Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SNORA26.6-201ENST00000391256 115 ntBASIC3.26□□□□□ -1.89
VARSP26640 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.26□□□□□ -1.89
VARSP26640 RNA5SP261-201ENST00000410536 106 ntBASIC3.26□□□□□ -1.89
VARSP26640 SNORA31.10-201ENST00000516482 106 ntBASIC3.26□□□□□ -1.89
VARSP26640 RNU7-53P-201ENST00000516705 60 ntBASIC3.26□□□□□ -1.89
VARSP26640 MIR4791-201ENST00000607666 84 ntBASIC3.26□□□□□ -1.89
VARSP26640 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.26□□□□□ -1.89
VARSP26640 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VARSP26640 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VARSP26640 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.26□□□□□ -1.89
VARSP26640 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VARSP26640 AL442644.1-201ENST00000454390 3105 ntBASIC3.25□□□□□ -1.89
VARSP26640 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.25□□□□□ -1.89
VARSP26640 RNU6-1163P-201ENST00000364516 107 ntBASIC3.25□□□□□ -1.89
VARSP26640 Y_RNA.316-201ENST00000365118 111 ntBASIC3.25□□□□□ -1.89
VARSP26640 SNORA48.2-201ENST00000390926 124 ntBASIC3.25□□□□□ -1.89
VARSP26640 U8.16-201ENST00000391279 133 ntBASIC3.25□□□□□ -1.89
VARSP26640 SNORA26.7-201ENST00000391288 122 ntBASIC3.25□□□□□ -1.89
VARSP26640 RNU6-1190P-201ENST00000410811 104 ntBASIC3.25□□□□□ -1.89
VARSP26640 AC092427.1-202ENST00000430569 476 ntBASIC3.25□□□□□ -1.89
VARSP26640 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.25□□□□□ -1.89
VARSP26640 DNAJC19P9-201ENST00000555084 351 ntBASIC3.25□□□□□ -1.89
VARSP26640 MIR4325-201ENST00000583049 90 ntBASIC3.25□□□□□ -1.89
VARSP26640 MIR6717-201ENST00000622747 73 ntBASIC3.25□□□□□ -1.89
VARSP26640 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.25□□□□□ -1.89
VARSP26640 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VARSP26640 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VARSP26640 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VARSP26640 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VARSP26640 AC007336.1-201ENST00000576365 3828 ntBASIC3.24□□□□□ -1.89
VARSP26640 AC093831.2-201ENST00000624393 3427 ntBASIC3.24□□□□□ -1.89
VARSP26640 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VARSP26640 AC005336.3-201ENST00000623833 2679 ntBASIC3.24□□□□□ -1.89
VARSP26640 RNU6-833P-201ENST00000363486 107 ntBASIC3.24□□□□□ -1.89
VARSP26640 SNORD56.5-201ENST00000364281 72 ntBASIC3.24□□□□□ -1.89
VARSP26640 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.24□□□□□ -1.89
VARSP26640 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.24□□□□□ -1.89
VARSP26640 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
VARSP26640 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VARSP26640 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
VARSP26640 Y_RNA.140-201ENST00000363474 103 ntBASIC3.23□□□□□ -1.89
VARSP26640 RPS29P29-201ENST00000456396 171 ntBASIC3.23□□□□□ -1.89
VARSP26640 RNU7-2P-201ENST00000516096 62 ntBASIC3.23□□□□□ -1.89
VARSP26640 SCARNA20.6-201ENST00000517251 106 ntBASIC3.23□□□□□ -1.89
VARSP26640 AC073476.4-201ENST00000628409 72 ntBASIC3.23□□□□□ -1.89
VARSP26640 AP000648.3-201ENST00000623539 4507 ntBASIC3.23□□□□□ -1.89
VARSP26640 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VARSP26640 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VARSP26640 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.22□□□□□ -1.89
VARSP26640 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VARSP26640 Y_RNA.94-201ENST00000363068 106 ntBASIC3.22□□□□□ -1.89
VARSP26640 SNORD115-3-201ENST00000363100 82 ntBASIC3.22□□□□□ -1.89
VARSP26640 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VARSP26640 RNU6-788P-201ENST00000390967 104 ntBASIC3.22□□□□□ -1.89
VARSP26640 RNU7-12P-201ENST00000516030 62 ntBASIC3.22□□□□□ -1.89
VARSP26640 RNU1-143P-201ENST00000516296 146 ntBASIC3.22□□□□□ -1.89
VARSP26640 RNU6-1006P-201ENST00000516998 103 ntBASIC3.22□□□□□ -1.89
VARSP26640 U1.23-201ENST00000610293 146 ntBASIC3.22□□□□□ -1.89
VARSP26640 RNU1-68P-201ENST00000615382 146 ntBASIC3.22□□□□□ -1.89
VARSP26640 U1.39-201ENST00000621562 146 ntBASIC3.22□□□□□ -1.89
VARSP26640 AC022513.1-201ENST00000624512 117 ntBASIC3.22□□□□□ -1.89
VARSP26640 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.22□□□□□ -1.89
VARSP26640 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
VARSP26640 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VARSP26640 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
VARSP26640 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
VARSP26640 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
VARSP26640 RNU1-70P-201ENST00000362618 164 ntBASIC3.21□□□□□ -1.9
VARSP26640 SNORD38.1-201ENST00000363863 68 ntBASIC3.21□□□□□ -1.9
VARSP26640 MIR128-1-201ENST00000384921 82 ntBASIC3.21□□□□□ -1.9
VARSP26640 RNU4-47P-201ENST00000410876 114 ntBASIC3.21□□□□□ -1.9
VARSP26640 HSPE1P9-201ENST00000440046 311 ntBASIC3.21□□□□□ -1.9
VARSP26640 RNA5SP168-201ENST00000516642 112 ntBASIC3.21□□□□□ -1.9
VARSP26640 SEPT14P17-201ENST00000617978 177 ntBASIC3.21□□□□□ -1.9
VARSP26640 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.21□□□□□ -1.9
VARSP26640 RNU6-913P-201ENST00000390913 95 ntBASIC3.2□□□□□ -1.9
VARSP26640 AL034345.1-201ENST00000407768 123 ntBASIC3.2□□□□□ -1.9
VARSP26640 AL445685.2-201ENST00000422551 342 ntBASIC3.2□□□□□ -1.9
VARSP26640 MIR5680-201ENST00000577577 84 ntBASIC3.2□□□□□ -1.9
VARSP26640 MIR4276-201ENST00000584832 70 ntBASIC3.2□□□□□ -1.9
VARSP26640 AL020996.3-201ENST00000606617 222 ntBASIC3.2□□□□□ -1.9
VARSP26640 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VARSP26640 U8.9-201ENST00000365667 134 ntBASIC3.19□□□□□ -1.9
VARSP26640 MIR206-201ENST00000384872 86 ntBASIC3.19□□□□□ -1.9
VARSP26640 RNA5SP344-201ENST00000411081 104 ntBASIC3.19□□□□□ -1.9
VARSP26640 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.19□□□□□ -1.9
VARSP26640 RPS29P28-201ENST00000446439 141 ntBASIC3.19□□□□□ -1.9
VARSP26640 RN7SL75P-201ENST00000461926 281 ntBASIC3.19□□□□□ -1.9
VARSP26640 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.19□□□□□ -1.9
VARSP26640 RNU6-826P-201ENST00000516827 104 ntBASIC3.19□□□□□ -1.9
VARSP26640 MIR5004-201ENST00000579078 107 ntBASIC3.19□□□□□ -1.9
VARSP26640 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.19□□□□□ -1.9
VARSP26640 uc_338.1-201ENST00000612113 180 ntBASIC3.19□□□□□ -1.9
VARSP26640 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VARSP26640 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VARSP26640 RNU6-1019P-201ENST00000364424 107 ntBASIC3.18□□□□□ -1.9
VARSP26640 SNORD115-27-201ENST00000364430 82 ntBASIC3.18□□□□□ -1.9
VARSP26640 MIR136-201ENST00000385207 82 ntBASIC3.18□□□□□ -1.9
VARSP26640 RNU6-1307P-201ENST00000391012 103 ntBASIC3.18□□□□□ -1.9
VARSP26640 CST9LP2-201ENST00000437612 320 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 317.1 ms