Protein–RNA interactions for Protein: P10600

TGFB3, Transforming growth factor beta-3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3P10600 MIR548A2-201ENST00000384956 97 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TGFB3P10600 SNORA75.5-201ENST00000391291 81 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 RNA5SP100-201ENST00000410903 110 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 RNA5SP59-201ENST00000410922 110 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 AC099677.2-201ENST00000436385 175 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 AL357134.1-201ENST00000445848 426 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 snoU13.9-201ENST00000458927 103 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 Y_RNA.651-201ENST00000459380 103 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 AC011406.1-201ENST00000512440 370 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 RNU6-772P-201ENST00000516042 105 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.87□□□□□ -2.11
TGFB3P10600 MIR3169-201ENST00000578032 83 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 MIR3646-201ENST00000578301 84 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 AC108081.1-201ENST00000604358 221 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 MIR338-201ENST00000636369 67 ntBASIC1.87□□□□□ -2.11
TGFB3P10600 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
TGFB3P10600 Y_RNA.432-201ENST00000384087 111 ntBASIC1.86□□□□□ -2.11
TGFB3P10600 RNY3P5-201ENST00000384127 102 ntBASIC1.86□□□□□ -2.11
TGFB3P10600 RNU6-376P-201ENST00000384731 106 ntBASIC1.86□□□□□ -2.11
TGFB3P10600 RNY4P18-201ENST00000391107 89 ntBASIC1.86□□□□□ -2.11
TGFB3P10600 SNORD33.1-201ENST00000516213 88 ntBASIC1.86□□□□□ -2.11
TGFB3P10600 RNU7-116P-201ENST00000516940 62 ntBASIC1.86□□□□□ -2.11
TGFB3P10600 MIR4498-201ENST00000577599 66 ntBASIC1.86□□□□□ -2.11
TGFB3P10600 AC097639.2-201ENST00000603159 172 ntBASIC1.86□□□□□ -2.11
TGFB3P10600 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.85□□□□□ -2.11
TGFB3P10600 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.85□□□□□ -2.11
TGFB3P10600 ICE2P2-201ENST00000483823 2787 ntBASIC1.85□□□□□ -2.11
TGFB3P10600 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
TGFB3P10600 MIR424-201ENST00000362227 98 ntBASIC1.85□□□□□ -2.11
TGFB3P10600 snoU2-30.2-201ENST00000362805 70 ntBASIC1.85□□□□□ -2.11
TGFB3P10600 Y_RNA.253-201ENST00000364562 112 ntBASIC1.85□□□□□ -2.11
TGFB3P10600 Y_RNA.273-201ENST00000364703 102 ntBASIC1.85□□□□□ -2.11
TGFB3P10600 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.85□□□□□ -2.11
TGFB3P10600 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.85□□□□□ -2.11
TGFB3P10600 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TGFB3P10600 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.84□□□□□ -2.11
TGFB3P10600 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
TGFB3P10600 Y_RNA.52-201ENST00000362760 96 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 Y_RNA.563-201ENST00000384707 108 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 Y_RNA.584-201ENST00000391090 114 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 RNA5SP496-201ENST00000391240 109 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 AC008134.1-201ENST00000420943 193 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 AC233266.1-201ENST00000454518 96 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 Y_RNA.666-201ENST00000516187 112 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 RNU6-1299P-201ENST00000516316 100 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 MIR3121-201ENST00000579680 77 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 AL359881.1-201ENST00000602916 267 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 U7.2-201ENST00000607576 63 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 AC242852.1-201ENST00000612151 96 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 Pinc.1-201ENST00000616452 154 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 AC244015.1-201ENST00000622301 99 ntBASIC1.84□□□□□ -2.11
TGFB3P10600 SNORA1B-201ENST00000362535 133 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 SNORD33-201ENST00000362761 85 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 Y_RNA.114-201ENST00000363265 113 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 SNORD61-201ENST00000384252 73 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 BTF3P4-201ENST00000418852 495 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 RNU6-919P-201ENST00000516731 104 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 Y_RNA.712-201ENST00000517011 92 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 RNU6-1270P-201ENST00000517128 108 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 MIR3129-201ENST00000581095 76 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 AL591926.4-201ENST00000616895 298 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 TUG1_4.1-201ENST00000619464 181 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 AC006435.5-201ENST00000624486 112 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 MIR3914-2-201ENST00000637339 95 ntBASIC1.83□□□□□ -2.12
TGFB3P10600 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TGFB3P10600 RNU6-862P-201ENST00000362804 105 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 Y_RNA.267-201ENST00000364679 109 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 MIR539-201ENST00000365690 78 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 MIR1267-201ENST00000408723 78 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 RNU4-62P-201ENST00000410125 130 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 Y_RNA.621-201ENST00000411065 96 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 AP1B1P2-201ENST00000416196 106 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 AC010154.1-201ENST00000425857 269 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 AL158147.1-201ENST00000443970 75 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 SUB1P4-201ENST00000566062 339 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 SNORD53B-201ENST00000577887 78 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 MIR4303-201ENST00000581299 66 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 AC022217.4-201ENST00000604389 163 ntBASIC1.82□□□□□ -2.12
TGFB3P10600 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
TGFB3P10600 RNU6-1298P-201ENST00000362456 101 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 Y_RNA.338-201ENST00000365320 114 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 RNU2-70P-201ENST00000410718 179 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 AC245517.4-201ENST00000448601 281 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 AL163195.1-201ENST00000496941 348 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 RNU5E-3P-201ENST00000515913 68 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 RNA5SP236-201ENST00000516169 116 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 RNVU1-2-201ENST00000516326 135 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 RNU2-34P-201ENST00000516534 121 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 RNU6-1116P-201ENST00000517269 99 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 snoU13.31-201ENST00000607291 104 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 MIR6079-201ENST00000635807 62 ntBASIC1.81□□□□□ -2.12
TGFB3P10600 RNU6-1138P-201ENST00000365359 106 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms