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD11P31277 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD11P31277 RNU6-1123P-201ENST00000362347 106 ntBASIC4.49□□□□□ -1.69
HOXD11P31277 RNU6-520P-201ENST00000384717 104 ntBASIC4.49□□□□□ -1.69
HOXD11P31277 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXD11P31277 AC004552.1-201ENST00000419089 348 ntBASIC4.49□□□□□ -1.69
HOXD11P31277 RPS26P3-201ENST00000470205 348 ntBASIC4.49□□□□□ -1.69
HOXD11P31277 AC090543.2-201ENST00000483963 348 ntBASIC4.49□□□□□ -1.69
HOXD11P31277 AC004057.1-201ENST00000485827 348 ntBASIC4.49□□□□□ -1.69
HOXD11P31277 AL606490.9-201ENST00000603331 271 ntBASIC4.49□□□□□ -1.69
HOXD11P31277 uc_338.6-201ENST00000613544 171 ntBASIC4.49□□□□□ -1.69
HOXD11P31277 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HOXD11P31277 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD11P31277 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD11P31277 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HOXD11P31277 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HOXD11P31277 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HOXD11P31277 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD11P31277 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD11P31277 RNU4ATAC16P-201ENST00000408512 126 ntBASIC4.48□□□□□ -1.69
HOXD11P31277 RNA5SP293-201ENST00000410527 113 ntBASIC4.48□□□□□ -1.69
HOXD11P31277 AC104332.2-201ENST00000429959 156 ntBASIC4.48□□□□□ -1.69
HOXD11P31277 RNU7-24P-201ENST00000458867 62 ntBASIC4.48□□□□□ -1.69
HOXD11P31277 RNU7-26P-201ENST00000458980 63 ntBASIC4.48□□□□□ -1.69
HOXD11P31277 AC008885.1-201ENST00000514930 301 ntBASIC4.48□□□□□ -1.69
HOXD11P31277 RNU6-902P-201ENST00000517212 91 ntBASIC4.48□□□□□ -1.69
HOXD11P31277 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD11P31277 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD11P31277 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HOXD11P31277 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD11P31277 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD11P31277 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXD11P31277 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD11P31277 AC073325.2-201ENST00000339545 159 ntBASIC4.47□□□□□ -1.69
HOXD11P31277 AL138878.1-201ENST00000405131 347 ntBASIC4.47□□□□□ -1.69
HOXD11P31277 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD11P31277 RNU1-95P-201ENST00000516357 160 ntBASIC4.47□□□□□ -1.69
HOXD11P31277 RNU1-128P-201ENST00000516704 160 ntBASIC4.47□□□□□ -1.69
HOXD11P31277 SCN1A-220ENST00000641603 12506 ntBASIC4.47□□□□□ -1.69
HOXD11P31277 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD11P31277 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
HOXD11P31277 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.46□□□□□ -1.69
HOXD11P31277 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXD11P31277 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXD11P31277 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXD11P31277 SNORA5A-201ENST00000384111 134 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 MIR653-201ENST00000385279 96 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 RNU1-82P-201ENST00000390851 165 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 SNORA48.1-201ENST00000390879 135 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 MIR1302-7-201ENST00000408841 72 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 AL157831.1-201ENST00000426134 473 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 HMGN2P3-201ENST00000433603 273 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 HMGN2P5-201ENST00000436882 273 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 AC025518.1-201ENST00000479856 347 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 AC138907.6-201ENST00000568401 126 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 AC138869.1-201ENST00000568623 124 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 MIR548V-201ENST00000584165 80 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 AC113403.1-201ENST00000604910 193 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 AL022401.1-201ENST00000619498 108 ntBASIC4.46□□□□□ -1.7
HOXD11P31277 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXD11P31277 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXD11P31277 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXD11P31277 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HOXD11P31277 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
HOXD11P31277 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD11P31277 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD11P31277 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD11P31277 RNA5SP39-201ENST00000411245 120 ntBASIC4.45□□□□□ -1.7
HOXD11P31277 Z74021.1-201ENST00000423610 407 ntBASIC4.45□□□□□ -1.7
HOXD11P31277 AC108751.2-201ENST00000469993 231 ntBASIC4.45□□□□□ -1.7
HOXD11P31277 RN7SL293P-201ENST00000481765 281 ntBASIC4.45□□□□□ -1.7
HOXD11P31277 RNU6-1265P-201ENST00000516342 103 ntBASIC4.45□□□□□ -1.7
HOXD11P31277 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD11P31277 MAPK10-286ENST00000641208 8747 ntBASIC4.45□□□□□ -1.7
HOXD11P31277 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD11P31277 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD11P31277 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD11P31277 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD11P31277 AL136164.3-201ENST00000624429 3978 ntBASIC4.44□□□□□ -1.7
HOXD11P31277 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HOXD11P31277 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD11P31277 RNU1-18P-201ENST00000363062 164 ntBASIC4.44□□□□□ -1.7
HOXD11P31277 SNORD96B-201ENST00000386148 79 ntBASIC4.44□□□□□ -1.7
HOXD11P31277 MIR18B-201ENST00000454574 71 ntBASIC4.44□□□□□ -1.7
HOXD11P31277 RN7SL517P-201ENST00000462240 305 ntBASIC4.44□□□□□ -1.7
HOXD11P31277 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD11P31277 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD11P31277 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD11P31277 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 306.5 ms